Contig 013972:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011P24Sequence252015693732013972 (3)ref|NP_001234504.1|9e-113wall-associated receptor kinase-like 14 precursor [Solanum lycopersicum]
JMSF024I19Sequence638022124ref|XP_009789522.1|2e-32PREDICTED: wall-associated receptor kinase-like 14 [Nicotiana sylvestris]780013972 (3)ref|NP_001234504.1|2e-115wall-associated receptor kinase-like 14 precursor [Solanum lycopersicum]
JMSF037O10Sequence556013972 (3)ref|XP_009630314.1|5e-49PREDICTED: wall-associated receptor kinase-like 14 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF024I19+                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF011P24+                                      ATTTGCAATGACAGATGACTCCCACATTTCCA
rJMSF024I19+          GAAGATAGCTGATTTCNGGGCTCTCGAGATTTGCAATGACAGATGACTCCCACATTTCCA
                      ____________________________________________________________
consensus             GAAGATAGCTGATTTCNGGGCTCTCGAGATTTGCAATGACAGATGACTCCCACATTTCCA
 
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rJMSF011P24+          CAGCACCGCAAGGGACCCCGGGCTACTTAGACCCTCAGTACCATCAAAATTACCATCTTT
rJMSF024I19+          CAGCACCGCAAGGGACCCCGGGCTACTTAGACCCTCAGTACCATCAAAATTACCATCTTT
                      ____________________________________________________________
consensus             CAGCACCGCAAGGGACCCCGGGCTACTTAGACCCTCAGTACCATCAAAATTACCATCTTT
 
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rJMSF011P24+          CTGACAAGAGCGACGTGTACAGCTTTGGGGTCGTGCTCGTGGAGATCATAACAGCTAAGA
rJMSF024I19+          CTGACAAGAGCGACGTGTACAGCTTTGGGGTCGTGCTCGTGGAGATCATAACAGCTAAGA
                      ____________________________________________________________
consensus             CTGACAAGAGCGACGTGTACAGCTTTGGGGTCGTGCTCGTGGAGATCATAACAGCTAAGA
 
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rJMSF037O10+                                 CACACCGAGATCAACNTGGCAGCCCTGGCAATAGACA
rJMSF011P24+          AAGTCGTGGACTTCTCCCGCCCCCACACCGAGATCAACCTGGCAGCCCTGGCAATCGACA
rJMSF024I19+          AAGTCGTGGACTTCTCCCGCCCCCACACCGAGATCAACCTGGCAGCCCTGGCAATCGACA
                      ____________________________________________________________
consensus             AAGTCGTGGACTTCTCCCGCCCCCACACCGAGATCAACCTGGCAGCCCTGGCAATCGACA
 
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rJMSF037O10+          GGATTGGGAAAGGGCACATGGACGANATAATCGATCCATATCTCGAGCCACATAGGGACG
rJMSF011P24+          GGATTGGGAAAGGGCACATGGACGAGATAATCGATCCATATCTCGAGCCACATAGGGACG
rJMSF024I19+          GGATTGGGAAAGGGCACATGGACGAGATAATCGATCCATATCTCGAGCCACATAGGGACG
                      ____________________________________________________________
consensus             GGATTGGGAAAGGGCACATGGACGAGATAATCGATCCATATCTCGAGCCACATAGGGACG
 
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rJMSF037O10+          CCTGGACACTTTCATCGATCCACAGGGTAGCGGAGCTGGCTTTCAGATGCCTCGCGTTCC
rJMSF011P24+          CCTGGACACTTTCATCGATCCACAGGGTAGCGGAGCTGGCTTTCAGATGCCTCGCGTTCC
rJMSF024I19+          CCTGGACACTTTCATCGATCCACAGGGTAGCGGAGCTGGCTTTCAGATGCCTCGCGTTCC
                      ____________________________________________________________
consensus             CCTGGACACTTTCATCGATCCACAGGGTAGCGGAGCTGGCTTTCAGATGCCTCGCGTTCC
 
