Contig 013938:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O04Sequence336003629 (2)ref|XP_009597467.1|9e-51PREDICTED: mini-chromosome maintenance complex-binding protein [Nicotiana tomen580013938 (2)ref|XP_009799229.1|3e-41PREDICTED: mini-chromosome maintenance complex-binding protein [Nicotiana sylve
JMSF035M23Sequence618003629 (2)ref|XP_009597467.1|9e-94PREDICTED: mini-chromosome maintenance complex-binding protein [Nicotiana tomen499013938 (2)ref|XP_010695921.1|1e-22PREDICTED: mini-chromosome maintenance complex-binding protein [Beta vulgaris s

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016O04+ CCGAGGGAAAATCAAACATACTNCCNGCTGATATAGTTTT
                      ____________________________________________________________
consensus CCGAGGGAAAATCAAACATACTNCCNGCTGATATAGTTTT
 
. : . : . : . : . : . :
rJMSF035M23+ CTTCAGTAACTTCCTNTGAAGAAGTTGAGACTGGTGTGCNGTGTGG
rJMSF016O04+ GCCNTTCCGTCCAACTTCNGTAACTTCCTATGAAGAAGTTGAGACTGATGTGCTGTGTGG
                      ____________________________________________________________
consensus GCCNTTCCGTCCAACTTCAGTAACTTCCTATGAAGAAGTTGAGACTGGTGTGCTGTGTGG
 
. : . : . : . : . : . :
rJMSF035M23+ TTGGCGTTGGTACTTGGGTACNANGAAATCNTTGTCNCNTACCNTTGCCCCGGAAATGCN
rJMSF016O04+ TTGGCGTTGGTACTTGGGTACAATGAAATCNTTGTCNCATACCNTTGCCCCGGAAATGCN
                      ____________________________________________________________
consensus TTGGCGTTGGTACTTGGGTACAATGAAATCNTTGTCNCATACCNTTGCCCCGGAAATGCN
 
. : . : . : . : . : . :
rJMSF035M23+ GAAGGTGTTGGAAGATGATTTGGTTGCNNCCNGGCNAGCTGATNGTAGCCTGGGCNGCCN
rJMSF016O04+ GAAGGTGTTGGAAGATGATTTGGTTGCAGCCNGGCAAGCTGATNGTAGCCTGGGCNGCCN
                      ____________________________________________________________
consensus GAAGGTGTTGGAAGATGATTTGGTTGCAGCCNGGCAAGCTGATNGTAGCCTGGGCNGCCN
 
. : . : . : . : . : . :
rJMSF035M23+ AGAATTTAGCNGATTGTTGACAATGGGGCGTTTGATATNTNTTAGTTTCGGNGAAACCNG
rJMSF016O04+ AGAATTTAGCNGATTGTTGNCAATGGGGCGTTTGATATNTNTTAGTTTCGGNGAAACCNG
                      ____________________________________________________________
consensus AGAATTTAGCNGATTGTTGACAATGGGGCGTTTGATATNTNTTAGTTTCGGNGAAACCNG
 
. : . : . : . : . : . :
rJMSF035M23+ CTTGTCGGTTGAGCCCTGGCAAATGGTCAAAGAGTTGGNGNGACTCCNCAAAGAGAGACT
rJMSF016O04+ CTTGTCGGTTGAGCCCTGGCAAATGGTCAAAGAGTTGGNGNGACTCCNCAAAGAGAGACT
                      ____________________________________________________________
consensus CTTGTCGGTTGAGCCCTGGCAAATGGTCAAAGAGTTGGNGNGACTCCNCAAAGAGAGACT
 
. : . : . : . : . : . :
rJMSF035M23+ CAATGGACGCNTGTAAAGTTTNTTTTGTTTCNGACNCCNTTTAGTTAGGTACTAAAATTG
rJMSF016O04+ CAATGGNCGCNNGTAAAGTTTNTTTTGTTTCNGACNCCTTTTAGTTAGGTACTAAAATTG
                      ____________________________________________________________
consensus CAATGGACGCNTGTAAAGTTTNTTTTGTTTCNGACNCCTTTTAGTTAGGTACTAAAATTG
 
. : . : . : . : . : . :
rJMSF035M23+ NGTAAAAAAAAAAACGATAATATTGTGTGTTTTTTTTGGTTGTTGGAAGTGCATCCATTA
rJMSF016O04+ NGTAAAAAAAAAAACGATAATATTGTGTGTTTTTTTTGGTTGTTGGAAGTGCATCCATTA
                      ____________________________________________________________
consensus NGTAAAAAAAAAAACGATAATATTGTGTGTTTTTTTTGGTTGTTGGAAGTGCATCCATTA
 
. : . : . : . : . : . :
rJMSF035M23+ AATCCTCTCTGGCTGTCTGTCTGTAGGGTTATTAAATTATAAGCTCTGCTCAGATTGGAC
rJMSF016O04+ AATCCTCTCTGGCTGTCTGTCTGTAGGGTTATTAAATTATAAGCTCTGCTCAGATTGGAC
                      ____________________________________________________________
consensus AATCCTCTCTGGCTGTCTGTCTGTAGGGTTATTAAATTATAAGCTCTGCTCAGATTGGAC
 
. : . : . : . : . : . :
rJMSF035M23+ CCTTTTTCATCAGATCAGAGGGCTCCATAATGG
rJMSF016O04+ CCTTTTTCATCAGATCAGAGGGCTCCATAATGGTGTATTCAGATTGTATGTTTTATGTTA
                      ____________________________________________________________
consensus CCTTTTTCATCAGATCAGAGGGCTCCATAATGGTGTATTCAGATTGTATGTTTTATGTTA