Contig 013951:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013C05Sequence375000667 (2)ref|XP_009762727.1|1e-31PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]771013951 (2)ref|XP_009762727.1|1e-112PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]
JMSF019K08Sequence540000667 (2)ref|XP_009762727.1|5e-86PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]756013951 (2)ref|XP_009762727.1|5e-78PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF013C05+                                                                 AGTTC
                      ____________________________________________________________
consensus                                                                    AGTTC
 
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rJMSF013C05+          CGCCACTATTTGGATGGCGTAGAAGAAAGCTGACTCATTCAACATGAATGCACATAAATG
                      ____________________________________________________________
consensus             CGCCACTATTTGGATGGCGTAGAAGAAAGCTGACTCATTCAACATGAATGCACATAAATG
 
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rJMSF013C05+          GTTTCTTACAAACTTCGACTGTTCTGCACTTTGGGTAAAGGACCGGAGTGCTCTCATTCA
                      ____________________________________________________________
consensus             GTTTCTTACAAACTTCGACTGTTCTGCACTTTGGGTAAAGGACCGGAGTGCTCTCATTCA
 
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rJMSF013C05+          GGCGCTGTCAACTAATCCTGAATTTCTCAGAAACAAAGCTTCTCAAGCAAATATGGTTGT
rJMSF019K08+                                               GCTTCTCAAGCAAATATGGTTGT
                      ____________________________________________________________
consensus             GGCGCTGTCAACTAATCCTGAATTTCTCAGAAACAAAGCTTCTCAAGCAAATATGGTTGT
 
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rJMSF013C05+          AGATTACAAAGATTGGCAAATTCCCCTTGGACGCAGGTTCAGATCACTGAAACTATGGAT
rJMSF019K08+          AGATTACAAAGATTGGCAAATTCCCCTTGGACGCAGGTTCAGATCACTGAAACTATGGAT
                      ____________________________________________________________
consensus             AGATTACAAAGATTGGCAAATTCCCCTTGGACGCAGGTTCAGATCACTGAAACTATGGAT
 
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rJMSF013C05+          GGTATTAAGACTCTATGGCTTGGAGAACCTTCAAGCGTATGTGAAGAACCATATAGAATT
rJMSF019K08+          GGTATTAAGACTCTATGGCTTGGAGAACCTTCAAGCGTATGTGAAGAACCATATAGAATT
                      ____________________________________________________________
consensus             GGTATTAAGACTCTATGGCTTGGAGAACCTTCAAGCGTATGTGAAGAACCATATAGAATT
 
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rJMSF013C05+          GGCTAAACGCTTCGAAGAGTTTGTTTCCGAGGACTCGAGGTTTGAGGTTGTGGCGCATCG
rJMSF019K08+          GGCTAAACGCTTCGAAGAGTTTGTTTCCGAGGACTCGAGGTTTGAGGTTGTGGCGCATCG
                      ____________________________________________________________
consensus             GGCTAAACGCTTCGAAGAGTTTGTTTCCGAGGACTCGAGGTTTGAGGTTGTGGCGCATCG
 
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rJMSF013C05+          AAAGTTTTCTCTAGTGTGCTTCCGTCTTCGGCCACCTCAGAACGACGAAGATCTTGCAAA
rJMSF019K08+          AAAGTTTTCTCTAGTGTGCTTCCGTCTTCGGCCACCTCAGAACGACGAAGATCTTGCAAA
                      ____________________________________________________________
consensus             AAAGTTTTCTCTAGTGTGCTTCCGTCTTCGGCCACCTCAGAACGACGAAGATCTTGCAAA
 
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rJMSF013C05+          CAAACTCAACCGCAATCTGCTGGACGCTGTCAACTCATCTGGAAAAATATTTATCTCACA
rJMSF019K08+          CAAACTCAACCGCAATCTGCTGGACGCTGTCAACTCATCTGGAAAAATATTTATCTCACA
                      ____________________________________________________________
consensus             CAAACTCAACCGCAATCTGCTGGACGCTGTCAACTCATCTGGAAAAATATTTATCTCACA
 
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rJMSF013C05+          CACCGTTCTATCCGGCAAATACGTTCTGCGCCTTGCGGTCGGGGCTCCGCTGACGGAAGA
rJMSF019K08+          CACCGTTCTATCCGGCAAATACGTTCTGCGCCTTGCGGTCGGGGCTCCGCTGACGGAAGA
                      ____________________________________________________________
consensus             CACCGTTCTATCCGGCAAATACGTTCTGCGCCTTGCGGTCGGGGCTCCGCTGACGGAAGA
 
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rJMSF013C05+          GAGGCATGTGATTGCAGCCTGGAAAGTTTTGCAAGATGAGGGTGCTGCTGCTTTGTTGAG
rJMSF019K08+          GAGGCATGTGATTGCAGCCTGGAAAGTTTTGCAAGATGAGGGTGCTGCTGCTTTGTTGAG
                      ____________________________________________________________
consensus             GAGGCATGTGATTGCAGCCTGGAAAGTTTTGCAAGATGAGGGTGCTGCTGCTTTGTTGAG
 
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rJMSF013C05+          AAACTCTTCAAAGATGACCAATTCTTTTGCATAGAGGATTGATTCTCTGCTCCAACCAGT
rJMSF019K08+          AAACTCTTCAAAGATGACCAATTCTTTTGCATAGAGGATTGATTCTCTGCTCCAACCAGT
                      ____________________________________________________________
consensus             AAACTCTTCAAAGATGACCAATTCTTTTGCATAGAGGATTGATTCTCTGCTCCAACCAGT
 
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rJMSF013C05+          TTATCCATTCAGATTGTCTGCAAATTTTACTCTTCATTCACAGATTTGCTGTTGAAGTAC
rJMSF019K08+          TTATCCATTCAGATTGTCTGCAAATTTTACTCTTCATTCACAGATTTGCTGTTGAAGTAC
                      ____________________________________________________________
consensus             TTATCCATTCAGATTGTCTGCAAATTTTACTCTTCATTCACAGATTTGCTGTTGAAGTAC
 
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rJMSF013C05+          TGAAATTCTTGTGTAATTCTTTGGCAATGGATGAATACTATTGCAC              
rJMSF019K08+          TGAAATTCTTGTGTAATTCTTTGGCAATGGATGAATACTATTGCACATTGTATTAAGATG
                      ____________________________________________________________
consensus             TGAAATTCTTGTGTAATTCTTTGGCAATGGATGAATACTATTGCACATTGTATTAAGATG