Contig 013963:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003D22Sequence362010555 (7)656013963 (3)ref|XP_009594997.1|160PREDICTED: uncharacterized protein LOC104091376 [Nicotiana tomentosiformis]
JMSF019H16Sequence501010555 (7)ref|XP_006349202.1|66.2PREDICTED: uncharacterized protein LOC102604741 [Solanum tuberosum]768013963 (3)ref|XP_009594997.1|234PREDICTED: uncharacterized protein LOC104091376 [Nicotiana tomentosiformis]
JMSF021J06Sequence660010555 (7)emb|CDP17086.1|2e-15unnamed protein product [Coffea canephora]768013963 (3)ref|XP_009594997.1|159PREDICTED: uncharacterized protein LOC104091376 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF019H16+                                                      AACCAGATGACAAGTT
                      ____________________________________________________________
consensus                                                         AACCAGATGACAAGTT
 
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rJMSF019H16+          TTTTCCAAGCCATCACCTGCTTCCTACGGGTTCAGGTCTGTATCTACTAAGCTGTACAGC
                      ____________________________________________________________
consensus             TTTTCCAAGCCATCACCTGCTTCCTACGGGTTCAGGTCTGTATCTACTAAGCTGTACAGC
 
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rJMSF019H16+          GGGTGATGCCAGCAAGGCAGAGAAGCAAATCCGAGCTGCTCAGTCGGTGTTCTTAAACTC
                      ____________________________________________________________
consensus             GGGTGATGCCAGCAAGGCAGAGAAGCAAATCCGAGCTGCTCAGTCGGTGTTCTTAAACTC
 
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rJMSF019H16+          CCCACACCCACTCGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
rJMSF003D22+                      CGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
rJMSF021J06+                      CGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
                      ____________________________________________________________
consensus             CCCACACCCACTCGAGATATTGAGTGACCGTGCTGCATATGGGTCTGGAGGAACGGTTCA
 
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rJMSF019H16+          AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
rJMSF003D22+          AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
rJMSF021J06+          AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
                      ____________________________________________________________
consensus             AAGAGACCATGACATGAGCTCATACATGAAATCCATCCGCAATGTTATCCAGAAAGAACT
 
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rJMSF019H16+          GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
rJMSF003D22+          GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
rJMSF021J06+          GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
                      ____________________________________________________________
consensus             GAACCGCATTAGGAAAGCCAAGAGAGCACAGCGGCGAAGAGTATGGTGGCCGCTTGTGGC
 
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rJMSF019H16+          AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
rJMSF003D22+          AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
rJMSF021J06+          AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
                      ____________________________________________________________
consensus             AGTAGACGGGATCAATGGTGGTATTATTTTCCGGAGGCCTGTTGTGTCTGGTAACATGCG
 
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rJMSF019H16+          TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
rJMSF003D22+          TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
rJMSF021J06+          TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
                      ____________________________________________________________
consensus             TAACGGGCAGTTCAACTTTGGTGGAATGATTCGAACTGGAAAAGAGTCATTGAAACGGTT
 
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rJMSF019H16+          CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
rJMSF003D22+          CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
rJMSF021J06+          CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
                      ____________________________________________________________
consensus             CAGCACGCTAGTTGCATCCCAGCACATGCATTTGCTTGTGGTGCTTATGCTCCCAGCACG
 
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rJMSF019H16+          CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGATTGATTGATTGATT
rJMSF003D22+          CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGGTTGATTGATTGATT
rJMSF021J06+          CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGATTGATTGATTGATT
                      ____________________________________________________________
consensus             CTTGTTGGTATTAGGGACATTCTCCGCCACTAATACACTACATTGATTGATTGATTGATT
 
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rJMSF019H16+          GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
rJMSF003D22+          GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
rJMSF021J06+          GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
                      ____________________________________________________________
consensus             GTTGAATGGAATGGAATGGAAGATGAATTAGAGGGAGGATTCGTTATTCATTTAGTTGCT
 
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rJMSF019H16+          GAAGCAACAAATGTTCCCTGGTTTTCAGAAGGGGAATATAATGGTTGATTATACATGATG
rJMSF003D22+          GAAGCAACAAATGTTCCCTGGTTTCCAGAAGGGGAATATAATGGTTGATTATACATGATG
rJMSF021J06+          GAAGCAACAAATGTTCCCTGGTTTTCAGAAGGGGAATATAATGGTTGATTATACATGATG
                      ____________________________________________________________
consensus             GAAGCAACAAATGTTCCCTGGTTTTCAGAAGGGGAATATAATGGTTGATTATACATGATG
 
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rJMSF019H16+          ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
rJMSF003D22+          ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
rJMSF021J06+          ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
                      ____________________________________________________________
consensus             ATGATTCTTGTCATATGTAAACTAGAATTAGCCTTTGTTCAATTTCATGGAAATCCGACA
 
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rJMSF019H16+          ACTATGTATATTAACTGTTACGTTGGATG                               
rJMSF003D22+          ACTATGTATATTAACTGTTACGTTGGATGGAACCCAGAAGTGTTCCAACCGCATATAAAA
rJMSF021J06+          ACTATGTATATTAACTGTTACGTTGGATGGAACCCAGAAGTGTTCCAACCGCATATAAAA
                      ____________________________________________________________
consensus             ACTATGTATATTAACTGTTACGTTGGATGGAACCCAGAAGTGTTCCAACCGCATATAAAA
 
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rJMSF003D22+          T                                                           
rJMSF021J06+          TTACCATTACTCTATTTGTTTGGTTCTGTTGGATAGTATGTAATGCTTTTTCCACATTTA
                      ____________________________________________________________
consensus             TTACCATTACTCTATTTGTTTGGTTCTGTTGGATAGTATGTAATGCTTTTTCCACATTTA
 
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rJMSF021J06+          GGTTGGTTCCAACTTCCAACTGCCAAATCATCCCTCCTGTGCATGTGGAGATGTAGTATA
                      ____________________________________________________________
consensus             GGTTGGTTCCAACTTCCAACTGCCAAATCATCCCTCCTGTGCATGTGGAGATGTAGTATA