| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003K21 | Sequence | 280 | 013216 (6) | gb|EYU37602.1| | 1e-06 | hypothetical protein MIMGU_mgv1a001537mg [Erythranthe guttata] | 755 | 013966 (3) | ref|XP_009617613.1| | 7e-95 | PREDICTED: uncharacterized protein LOC104109925 isoform X4 [Nicotiana tomentosi |
| JMSF021P04 | Sequence | 670 | 013216 (6) | ref|XP_006346335.1| | 2e-68 | PREDICTED: uncharacterized protein LOC102595098 isoform X1 [Solanum tuberosum] | 741 | 013966 (3) | ref|XP_009617613.1| | 2e-87 | PREDICTED: uncharacterized protein LOC104109925 isoform X4 [Nicotiana tomentosi |
| JMSF025I01 | Sequence | 693 | 013216 (6) | ref|XP_006346335.1| | 7e-85 | PREDICTED: uncharacterized protein LOC102595098 isoform X1 [Solanum tuberosum] | 802 | 013966 (3) | ref|XP_009617613.1| | 4e-92 | PREDICTED: uncharacterized protein LOC104109925 isoform X4 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
rJMSF003K21+ TTGATCAGGATGTTA
rJMSF025I01+ CCATTTTTGCCACTCATCGTTTGATCAGGATGTTA
____________________________________________________________
consensus CCATTTTTGCCACTCATCGTTTGATCAGGATGTTA
. : . : . : . : . : . :
rJMSF003K21+ AGCTGTGGATTTGAGACAGAAACCAATCCACCCTTGCTATACTGCTTCAAGCTCTCGCGG
rJMSF025I01+ AGCTGTGGGATTGAGACAGAAACCAATCCACCC-TGCTATACTGCTTCAAGCTCTCGCGG
rJMSF021P04+ TACTGCTTCAAGCTCTCGCGG
____________________________________________________________
consensus AGCTGTGGGTTTGAGACAGAAACCAATCCACCCTTGCTATACTGCTTCAAGCTCTCGCGG
. : . : . : . : . : . :
rJMSF003K21+ GAATGTAATGGTTTGCTTTTCTCCAGATGATCACTATCTTCTAGTTTCAGCTGTTGATAA
rJMSF025I01+ GAATGTAATGGTTTGCTTTTCTCCAGATGATCACTATCTTCTAGTTTCAGCTGTTGATAA
rJMSF021P04+ GAATGTAATGGTTTGCTTTTCTCCAGATGATCACTATCTTCTAGTTTCAGCTGTTGATAA
____________________________________________________________
consensus GAATGTAATGGTTTGCTTTTCTCCAGATGATCACTATCTTCTAGTTTCAGCTGTTGATAA
. : . : . : . : . : . :
rJMSF003K21+ TGAGGTGAAACAACTATTGGCTGTTGATGGAAGGCTTCACTTGGATTTTGGTATTGCTTC
rJMSF025I01+ TGAGGTGAAACAACTATTGGCTGTTGATGGAAGGCTTCACTTGGATTTTGGTATTGCTTC
rJMSF021P04+ TGAGGTGAAACAACTATTGGCTGTTGATGGAAGGCTTCACTTGGATTTTGGTATTGCTTC
____________________________________________________________
consensus TGAGGTGAAACAACTATTGGCTGTTGATGGAAGGCTTCACTTGGATTTTGGTATTGCTTC
. : . : . : . : . : . :
rJMSF003K21+ AACTGGCAGTTCACAGAATTACACTCGATCTTATTACATGAATGGGAGAGATTATGTTAT
rJMSF025I01+ AACTGGCAGTTCACAGAATTACACTCGATCTTATTACATGAATGGGAGAGATTATGTTAT
rJMSF021P04+ AACTGGCAGTTCACAGAATTACACTCGATCTTATTACATGAATGGGAGAGATTATGTTAT
____________________________________________________________
consensus AACTGGCAGTTCACAGAATTACACTCGATCTTATTACATGAATGGGAGAGATTATGTTAT
. : . : . : . : . : . :
rJMSF003K21+ CAGTGGAAGTTGTGATGAGCATGTCATTCGTATCTGCTGTGCTCAAACGGGGAGGCGACT
rJMSF025I01+ CAGTGGAAGTTGTGATGAGCATGTCATTCGTATCTGCTGTGCTCAAACGGGGAGGCGACT
rJMSF021P04+ CAGTGGAAGTTGTGATGAGCATGTCATTCGTATCTGCTGTGCTCAAACGGGGAGGCGACT
____________________________________________________________
consensus CAGTGGAAGTTGTGATGAGCATGTCATTCGTATCTGCTGTGCTCAAACGGGGAGGCGACT
