Contig 013962:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN043F09Sequence340013962 (4)emb|CDP07109.1|3e-16unnamed protein product [Coffea canephora]
JMSF002P08Sequence222006500 (10)725013962 (4)emb|CDP07109.1|2e-88unnamed protein product [Coffea canephora]
JMSF017A01Sequence457006500 (10)553013962 (4)emb|CDP07109.1|5e-59unnamed protein product [Coffea canephora]
JMSF021F14Sequence654006500 (10)778013962 (4)emb|CDP07109.1|1e-98unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF002P08+                                                              AAAGGTGT
rJMSF021F14+          AAAGAGTTGCAATGGCAATATCTCCGACAGGATTTGGTCCTACTCTTGGACCAAAGGTGT
                      ____________________________________________________________
consensus             AAAGAGTTGCAATGGCAATATCTCCGACAGGATTTGGTCCTACTCTTGGACCAAAGGTGT
 
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rJMSF002P08+          CACCTGGCTCCCCAGAAGCTCTAACACTGGCTCAGTGGATCAACCAGAGCTATAGTTATC
rJMSF021F14+          CACCTGGCTCCCCAGAAGCTCTAACACTGGCTCAGTGGATCAACCAGAGCTATAGTTATC
                      ____________________________________________________________
consensus             CACCTGGCTCCCCAGAAGCTCTAACACTGGCTCAGTGGATCAACCAGAGCTATAGTTATC
 
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rJMSF017A01+                                                  TGAATCAGNGTTGAAAAATC
rJMSF002P08+          ACATGGGAGCACAATTGCTAGGAACTGATTCTGTGGGCGCTGAATCAGTGTTGAAAAATC
rJMSF021F14+          ACATGGGAGCACAATTGCTAGGAACTGATTCTGTGGGCGCTGAATCAGTGTTGAAAAATC
                      ____________________________________________________________
consensus             ACATGGGAGCACAATTGCTAGGAACTGATTCTGTGGGCGCTGAATCAGTGTTGAAAAATC
 
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rJMSF017A01+          TCTGGCATCACCANGATGCCATNTTGTGNTNCTCCATAAAGTCGCTGCCGGTTNTCATCT
rJMSF002P08+          TCTGGCATCACCATGATGCCATCTTGTGCTGCTCCATAAAGTCGCTGCCGGTTTTCATCT
rJMSF021F14+          TCTGGCATCACCATGATGCCATCTTGTGCTGCTCCATAAAGTCGCTGCCGGTTTTCATCT
                      ____________________________________________________________
consensus             TCTGGCATCACCATGATGCCATCTTGTGCTGCTCCATAAAGTCGCTGCCGGTTTTCATCT
 
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JMFN043F09-                                         AAACAACTTTACTCGCTCTACAGGATATCC
rJMSF017A01+          TTGCAAACAAGGNTGGGCTGGACATGCTCGAAACAACTTTACTCGCTCTACAGGATATCN
rJMSF002P08+          TTGCAAACAAGGCTGGGCTGGACATGCTCGAAACAACTTTACTCGCTCTACAGGATATCA
rJMSF021F14+          TTGCAAACAAGGCTGGGCTGGACATGCTCGAAACAACTTTACTCGCTCTACAGGATATCA
                      ____________________________________________________________
consensus             TTGCAAACAAGGCTGGGCTGGACATGCTCGAAACAACTTTACTCGCTCTACAGGATATCA
 
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JMFN043F09-           CCTTGCGATAAAATCTTTGACCAATCACGGCGCAAGGTACTATTTGCTCAACTCCCAAAG
rJMSF017A01+          CATTG-GATAAAATCTTTGACGAATCAGGGCGCAAGGCACTATTTGCTGAACTCGCAAAG
rJMSF002P08+          CATTG-GATAAAATCTTTGACGAATCAGGGCGCAAGGCACTATTTGCTGAACTCGCAAAG
rJMSF021F14+          CATTG-GATAAAATCTTTGACGAATCAGGGCGCAAGGCACTATTTGCTGAACTCGCAAAG
                      ____________________________________________________________
consensus             CATTG-GATAAAATCTTTGACGAATCAGGGCGCAAGGCACTATTTGCTGAACTCGCAAAG
 
