Contig 013936:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002K11Sequence325013936 (6)ref|XP_011080262.1|1e-42PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 548013936 (6)ref|XP_011080262.1|1e-46PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein
JMSF016K17Sequence453013936 (6)ref|XP_011080262.1|8e-47PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 549013936 (6)ref|XP_011080262.1|1e-46PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein
JMSF050B12Sequence617013936 (6)ref|XP_011080262.1|2e-49PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 556013936 (6)ref|XP_011080262.1|1e-49PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein

Alignment

This contig is upended


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JMSF050B12+                                 TTTTTTTTTTCCACTATAATAATGATATATATTTTAAA
                      ____________________________________________________________
consensus                                   TTTTTTTTTTCCACTATAATAATGATATATATTTTAAA
 
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rJMSF050B12-                                  ATCAAATTTACGTACAACACCCCCAATCATTCCCCA
JMSF050B12+           TGACAATAACACCCTCTGGCCTCAATCAAATTTACGTACAACACCCCCAATCATTCCCCA
                      ____________________________________________________________
consensus             TGACAATAACACCCTCTGGCCTCAATCAAATTTACGTACAACACCCCCAATCATTCCCCA
 
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rJMSF050B12-          GCTTCAAAAGCCAGAAAACCCGGTTCTTTCCCAATCACACTTTCAGAATCTTGGCGGCTC
JMSF002K11-                                                              GGGCGGCTC
JMSF050B12+           GC-TCAAAAGCCAGAAAACCCGGTTCTTTCCCAATCACACTTTCAGAATCTTGGCGGCTC
JMSF016K17-                                                              GGGCGGCTC
rJMSF002K11+                                                             GGGCGGCTC
rJMSF016K17+                                                             GGGCGGCTC
                      ____________________________________________________________
consensus             GCTTCAAAAGCCAGAAAACCCGGTTCTTTCCCAATCACACTTTCAGAATCTGGGCGGCTC
 
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rJMSF050B12-          GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
JMSF002K11-           GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
JMSF050B12+           GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
JMSF016K17-           GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
rJMSF002K11+          GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
rJMSF016K17+          GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
                      ____________________________________________________________
consensus             GGACCACCGGATTTTCCCTCGCGATCGCCTCCCGGCCGGCCGCCTTGTAATCAAACGAAC
 
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rJMSF050B12-          AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
JMSF002K11-           AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
JMSF050B12+           AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
JMSF016K17-           AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
rJMSF002K11+          AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
rJMSF016K17+          AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
                      ____________________________________________________________
consensus             AGTCGTGGCGATCGGAGTATCTGTGCTGGGAGCAGAACACCTCCCCGCACCGGCACCGGA
 
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rJMSF050B12-          ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
JMSF002K11-           ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
JMSF050B12+           ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
JMSF016K17-           ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
rJMSF002K11+          ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
rJMSF016K17+          ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
                      ____________________________________________________________
consensus             ACCCCACTAGCCCGACTTTCCGCCGGCATCCCGCTCCCGAGCACCGGCAAACGTCCCTCG
 
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rJMSF050B12-          GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
JMSF002K11-           GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
JMSF050B12+           GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
JMSF016K17-           GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
rJMSF002K11+          GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
rJMSF016K17+          GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
                      ____________________________________________________________
consensus             GCCTCTTCAAGGACCGAATCTCCGACGCCTCGAAAGCGGTTTTTGTCTCCGATCTTTGCG
 
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rJMSF050B12-          GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
JMSF002K11-           GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
JMSF050B12+           GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
JMSF016K17-           GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
rJMSF002K11+          GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
rJMSF016K17+          GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
                      ____________________________________________________________
consensus             GCGACCCCGCCGGGCTAGATCTCAGGTCGCCAGCGCCGGAGAGTTTCGGATCTGAGCTCT
 
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rJMSF050B12-          CAGGTGATACGGCGGAAGAAGAAGATAGCACGCAGAGAGGTATGGTTTCCGGCACCTTGA
JMSF002K11-           CAGGTGATACGGCGGA                                            
JMSF050B12+           CAGGTGATACGGCGGAAGAAGAAGATAGCACGCAGAGAGGTATGGTTTCCGGCACCTTGA
JMSF016K17-           CAGGTGATACGGCGGAAGAAGAAGATAGCACGCAGAGAGGTATGGTTTCCGGCACCTTGA
rJMSF002K11+          CAGGTGATACGGCGGAAGAAGAAGATAGCACGCAGAGAGGTATGGTTTCCGGCACCTTGA
rJMSF016K17+          CAGGTGATACGGCGGAAGAAGAAGATAGCACGCAGAGAGGTATGGTTTCCGGCACCTTGA
                      ____________________________________________________________
consensus             CAGGTGATACGGCGGAAGAAGAAGATAGCACGCAGAGAGGTATGGTTTCCGGCACCTTGA
 
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rJMSF050B12-          GCTCGGCCTCGTCTTTCTCCCTCTGAGCCGCCATAGCTGCGAAGTTGCGTATGGAGATGA
JMSF050B12+           GCTCGGCCTCGTCTTTCTCCCTCTGAGCCGCCATAGCTGCGAAGTTGCGTATGGAGATGA
JMSF016K17-           GCTCGGCCTCGTCTTTCTCCCTCTGAGCCGCCATAGCTGCGAAGTTGCGTATGGAGATGA
rJMSF002K11+          GCTCGGCCTCGTCTTTCTCCCTCTGAGCCGCCATAGCTGCGAAGTTGCGTATGGAGATGA
rJMSF016K17+          GCTCGGCCTCGTCTTTCTCCCTCTGAGCCGCCATAGCTGCGAAGTTGCGTATGGAGATGA
                      ____________________________________________________________
consensus             GCTCGGCCTCGTCTTTCTCCCTCTGAGCCGCCATAGCTGCGAAGTTGCGTATGGAGATGA
 
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rJMSF050B12-          GATTTGTTGGGAGAGATAGCGGAGCGGAGAGCAGAAAA                      
JMSF050B12+           GATTTGTTGGGAGAGATAGCGGAGCGGAGAGCAGAAAA                      
JMSF016K17-           GATTTGTTGGGAGAGATAGCGGAG                                    
rJMSF002K11+          GATTTGTTGGGAGAGATAGCGGAGCGGAGAGCAGAAAACGAACGTGAAATGGGTTTGGAT
rJMSF016K17+          GATTTGTTGGGAGAGATAGCGGAGCGGAGAGCAGAAAACGAACGTGAAATGGGTTTGGAT
                      ____________________________________________________________
consensus             GATTTGTTGGGAGAGATAGCGGAGCGGAGAGCAGAAAACGAACGTGAAATGGGTTTGGAT
 
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rJMSF002K11+          TATGACTTTTGAGGCTGTTAGCCACCGGTGGGGAAGCCTAACTTTACTTTGTAC      
rJMSF016K17+          TATGACTTTTGAGGCTGTTAGCCACCGGTGGGGAAGCCTAACTTTACTTTGTACCGGAGT
                      ____________________________________________________________
consensus             TATGACTTTTGAGGCTGTTAGCCACCGGTGGGGAAGCCTAACTTTACTTTGTACCGGAGT