Contig 013961:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021B13+                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF021B13+          GTTTACTGGGCGATGCTTTCAACATGCGCCATCCTTAACGGGTGGAGGAATGACTGTAGC
                      ____________________________________________________________
consensus             GTTTACTGGGCGATGCTTTCAACATGCGCCATCCTTAACGGGTGGAGGAATGACTGTAGC
 
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rJMSF029B21+                                                   TGCAGAACCTGAATGATGC
rJMSF021B13+          GCTCTCGGACATTGTAGTGCTAAGGGACCTTCTTAGGCCGTTGCAGAACCTGAATGATGC
                      ____________________________________________________________
consensus             GCTCTCGGACATTGTAGTGCTAAGGGACCTTCTTAGGCCGTTGCAGAACCTGAATGATGC
 
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rJMSF029B21+          CGATGCATNGTGCAGATACC-TGAGTCGTTTTATACCTTGCGTAAGCCAGTGGCATCTAC
rJMSF021B13+          CGATGCATTGTGCAGATACCTTGAGTCGTTTTATACCTTGCGTAAGCCAGTGGCATCTAC
                      ____________________________________________________________
consensus             CGATGCATTGTGCAGATACCTTGAGTCGTTTTATACCTTGCGTAAGCCAGTGGCATCTAC
 
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rJMSF029B21+          AATCAATACTTTGGCTGGAGCCCTGTACAAAGTGTTCTGTGCTTCTCCTGACCAAGCGAG
rJMSF021B13+          AATCAATACTTTGGCTGGAGCCCTGTACAAAGTGTTCTGTGCTTCTCCTGACCAAGCGAG
                      ____________________________________________________________
consensus             AATCAATACTTTGGCTGGAGCCCTGTACAAAGTGTTCTGTGCTTCTCCTGACCAAGCGAG
 
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rJMSF029B21+          GAAGGAAATGCGGCAAGCATGTTTCGACTATTTGAGCCTCGGAGGTACTTGCTCAACGGG
rJMSF021B13+          GAAGGAAATGCGGCAAGCATGTTTCGACTATTTGAGCCTCGGAGGTACTTGCTCAACGGG
                      ____________________________________________________________
consensus             GAAGGAAATGCGGCAAGCATGTTTCGACTATTTGAGCCTCGGAGGTACTTGCTCAACGGG
 
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rJMSF029B21+          ACCTGTGGCTCTGCTATCTGGGCTTAACCCGCGCCCATTGAGCTTAGTCATGCACTTCTT
rJMSF021B13+          ACCTGTGGCTCTGCTATCTGGGCTTAACCCGCGCCCATTGAGCTTAGTCATGCACTTCTT
                      ____________________________________________________________
consensus             ACCTGTGGCTCTGCTATCTGGGCTTAACCCGCGCCCATTGAGCTTAGTCATGCACTTCTT
 
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rJMSF029B21+          CGCGGTGGCCATATATGGAGTTGGTCGTCTGCTAATACCGTTTCCTTCTCCCAAGCGATT
rJMSF021B13+          CGCGGTGGCCATATATGGAGTTGGTCGTCTGCTAATACCGTTTCCTTCTCCCAAGCGATT
                      ____________________________________________________________
consensus             CGCGGTGGCCATATATGGAGTTGGTCGTCTGCTAATACCGTTTCCTTCTCCCAAGCGATT
 
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rJMSF029B21+          ATGGATTGGAGCTAGATTAATCTCGGCTGCATCTGGGATCATATTTCCCATCATAAAGGC
rJMSF021B13+          ATGGATTGGAGCTAGATTAATCTCGGCTGCATCTGGGATCATATTTCCCATCATAAAGGC
                      ____________________________________________________________
consensus             ATGGATTGGAGCTAGATTAATCTCGGCTGCATCTGGGATCATATTTCCCATCATAAAGGC
 
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rJMSF029B21+          AGAAGGGGTGAGGCAAATGTTCTTTCCTGCAACAGTACCAGCTTATTTTAGAGCTCCTCG
rJMSF021B13+          AGAAGGGGTGAGGCAAATGTTCTTTCCTGCAACAGTACCAGCTTATTTTAGAGCTCCTCG
                      ____________________________________________________________
consensus             AGAAGGGGTGAGGCAAATGTTCTTTCCTGCAACAGTACCAGCTTATTTTAGAGCTCCTCG
 
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rJMSF029B21+          TGTTTAACTAAATCCTCATTTAGCTATGGCTGATCAAGAATCTTGAACTGGAAAAACCAA
rJMSF021B13+          TGTTTAACTAAATCCTCATTTAGCTATGGCTGATCAAGAATCTTGAACTGGAAAAACCAA
                      ____________________________________________________________
consensus             TGTTTAACTAAATCCTCATTTAGCTATGGCTGATCAAGAATCTTGAACTGGAAAAACCAA
 
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rJMSF029B21+          ACCATCTGGGATCATCATAATCCATTCTTTCTGTTCGGTCTTCCCTTGCTCAAAACAAGA
rJMSF021B13+          ACCATCTGGGATCATCATAATCCATTCTTTCTGTTCGGTCTTCCCTTGCTCAAAACAAGA
                      ____________________________________________________________
consensus             ACCATCTGGGATCATCATAATCCATTCTTTCTGTTCGGTCTTCCCTTGCTCAAAACAAGA
 
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rJMSF029B21+          TATGTGTACATGTTCAACCATTTCGGAGGAGTTAACTAGCGAGGTAGGGAATGTAAAATT
rJMSF021B13+          TATGTGTACATGTTCAACCATTTCGGAGGAGTTAACTAGCGAGGTAGGGAATGTAAAATT
                      ____________________________________________________________
consensus             TATGTGTACATGTTCAACCATTTCGGAGGAGTTAACTAGCGAGGTAGGGAATGTAAAATT
 
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rJMSF029B21+          CATTGTGCATGATTAACAAACTNCAAAC                                
rJMSF021B13+          CATTGTGCATGATTAACAAACTTCAAACTGTAGAAAAGAGACCATCAAGCTTAACCATGT
                      ____________________________________________________________
consensus             CATTGTGCATGATTAACAAACTTCAAACTGTAGAAAAGAGACCATCAAGCTTAACCATGT