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JMFN043F09-           ATCATGCAACCCGGATTTGCTTACTTGCCTGAAGGACTCTGCATCTCCACCCATGGGACG
rJMSF017A01+          ATCATGCAACAGGGTTTTGCTTACTTGCCTGGCGGACTCTGCATGT-CAGCCATGGGACG
rJMSF002P08+          ATCATGCAACAGGGTTTTGCTTACTTGCCTGGCGGACTCTGCATGT-CAGCCATGGGACG
rJMSF021F14+          ATCATGCAACAGGGTTTTGCTTACTTGCCTGGCGGACTCTGCATGT-CAGCCATGGGACG
                      ____________________________________________________________
consensus             ATCATGCAACAGGGTTTTGCTTACTTGCCTGGCGGACTCTGCATGT-CAGCCATGGGACG
 
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JMFN043F09-           CCACATTTCCTATGAACAAGCCATAGCATGGAAAGCCCTCGCCCACAACGAAAGCACTGT
rJMSF017A01+          CCACATTTCATATGAACAAGCCATAGCATGGAAAGTCCTTGCAGACGACGAAAGCACTGT
rJMSF002P08+          CCACATTTCATATGAACAAGCCATAGCATGGAAAGTCCTTGCAGACGACGAAAGCACTGT
rJMSF021F14+          CCACATTTCATATGAACAAGCCATAGCATGGAAAGTCCTTGCAGACGACGAAAGCACTGT
                      ____________________________________________________________
consensus             CCACATTTCATATGAACAAGCCATAGCATGGAAAGTCCTTGCAGACGACGAAAGCACTGT
 
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JMFN043F09-           CACCTGCCTGGC                                                
rJMSF017A01+          CCACTGCCTGGCTTTCTCTTTTATAAACTAGTCGTTCGTTTAAATTNTTCNGTCGTNGTC
rJMSF002P08+          CCACTGCCTGGCTTTCTCTTTTATAAACTGGTCGTTCGTTTAAATTCTTCTGTCGTTGTC
rJMSF021F14+          CCACTGCCTGGCTTTCTCTTTTATAAACTGGTCGTTCGTTTAAATTCTTCTGTCGTTGTC
                      ____________________________________________________________
consensus             CCACTGCCTGGCTTTCTCTTTTATAAACTGGTCGTTCGTTTAAATTCTTCTGTCGTTGTC
 
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rJMSF017A01+          AATGCGNTCATATGCCTCCCCTTTTTCCTCAATGATCAATTGGAAGCCGTAAAAGCGCTG
rJMSF002P08+          AATGCGCTCATATGCCTCCCCTTTTTCCTCAATGATCAATTGGAAGCCGTAAAAGCGCTG
rJMSF021F14+          AATGCGCTCATATGCCTCCCCTTTTTCCTCAATGATCAATTGGAAGCCGTAAAAGCGCTG
                      ____________________________________________________________
consensus             AATGCGCTCATATGCCTCCCCTTTTTCCTCAATGATCAATTGGAAGCCGTAAAAGCGCTG
 
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rJMSF017A01+          AAGATGTTGATGAACAACCAAGGAGGGAAAAGNTTTGTTNCATTCCAAACCCAGTGAGGT
rJMSF002P08+          AAGATGTTGATGAACAACCAAGGAGGGAAAAGTTTTGTTGCATTCCAAACCCAGTGAGGT
rJMSF021F14+          AAGATGTTGATGAACAACCAAGGAGGGAAAAGTTTTGTTGCATTCCAAACCCAGTGAGGT
                      ____________________________________________________________
consensus             AAGATGTTGATGAACAACCAAGGAGGGAAAAGTTTTGTTGCATTCCAAACCCAGTGAGGT
 
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rJMSF017A01+          CCTGCATTAGTGAGTGGTTTAATTTGTTAGATNGGGTGTGTGNTGCTGAGTTT       
rJMSF002P08+          CCTGCATTAGTGAGTGGTTTAATTTGTTAGATTGGGTGTGTGGTGCTGAGTTTTTGTTTC
rJMSF021F14+          CCTGCATTAGTGAGTGGTTTAATTTGTTAGATTGGGTGTGTGGTGCTGAGTTTTTGTTTC
                      ____________________________________________________________
consensus             CCTGCATTAGTGAGTGGTTTAATTTGTTAGATTGGGTGTGTGGTGCTGAGTTTTTGTTTC
 
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rJMSF002P08+          TCCATTGTAAAGTCTGCTAGCATAGATCTCTTTATTTATTCAAATCGCATTCTTT     
rJMSF021F14+          TCCATTGTAAAGTCTGCTAGCATAGATCTCTTTATTTATTCAAATCGCATTCTTTAATCT
                      ____________________________________________________________
consensus             TCCATTGTAAAGTCTGCTAGCATAGATCTCTTTATTTATTCAAATCGCATTCTTTAATCT