Contig 013975:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN030F07Sequence591013975 (2)ref|XP_004235021.1|2e-12PREDICTED: uncharacterized protein LOC101249438 isoform X1 [Solanum lycopersicu
JMSF025D06Sequence612014672ref|XP_006347514.1|95.9PREDICTED: uncharacterized protein LOC102588139 [Solanum tuberosum]830013975 (2)ref|XP_009761763.1|137PREDICTED: uncharacterized protein LOC104213904 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN030F07+                                                     ATGGTAAAAATCGAATGA
rJMSF025D06-                    AGATCGATTCGAACAGGAAACGATAACAGATGATGGTAAAAATCGAATGA
                      ____________________________________________________________
consensus                       AGATCGATTCGAACAGGAAACGATAACAGATGATGGTAAAAATCGAATGA
 
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JMFN030F07+           GACGTCAATGAAGAATGATNTAATCAATTNAAAATAGTTCTCAGAGTATTATAACTCAAA
rJMSF025D06-          GACGTCAATGAAGAATGATTTAATCAATTTAAAATAGTTCTCAGAGTATTATAACTCAAA
                      ____________________________________________________________
consensus             GACGTCAATGAAGAATGATTTAATCAATTTAAAATAGTTCTCAGAGTATTATAACTCAAA
 
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JMFN030F07+           CGCTTTAATTTGGCTTCCGACCTACCACCACCGGTGAAGTCCCGACTCCCCACCATCTCC
rJMSF025D06-          CGCTTTAATTTGGCTTCCGACCTACCACCACCGGTGAAGTCCCGACTCCCCACCATCTCC
                      ____________________________________________________________
consensus             CGCTTTAATTTGGCTTCCGACCTACCACCACCGGTGAAGTCCCGACTCCCCACCATCTCC
 
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JMFN030F07+           ATAGCTACGCTATGTTTCGATGTTGGCAAGATTGAACTCCCTCCCCGCAGTTTCACTTGA
rJMSF025D06-          ATAGCTACGCTATGTTTCGATGTTGGCAAGATTGAACTCCCTCCCCGCAGTTTCACTTGA
                      ____________________________________________________________
consensus             ATAGCTACGCTATGTTTCGATGTTGGCAAGATTGAACTCCCTCCCCGCAGTTTCACTTGA
 
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JMFN030F07+           AAACATCCTCAAGTCAGCTTCGGTGGGGGTCGATGATGATGAGATGACTTCAAGTTAGTC
rJMSF025D06-          AAACATCCTCAAGTCAGCTTCGGTGGGGGTCGATGATGATGAGATGACTTCAAGTTAGTC
                      ____________________________________________________________
consensus             AAACATCCTCAAGTCAGCTTCGGTGGGGGTCGATGATGATGAGATGACTTCAAGTTAGTC
 
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JMFN030F07+           TTGGGGATGCCAGTTCCACTCTTCTTACTTGCCGGAATGTTTTTTATGAGAACAACAGAT
rJMSF025D06-          TTGGGGATGCCAGTTCCACTCTTCTTACTTGCCGGAATGTTTTTTATGAGAACAAAAGAT
                      ____________________________________________________________
consensus             TTGGGGATGCCAGTTCCACTCTTCTTACTTGCCGGAATGTTTTTTATGAGAACAACAGAT
 
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JMFN030F07+           GAGTTTGCTTTCTTCAATGCAAAGTCTCTATGCTTCCTTTCAAGAGTCTGGCCAACACTA
rJMSF025D06-          GAGTTTGCTTTCTTCAATGCAAAGTCTCTATGCTTCCTTTCAAGAGTCTGGCCAACACTA
                      ____________________________________________________________
consensus             GAGTTTGCTTTCTTCAATGCAAAGTCTCTATGCTTCCTTTCAAGAGTCTGGCCAACACTA
 
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JMFN030F07+           TCTAATGTCTTTTTGCAGCCTTCTTCAAATTTATTCCCTGGTTGAAGTCCTTGGATAATG
rJMSF025D06-          TCTAATGTCTTTTTGCAGCCTTCTTCAAATTTATTCCCTGGTTGAAGTCCTTGGATAATG
                      ____________________________________________________________
consensus             TCTAATGTCTTTTTGCAGCCTTCTTCAAATTTATTCCCTGGTTGAAGTCCTTGGATAATG
 
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JMFN030F07+           TTTGAAATTTGAGTCTCTTCTCCATTCGAAACCTTGTGTTTCTTAATTCCACCGAAATTC
rJMSF025D06-          TTTGAAATTTGAGTCTCTTCTCCATTCGAAACCTTGTGTTTCTTAATTCCACCGAAATTC
                      ____________________________________________________________
consensus             TTTGAAATTTGAGTCTCTTCTCCATTCGAAACCTTGTGTTTCTTAATTCCACCGAAATTC
 
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JMFN030F07+           CCATCCTCGGCGGCGCCGCCATCATTGGCTTTCCTCTTCTTCTTCTTCTTCCCCAAATGT
rJMSF025D06-          CCATCCTCGGCGGCGCCGCCATCATTGGCTTTCCTCTTCTTCTTCTTCTTCCCCAAATGT
                      ____________________________________________________________
consensus             CCATCCTCGGCGGCGCCGCCATCATTGGCTTTCCTCTTCTTCTTCTTCTTCCCCAAATGT
 
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JMFN030F07+           ATCGTCGTCTTAGATCTCTTGTCGCGAACCTTC                           
rJMSF025D06-          ATCGTCGTCTTAGATCTCTTGTCGCGAACCTTCCACACATTCTTCTTTCTGAACAACAAT
                      ____________________________________________________________
consensus             ATCGTCGTCTTAGATCTCTTGTCGCGAACCTTCCACACATTCTTCTTTCTGAACAACAAT
 
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rJMSF025D06-          TTATCGCATTTCCATGGCGCACAGCTCGTGTCTATCACAGTAACCTCGCTCCGGGAAAAC
                      ____________________________________________________________
consensus             TTATCGCATTTCCATGGCGCACAGCTCGTGTCTATCACAGTAACCTCGCTCCGGGAAAAC
 
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rJMSF025D06-          CCAAATAAATGTGCATCTATCTTCTCCTCCTCCTCGCTTTGCTCCAGTAGCTTCATTTCC
                      ____________________________________________________________
consensus             CCAAATAAATGTGCATCTATCTTCTCCTCCTCCTCGCTTTGCTCCAGTAGCTTCATTTCC
 
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rJMSF025D06-          ACTCTACTTTGATCATCGCTCATCGGAGACGCGCTCTGGTCTTTCCCCCGGTCATCTCTG
                      ____________________________________________________________
consensus             ACTCTACTTTGATCATCGCTCATCGGAGACGCGCTCTGGTCTTTCCCCCGGTCATCTCTG