Contig 013971:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024G23Sequence669009347 (2)ref|XP_009760426.1|6e-89PREDICTED: uncharacterized protein LOC104212768 isoform X2 [Nicotiana sylvestri780013971 (2)ref|XP_009339498.1|176PREDICTED: uncharacterized protein LOC103931703 [Pyrus x bretschneideri]
JMSF025G23Sequence609009347 (2)ref|XP_009760426.1|3e-80PREDICTED: uncharacterized protein LOC104212768 isoform X2 [Nicotiana sylvestri759013971 (2)ref|XP_009344003.1|175PREDICTED: uncharacterized protein LOC103935907 [Pyrus x bretschneideri]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+              TGATCGCACTGTTTCTGGTTATGACCCTCGCAGATGGGCGACACTGTCAAGGTGGT
rJMSF024G23+          GAGNTGATCGCACTGTTTCTGTTTATGACCCTCGCAGATGGGCGACACTGTCAAGGTGGT
                      ____________________________________________________________
consensus             GAGNTGATCGCACTGTTTCTGTTTATGACCCTCGCAGATGGGCGACACTGTCAAGGTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TGAACTGTTCAAAATATGAGATAACAAGACTTGCTTTCTCATCAGTCGATTCAGATTACA
rJMSF024G23+          TGAACTGTTCAAAATATGAGATAACAAGACTTGCTTTCTCATCAGTCGATTCAGATTACA
                      ____________________________________________________________
consensus             TGAACTGTTCAAAATATGAGATAACAAGACTTGCTTTCTCATCAGTCGATTCAGATTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TCTATGTGCAAGGAGTAGATTATGAGGTTCTCTGTGGACAGTGGAGAGATGGCAAGAAAG
rJMSF024G23+          TCTATGTGCAAGGAGTAGATTATGAGGTTCTCTGTGGACAGTGGAGAGATGGCAAGAAAG
                      ____________________________________________________________
consensus             TCTATGTGCAAGGAGTAGATTATGAGGTTCTCTGTGGACAGTGGAGAGATGGCAAGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          CGTTTTCATTTAGAGGAGATTCAAATTGGCTTGGGTTCAACAAGTGTTCTGACAGGGACC
rJMSF024G23+          CGTTTTCATTTAGAGGAGATTCAAATTGGCTTGGGTTCAACAAGTGTTCTGACAGGGACC
                      ____________________________________________________________
consensus             CGTTTTCATTTAGAGGAGATTCAAATTGGCTTGGGTTCAACAAGTGTTCTGACAGGGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TTGTGGGGGGATGGTGCGATTCAGGGAGCTTGTTTGTGGCCGATGTTTGCAGGAAGAACA
rJMSF024G23+          TTGTGGGGGGATGGTGCGATTCAGGGAGCTTGTTTGTGGCCGATGTTTGCAGGAAGAACA
                      ____________________________________________________________
consensus             TTGTGGGGGGATGGTGCGATTCAGGGAGCTTGTTTGTGGCCGATGTTTGCAGGAAGAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          AATCACTCGCGGAAAATTTAGATTCATCTAATGGAAATGCACTCTTGATCTCTTAATCGA
rJMSF024G23+          AATCACTCGCGGAAAATTTAGATTCATCTAATGGAAATGCACTCTTGATCTCTTAATCGA
                      ____________________________________________________________
consensus             AATCACTCGCGGAAAATTTAGATTCATCTAATGGAAATGCACTCTTGATCTCTTAATCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TTCTTCACTTCACATCCAAAGATATGTCAGATCTTTGCAACATTATCAAGAACAATCATC
rJMSF024G23+          TTCTTCACTTCACATCCAAAGATATGTCAGATCTTTGCAACATTATCAAGAACAATCATC
                      ____________________________________________________________
consensus             TTCTTCACTTCACATCCAAAGATATGTCAGATCTTTGCAACATTATCAAGAACAATCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          ACTCCGGTTTTTCTGTCAGCACCGCAATGCTAGGGGCAGAATTGGAAACGCAACAAAAAC
rJMSF024G23+          ACTCCGGTTTTTCTGTCAGCACCGCAATGCTAGGGGCAGAATTGGAAACGCAACAAAAAC
                      ____________________________________________________________
consensus             ACTCCGGTTTTTCTGTCAGCACCGCAATGCTAGGGGCAGAATTGGAAACGCAACAAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          CTTCTTCAGCCCTCAACTGGTGCAGCATATCAGCATGCAAGGTGAGCCACTGAGCCCCCA
rJMSF024G23+          CTTCTTCAGCCCTCAACTGGTGCAGCATATCAGCATGCAAGGTGAGCCACTGAGCCCCCA
                      ____________________________________________________________
consensus             CTTCTTCAGCCCTCAACTGGTGCAGCATATCAGCATGCAAGGTGAGCCACTGAGCCCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TAGTTTTGTATGCAGTCAGTCCCAGATTCTCATTCAACTGAAGTGAAAAGACTTTCTTGT
rJMSF024G23+          TAGTTTTGTATGCAGTCAGTCCCAGATTCTCATTCAACTGAAGTGAAAAGACTTTCTTGT
                      ____________________________________________________________
consensus             TAGTTTTGTATGCAGTCAGTCCCAGATTCTCATTCAACTGAAGTGAAAAGACTTTCTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          CCTCCTTGTGGTGCTGCTAGTGTTCCATCAGGCTAAATTATAGGAACTTTAACTAAATGC
rJMSF024G23+          CCTCCTTGTGGTGCTGCTAGTGTTCCATCAGGCTAAATTATAGGAACTTTAACTAAATGC
                      ____________________________________________________________
consensus             CCTCCTTGTGGTGCTGCTAGTGTTCCATCAGGCTAAATTATAGGAACTTTAACTAAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TGTACTAATACTTACTCTGATAGTCAGATCTCCACTTCAATCAGCAGAAATTTATGGCTT
rJMSF024G23+          TGTACTAATACTTACTCTGATAGTCAGATCTCCACTTCAATCAGCAGAAATTTATGGCTT
                      ____________________________________________________________
consensus             TGTACTAATACTTACTCTGATAGTCAGATCTCCACTTCAATCAGCAGAAATTTATGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025G23+          TTTTGAAGCAGCAGTCAAAATGGATAGTCCTTGCAACCTT                    
rJMSF024G23+          TTTTGAAGCAGCAGTCAAAATGGATAGTCCTTGCAACCTTGAAATTTTACCCTTTGTGTG
                      ____________________________________________________________
consensus             TTTTGAAGCAGCAGTCAAAATGGATAGTCCTTGCAACCTTGAAATTTTACCCTTTGTGTG