. : . : . : . : . : . :
rJMSF003K21+ TAGGGATGTATCGTTGGAGGGAAAAGGTTCAGGAGCATCTATGTTTGTTCAATCTTTGAG
rJMSF025I01+ TAGGGATGTATCGTTGGAGGGAAAAGGTTCAGGAGCATCTATGTTTGTTCAATCTTTGAG
rJMSF021P04+ TAGGGATGTATCGTTGGAGGGAAAAGGTTCAGGAGCATCTATGTTTGTTCAATCTTTGAG
____________________________________________________________
consensus TAGGGATGTATCGTTGGAGGGAAAAGGTTCAGGAGCATCTATGTTTGTTCAATCTTTGAG
. : . : . : . : . : . :
rJMSF003K21+ GGGTGACCCTTTCAGAGACTTCAACATGAGCTTCTTAGCAGCCTATACGCGTCCAAGTTC
rJMSF025I01+ GGGTGACCCTTTCAGAGACTTCAACATGAGCTTCTTAGCAGCCTATACGCGTCCAAGTTC
rJMSF021P04+ GGGTGACCCTTTCAGAGACTTCAACATGAGCTTCTTAGCAGCCTATACGCGTCCAAGTTC
____________________________________________________________
consensus GGGTGACCCTTTCAGAGACTTCAACATGAGCTTCTTAGCAGCCTATACGCGTCCAAGTTC
. : . : . : . : . : . :
rJMSF003K21+ AGTTTCAGAAATTGTTAAGGTGAATCTGTTGGCATCCAATGACCAATATAGAGTTCGTTC
rJMSF025I01+ AGTTTCAGAAATTGTTAAGGTGAATCTGTTGGCATCCAATGACCAATATAGAGTTCGTTC
rJMSF021P04+ AGTTTCAGAAATTGTTAAGGTGAATCTGTTGGCATCCAATGACCAATATAGAGTTCGTTC
____________________________________________________________
consensus AGTTTCAGAAATTGTTAAGGTGAATCTGTTGGCATCCAATGACCAATATAGAGTTCGTTC
. : . : . : . : . : . :
rJMSF003K21+ ACACCATAACCATCCCCATCCATCATTTGGTAGTGGAGGTTAACATAGTTGCTGCAATTC
rJMSF025I01+ ACACCATAACCATCCCCATCCATCATTTGGTAGTGGAGGTTAACATAGTTGCTGCAATTC
rJMSF021P04+ ACACCATAACCATCCCCATCCATCATTTGGTAGTGGAGGTTAACATAGTTGCTGCAATTC
____________________________________________________________
consensus ACACCATAACCATCCCCATCCATCATTTGGTAGTGGAGGTTAACATAGTTGCTGCAATTC
. : . : . : . : . : . :
rJMSF003K21+ CCATGTACAAACTATATATATCCATATTCCTCATTTGCGCCAAATTATGTCAGAAATGAT
rJMSF025I01+ CCATGTACAAACTATATATATCCATATTCCTCATTTGCGCCAAATTATGTCAGAAATGAT
rJMSF021P04+ CCATGTACAAACTATATATATCCATATTCCTCATTTGCGCCAAATTATGTCAGAAATGAT
____________________________________________________________
consensus CCATGTACAAACTATATATATCCATATTCCTCATTTGCGCCAAATTATGTCAGAAATGAT
. : . : . : . : . : . :
rJMSF003K21+ GTGGCTTGTCATAAATGTTTATCGTATTTATCAACTATTCGATAAAGCTGTGTCGTTTTG
rJMSF025I01+ GTGGCTTGTCATAAATGTTTATCGTATTTATCAACTATTCGATAAAGCTGTGTCGTTTTG
rJMSF021P04+ GTGGCTTGTCATAAATGTTTATCGTATTTATCAACTATTCGATAAAGCTGTGTCGTTTTG
____________________________________________________________
consensus GTGGCTTGTCATAAATGTTTATCGTATTTATCAACTATTCGATAAAGCTGTGTCGTTTTG
. : . : . : . : . : . :
rJMSF003K21+ GACAAAGTTTGGTGCAAAATAGAGGAAATATATATAGTATTATTGCTTGCTTAGTTGCGC
rJMSF025I01+ GACAAAGTTTGGTGCAAAATAGAGGAAATATATATAGTATTATTGCTTGCTTAGTTGCGC
rJMSF021P04+ GACAAAGTTTGGTGCAAAATAGAGGAAATATATATAGTATTATTGCTTGCTTAGTTGCGC
____________________________________________________________
consensus GACAAAGTTTGGTGCAAAATAGAGGAAATATATATAGTATTATTGCTTGCTTAGTTGCGC
. : . : . : . : . : . :
rJMSF003K21+ TTGTAAATATAGTA
rJMSF025I01+ TTGTAAATATAGTAGTATATCATAATAAGAAAATAATGATGTAT
rJMSF021P04+ TTGTAAATATAGTAGTATATCATAATAAGAAAATAATGATGTATTGATATTGTCTACCAA
____________________________________________________________
consensus TTGTAAATATAGTAGTATATCATAATAAGAAAATAATGATGTATTGATATTGTCTACCAA