Contig 013956:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007K21Sequence284006398 (6)ref|XP_009359305.1|6e-14PREDICTED: vinorine synthase [Pyrus x bretschneideri]783013956 (2)ref|XP_002308780.1|2e-29hypothetical protein POPTR_0006s01190g [Populus trichocarpa] gb|EEE92303.1| hypo
JMSF020G18Sequence660006398 (6)ref|XP_009610450.1|4e-46PREDICTED: vinorine synthase-like [Nicotiana tomentosiformis]771013956 (2)ref|XP_011008627.1|1e-25PREDICTED: vinorine synthase-like [Populus euphratica]

Alignment

This contig is upended


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rJMSF007K21+                                 CCCNAACCTCAAGACGCATTTGCTGACCAATGCGGTG
                      ____________________________________________________________
consensus                                    CCCNAACCTCAAGACGCATTTGCTGACCAATGCGGTG
 
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rJMSF007K21+          AACCTGCGAAAGAAGNTGAACCCGCCATTCCCTTCGCAATGCCTAGGCAACATCAACCAA
rJMSF020G18+             CTGCGAAAGAAGTTGAACCCGCCACTCCATTCGGAGTGCCTAGGCAACATCTTCCAT
                      ____________________________________________________________
consensus             AACCTGCGAAAGAAGTTGAACCCGCCATTCCCTTCGGAGTGCCTAGGCAACATCTTCCAT
 
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rJMSF007K21+          GTGGTGGGCGCTCGGTGGGAATCGGAAGTCGACGGTGGTGGAAGAGTTACTGCCGGGTTT
rJMSF020G18+          ACAGTGGCCGCTCGGTGGGACTCGGAAGCCGACGGGGGTGGAAGCGTTAATGCCGGGTTT
                      ____________________________________________________________
consensus             GTGGTGGGCGCTCGGTGGGACTCGGAAGTCGACGGTGGTGGAAGCGTTACTGCCGGGTTT
 
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rJMSF007K21+          CTTGTAGGAAGAGTCGCGGAAGCCATCCACAAGGTTACCGACGACTACTTGAGGGAAATG
rJMSF020G18+          CTTGTAGGAAGAGTCGCGGAAGCCATCAACAAGGTTACCAACGACTACGTGAGGGCAATG
                      ____________________________________________________________
consensus             CTTGTAGGAAGAGTCGCGGAAGCCATCCACAAGGTTACCGACGACTACTTGAGGGCAATG
 
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rJMSF007K21+          CACGCGGAGGGTAGGTATCTCAAAGCCATATTAGGCGTATCGTCAAAGTCATCACTTCAT
rJMSF020G18+          CACGAGGAGGATGGGTTTCTCAAAGCCATATTAAACGTAT---CAAAGCCAT---TTCGT
                      ____________________________________________________________
consensus             CACGCGGAGGGTGGGTTTCTCAAAGCCATATTAGGCGTATCGTCAAAGTCATCACTTCGT
 
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rJMSF007K21+          AATGCCGATGAGATTAAAGTTTTAGGTATAAGTAGTTTGTGTAATAGTCAGTTTTCTCAA
rJMSF020G18+          AATGCGGATGAGTTTAAGAGTTTAAGTGTAAGTAGTTTGTGTAATAGTCAGTTTTCTCAA
                      ____________________________________________________________
consensus             AATGCGGATGAGTTTAAGGTTTTAGGTGTAAGTAGTTTGTGTAATAGTCAGTTTTCTCAA
 
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rJMSF007K21+          GTTGATTTTGGGTGGGGCAAGCCGATATGGATTGGCCTGGGTCATACACTGGACGACTTG
rJMSF020G18+          GTTGATTTTGGGTGGGGCAAGCCGATATGGATTGGCCTGGGTCATACACTGGAGGACTTG
                      ____________________________________________________________
consensus             GTTGATTTTGGGTGGGGCAAGCCGATATGGATTGGCCTGGGTCATACACTGGAGGACTTG
 
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rJMSF007K21+          GCTGTTTTCATGGATGCAGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGAAAAAGAA
rJMSF020G18+          GCTGTTTTCATGGATGTAGAAAATGGGGGAATAGAAGTGTGGATTGGATTGGCAAAAGAG
                      ____________________________________________________________
consensus             GCTGTTTTCATGGATGTAGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGCAAAAGAG
 
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rJMSF007K21+          GTTATGTGCAATTTAGATAAGGACATGAAATTTCATGCTTATGTTTCTTTCTCTAAAATC
rJMSF020G18+          GTTATGTGCAATTTAGACAAAGACATGAAATTTCATGCTTATGTGTCTTTCTCTCAAATC
                      ____________________________________________________________
consensus             GTTATGTGCAATTTAGATAAGGACATGAAATTTCATGCTTATGTTTCTTTCTCTCAAATC
 
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rJMSF007K21+          GTTTCCGAACCGTCTTGTCCTATGCGGTCTGCACTCTAGTTGGAGGATGGAGAAAG    
rJMSF020G18+          GTTTCCGAACCGTCTTGTTCTCTGCAGTCTGCACTTTAGTTGAAGGATGGAGAAAGCTAA
                      ____________________________________________________________
consensus             GTTTCCGAACCGTCTTGTTCTCTGCGGTCTGCACTTTAGTTGGAGGATGGAGAAAGCTAA
 
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rJMSF020G18+          GCTAGGCAAGTCATGCAAATGCCACATATTGGGTTGGTTCTGTGGTTCATCATATTTAGA
                      ____________________________________________________________
consensus             GCTAGGCAAGTCATGCAAATGCCACATATTGGGTTGGTTCTGTGGTTCATCATATTTAGA
 
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rJMSF020G18+          GTATTATTTCTTCTCATCAAATAATGTATTTATTTAATTTGCTAGTTTACTTGTTATTTT
                      ____________________________________________________________
consensus             GTATTATTTCTTCTCATCAAATAATGTATTTATTTAATTTGCTAGTTTACTTGTTATTTT
 
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rJMSF020G18+          CCTGCACCAATAATAAAGGTATATTACCAAGGACCTTGTGGTCCATCGGTATTAAGTTGC
                      ____________________________________________________________
consensus             CCTGCACCAATAATAAAGGTATATTACCAAGGACCTTGTGGTCCATCGGTATTAAGTTGC
 
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rJMSF020G18+          TCCTTTATGTGGGACGTGTTGGGTTCGAGCCTTGGTAAATGAGTAGCATATATATGTGGG
                      ____________________________________________________________
consensus             TCCTTTATGTGGGACGTGTTGGGTTCGAGCCTTGGTAAATGAGTAGCATATATATGTGGG