Contig 013950:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019B02Sequence531003915 (2)ref|XP_009601466.1|137PREDICTED: uncharacterized protein LOC104096758 [Nicotiana tomentosiformis]754013950 (2)ref|XP_009601466.1|276PREDICTED: uncharacterized protein LOC104096758 [Nicotiana tomentosiformis]
JMSF051M08Sequence657003915 (2)ref|XP_009765760.1|5e-46PREDICTED: uncharacterized protein LOC104217264 isoform X1 [Nicotiana sylvestri736013950 (2)ref|XP_009601466.1|266PREDICTED: uncharacterized protein LOC104096758 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF051M08+                                                    CCAGGTCCAGAAGCTAAA
rJMSF019B02+                                    CCCGTGCTTTACTTATCCAGGTCCAGAAGCTAAA
                      ____________________________________________________________
consensus                                       CCCGTGCTTTACTTATCCAGGTCCAGAAGCTAAA
 
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rJMSF051M08+          ACTCGACATTGAGGAGGCAATGCTTGAGCTGGATCAAATTTTTCGAGCAAATGAAATTAA
rJMSF019B02+          ACTCGACATTGAGGAGGCAATGCTTGAGCTGGATCAAATTCTTCGAGCAAATGAAATTAA
                      ____________________________________________________________
consensus             ACTCGACATTGAGGAGGCAATGCTTGAGCTGGATCAAATTTTTCGAGCAAATGAAATTAA
 
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rJMSF051M08+          CTTTGCTATCCTAGCCGCTTTACCAGCCTTTTTCCTCTCCCTTGTCGTAATCATGTTGGT
rJMSF019B02+          CTTTGCTATCCTAGCCGCTTTACCAGCCTTTTTCCTCTCCCTTGTCGTAATCATGTTGGT
                      ____________________________________________________________
consensus             CTTTGCTATCCTAGCCGCTTTACCAGCCTTTTTCCTCTCCCTTGTCGTAATCATGTTGGT
 
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rJMSF051M08+          GCGTGCATGGTTTAAACAGGATACTAGAGCGGAAGGCAGGGGAAGAGTTGCTCGAATTCA
rJMSF019B02+          GCGTGCATGGTTTAAACAGGATACTAGAGCGGAAGGCAGGGGAAGAGTTGCTCGAATTCA
                      ____________________________________________________________
consensus             GCGTGCATGGTTTAAACAGGATACTAGAGCGGAAGGCAGGGGAAGAGTTGCTCGAATTCA
 
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rJMSF051M08+          AAGAAGACTCCTTATTGTACAAGTTGAGAGAAGGATTATGCAATTAGAAAGCTGCAAGGA
rJMSF019B02+          AAGAAGACTCCTTATTGTACAAGTTGAGAGAAGGATTATGCAATTAGAAAGCTGCAAGGA
                      ____________________________________________________________
consensus             AAGAAGACTCCTTATTGTACAAGTTGAGAGAAGGATTATGCAATTAGAAAGCTGCAAGGA
 
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rJMSF051M08+          TCAAGGACTAGAAAAGGATGCTCAATTCATTTTCGGCTTGGTGCTTTATTATCTGGACCG
rJMSF019B02+          TCAAGGACTAGAAAAGGATGCTCAATTCATTTTCGGCTTGGTGCTTTATTATCTGGACCG
                      ____________________________________________________________
consensus             TCAAGGACTAGAAAAGGATGCTCAATTCATTTTCGGCTTGGTGCTTTATTATCTGGACCG
 
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rJMSF051M08+          CCTGCACTCTGCAGCAGAGTTGCACGCGAGGGCAACTGGTGAATGGATAAGTTTGAGACA
rJMSF019B02+          CCTGCACTCTGCAGCAGAGTTGCACGCGAGGGCAACTGGTGAATGGATAAGTTTGAGACA
                      ____________________________________________________________
consensus             CCTGCACTCTGCAGCAGAGTTGCACGCGAGGGCAACTGGTGAATGGATAAGTTTGAGACA
 
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rJMSF051M08+          GGATATCATCGATCTAGCAAAACCAGACATCCAGACTGCACATAAACTGAAGATTACTTC
rJMSF019B02+          GGATATCATCGATCTAGCAAAACCAGACATCCAGACTGCACATAAACTGAAGATTACTTC
                      ____________________________________________________________
consensus             GGATATCATCGATCTAGCAAAACCAGACATCCAGACTGCACATAAACTGAAGATTACTTC
 
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rJMSF051M08+          ACGAATGGAGCGCGTCTATGACTGCTTGCTTCCTCTACCGAAACGCCAGTAGTTCTGCCA
rJMSF019B02+          ACGAATGGAGCGCGTCTATGACTGCTTGCTTCCTCTACCGAAACGCCAGTAGTTCTGCCA
                      ____________________________________________________________
consensus             ACGAATGGAGCGCGTCTATGACTGCTTGCTTCCTCTACCGAAACGCCAGTAGTTCTGCCA
 
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rJMSF051M08+          TATCAGCAGCGCTCTCGAGCCCCCCAGCCTTGGAGTAGATCAAGCAATGCTCTACGAGTC
rJMSF019B02+          TATCAGCAGCGCTCTCGAGCCCCCCAGCCTTGGAGTAGATCAAGCAATGCTCTACGAGTC
                      ____________________________________________________________
consensus             TATCAGCAGCGCTCTCGAGCCCCCCAGCCTTGGAGTAGATCAAGCAATGCTCTACGAGTC
 
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rJMSF051M08+          TTGGACTCGCGATTATGTTGCAGCACTTTCTCCATCTCATTTTTGTCATACTTATTCTGG
rJMSF019B02+          TTGGACTCGCGATTATGTTGCAGCACTTTCTCCATCTCATTTTNGTCATACTTATTCTGG
                      ____________________________________________________________
consensus             TTGGACTCGCGATTATGTTGCAGCACTTTCTCCATCTCATTTTTGTCATACTTATTCTGG
 
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rJMSF051M08+          AGCATTTGCTCTTCCAGTTTTCTCTTCTTTCTCTTTTCAGTTTCTGTTATTCTCCTCTGA
rJMSF019B02+          AGCATTTGCTCTTCCAGTTTTCTCTTCTTTCTCTTTTCAGTTTCTGTTATTCTCCTCTGA
                      ____________________________________________________________
consensus             AGCATTTGCTCTTCCAGTTTTCTCTTCTTTCTCTTTTCAGTTTCTGTTATTCTCCTCTGA
 
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rJMSF051M08+          AACTACCCTTATAATACAATTCACCAAGTAACCTTAGTTACTAC                
rJMSF019B02+          AACTACCCTTATAATACAATTCACCAAGTAACCTTAGTTACTACCGGAGTATTAATGAAT
                      ____________________________________________________________
consensus             AACTACCCTTATAATACAATTCACCAAGTAACCTTAGTTACTACCGGAGTATTAATGAAT