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rJMSF037O10+          ACAAGGACATGAGCCCCTCAATGACAGAAGTGGCAGATGAACTGGAGCAAATCAGGNTCA
rJMSF011P24+          ACAAGGACATGAGGCCCTCAATGACAGAAGTGGCAGATGAACTGGAGCAAATCAGGCTCA
rJMSF024I19+          ACAAGGACATGAGGCCCTCAATGACAGAAGTGGCAGATGAACTGGAGCAAATCAGGCTCA
                      ____________________________________________________________
consensus             ACAAGGACATGAGGCCCTCAATGACAGAAGTGGCAGATGAACTGGAGCAAATCAGGCTCA
 
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rJMSF037O10+          GCGCTTGGGCTCCTGTNGAGGAAAACGTATGCANGANGTCCTCNGTCGCCTCGTCTTNCT
rJMSF011P24+          GCGCTTGGGCTCCTGTCGAGGAAAACGTATGCATGACGTCCTCAGTCGCCTCGTCTTGCT
rJMSF024I19+          GCGCTTGGGCTCCTGTCGAGGAAAACGTATGCATGACGTCCTCAGTCGCCTCGTCTTGCT
                      ____________________________________________________________
consensus             GCGCTTGGGCTCCTGTCGAGGAAAACGTATGCATGACGTCCTCAGTCGCCTCGTCTTGCT
 
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rJMSF037O10+          CCTCCCCACGCAATGGCAGCGAGAAATCGTTTGGTAGTTNGANTNAGAAAGGCGNGGTGG
rJMSF011P24+          CCTCCCCACGCAATGGCAGCGAGAAATCGTTTGGTAGTTCGACTAAGAAAGGCGGGGTGG
rJMSF024I19+          CCTCCCCACGCAATGGCAGCGAGAAATCGTTTGGTAGTTCGACTAAGAAAGGCGGGGTGG
                      ____________________________________________________________
consensus             CCTCCCCACGCAATGGCAGCGAGAAATCGTTTGGTAGTTCGACTAAGAAAGGCGGGGTGG
 
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rJMSF037O10+          GAAGTAGGAGGGTGATCCTCCCCCAGAAAGTCATCATTGNCCTGTCTNCCATGGAGGAAA
rJMSF011P24+          GAAGTAGGAGGGTGATCCTCCCCCAGAAAGTCATCATTGGCCTGTCTGCCATGGAGGAAA
rJMSF024I19+          GAAGTAGGAGGGTGATCCTCCCCCAGAAAGTCATCATTGGCCTGTCTGCCATGGAGGAAA
                      ____________________________________________________________
consensus             GAAGTAGGAGGGTGATCCTCCCCCAGAAAGTCATCATTGGCCTGTCTGCCATGGAGGAAA
 
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rJMSF037O10+          TTANGGATAGTTCTCCAGTTTCTGTGCNGGATCCATGNTCAAGTAAGGNCAGTTCTCCAG
rJMSF011P24+          TTAAGGATAGTTCTCCAGTTTCTGTGCAGGATCCATGGTCAAGTAAGGACAGTTCTCCAG
rJMSF024I19+          TTAAGGATAGTTCTCCAGTTTCTGTGCAGGATCCATGGTCAAGTAAGGACAGTTCTCCAG
                      ____________________________________________________________
consensus             TTAAGGATAGTTCTCCAGTTTCTGTGCAGGATCCATGGTCAAGTAAGGACAGTTCTCCAG
 
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rJMSF037O10+          CCAATACCTTAGCTGGGTAAATGAAACTGCTAGTNTAGAGTTTAGACACAACAA--TATA
rJMSF011P24+          CCAATACCTTA-CTGGGTAAATGAAACTGCTAGTTTAGAGTTTAGACACAACAATCTCTA
rJMSF024I19+          CCAATACCTTA-CTGGGTAAATGAAACTGCTAGTTTAGAGTTTAGACACAACAATCTCTA
                      ____________________________________________________________
consensus             CCAATACCTTA-CTGGGTAAATGAAACTGCTAGTTTAGAGTTTAGACACAACAATCTCTA
 
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rJMSF037O10+          TATATATATATAGCTGGCCTGTATCTACTAGTATATT                       
rJMSF011P24+          TATATATATATAGCTGGCCTGTATCTACTAGTATATT                       
rJMSF024I19+          TATATATATATAGCTGGCCTGTATCTACTAGTATATTTGAAGCTAAACACCAAACCAAGT
                      ____________________________________________________________
consensus             TATATATATATAGCTGGCCTGTATCTACTAGTATATTTGAAGCTAAACACCAAACCAAGT