Contig 013943:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B06Sequence355010899 (3)741013943 (2)emb|CBI24767.3|5e-117unnamed protein product [Vitis vinifera]
JMSF027K21Sequence658010899 (3)ref|XP_009631237.1|98.6PREDICTED: uncharacterized protein LOC104121047 [Nicotiana tomentosiformis]683013943 (2)emb|CBI24767.3|1e-117unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF027K21+                                   AGTCTTCAACCGGGATCAGCTTGGAAATATATCTT
rJMSF018B06+                                                GATCAGCTTGGAAATATATCTT
                      ____________________________________________________________
consensus                                      AGTCTTCAACCGGGATCAGCTTGGAAATATATCTT
 
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rJMSF027K21+          GGTCTTATGCTGTTTTTGGGCAAATGAGTCGAGTTTTCTTCTCCCATGTGTGGAATACTA
rJMSF018B06+          GGTCTTATGCTGTTTTTGGGCAAATGAGTCGAGTTTTCTTCTCCCATGTGTGGAATACTA
                      ____________________________________________________________
consensus             GGTCTTATGCTGTTTTTGGGCAAATGAGTCGAGTTTTCTTCTCCCATGTGTGGAATACTA
 
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rJMSF027K21+          TGAGCCAATTTGAGGAACAACACATTTCTGAGCAATACAAGGAGGATATCATGTTTGCTT
rJMSF018B06+          TGAGCCAATTTGAGGAACAACACATTTCTGAGCAATACAAGGAGGATATCATGTTTGCTT
                      ____________________________________________________________
consensus             TGAGCCAATTTGAGGAACAACACATTTCTGAGCAATACAAGGAGGATATCATGTTTGCTT
 
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rJMSF027K21+          CTCAAGTTCATCTCGCAAACAAGTGCCTGAAGCTAGAGTACCCAAATCTTCATTTATCTC
rJMSF018B06+          CTCAAGTTCATCTCGCAAACAAGTGCCTGAAGCTAGAGTACCCAAATCTTCATTTATCTC
                      ____________________________________________________________
consensus             CTCAAGTTCATCTCGCAAACAAGTGCCTGAAGCTAGAGTACCCAAATCTTCATTTATCTC
 
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rJMSF027K21+          TTGAGGGTGATCTTGAGGAGAAAATTTCTCATGTTGGAAGAACCAAAAGGTTCAATCAGA
rJMSF018B06+          TTGAGGGTGATCTTGAGGAGAAAATTTCTCATGTTGGAAGAACCAAAAGGTTCAATCAGA
                      ____________________________________________________________
consensus             TTGAGGGTGATCTTGAGGAGAAAATTTCTCATGTTGGAAGAACCAAAAGGTTCAATCAGA
 
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rJMSF027K21+          GGGTGACCTCTTCCTTTCAGGACGAGGTTGCCCGCCTTCTTGTTAGCACTGGGCTAGATT
rJMSF018B06+          GGGTGACCTCTTCCTTTCAGGACGAGGTTGCCCGCCTTCTTGTTAGCACTGGGCTAGATT
                      ____________________________________________________________
consensus             GGGTGACCTCTTCCTTTCAGGACGAGGTTGCCCGCCTTCTTGTTAGCACTGGGCTAGATT
 
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rJMSF027K21+          GGGTAAGAGAATATGATATAGATGGTTACACATTGGATGCAGTTGTGGTTGATAAAAAAA
rJMSF018B06+          GGGTAAGAGAATATGATATAGATGGTTACACATTGGATGCAGTTGTGGTTGATAAAAAAA
                      ____________________________________________________________
consensus             GGGTAAGAGAATATGATATAGATGGTTACACATTGGATGCAGTTGTGGTTGATAAAAAAA
 
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rJMSF027K21+          TTGCTCTCGAGATTGATGGTCCAACACATTTCTCTAGAAACTCTGGATCACCGCTGGGAC
rJMSF018B06+          TTGCTCTCGAGATTGATGGTCCAACACATTTCTCTAGAAACTCTGGATCACCGCTGGGAC
                      ____________________________________________________________
consensus             TTGCTCTCGAGATTGATGGTCCAACACATTTCTCTAGAAACTCTGGATCACCGCTGGGAC
 
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rJMSF027K21+          ATACAATGCTAAAGCGCCGGTACATAACTGCTGCAGGCTGGAAAATTTTATCTGTTTCTC
rJMSF018B06+          ATACAATGCTAAAGCGCCGGTACATAACTGCTGCAGGCTGGAAAATTTTATCTGTTTCTC
                      ____________________________________________________________
consensus             ATACAATGCTAAAGCGCCGGTACATAACTGCTGCAGGCTGGAAAATTTTATCTGTTTCTC
 
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rJMSF027K21+          ACCAGGAATGGGAAAATCTTCAAGGGGGATTCGAGCAGCTAGACTACCTTCGAGAGATTC
rJMSF018B06+          ACCAGGAATGGGAAAATCTTCAAGGGGGATTCGAGCAGCTAGACTACCTTCGAGAGATTC
                      ____________________________________________________________
consensus             ACCAGGAATGGGAAAATCTTCAAGGGGGATTCGAGCAGCTAGACTACCTTCGAGAGATTC
 
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rJMSF027K21+          TCAAAGATCACATCTATGAGGGAACAATAATGCCTTGTTAGAGGGAATAAACATAGAATG
rJMSF018B06+          TCAAAGATCACATCTATGAGGGAACAATAATGCCTTGTTAGAGGGAATAAACATAGAATG
                      ____________________________________________________________
consensus             TCAAAGATCACATCTATGAGGGAACAATAATGCCTTGTTAGAGGGAATAAACATAGAATG
 
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rJMSF027K21+          ATAATGAAATATTAGTACCTACCAGTTGTATAAGTTGTCTTCTTCAAT            
rJMSF018B06+          ATAATGAAATATTAGTACCTA-CAGTTGTATAAGTTGTCTTCTTCAATTTTGATATACAT
                      ____________________________________________________________
consensus             ATAATGAAATATTAGTACCTACCAGTTGTATAAGTTGTCTTCTTCAATTTTGATATACAT
 
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rJMSF018B06+          ATTTTTTATTTATGAAAAAATTTTAGGCCCCTCTTTATTGCAATATTCTGTAATCCCTAG
                      ____________________________________________________________
consensus             ATTTTTTATTTATGAAAAAATTTTAGGCCCCTCTTTATTGCAATATTCTGTAATCCCTAG