Contig 013935:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS153E09Sequence624013935 (6)gb|AGG84230.1|1e-105pescadillo [Nicotiana benthamiana]
JMSF011F16Sequence245003593 (6)ref|XP_004243564.1|7e-20PREDICTED: pescadillo homolog [Solanum lycopersicum]720013935 (6)ref|XP_004243564.1|5e-81PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF012E22Sequence234003593 (6)ref|XP_004243564.1|8e-16PREDICTED: pescadillo homolog [Solanum lycopersicum]793013935 (6)ref|XP_004243564.1|1e-98PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF016F19Sequence243003593 (6)ref|XP_004243564.1|6e-20PREDICTED: pescadillo homolog [Solanum lycopersicum]757013935 (6)ref|XP_004243564.1|1e-85PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF017F15Sequence535003593 (6)ref|XP_004243564.1|1e-72PREDICTED: pescadillo homolog [Solanum lycopersicum]731013935 (6)ref|XP_004243564.1|2e-83PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF040J24Sequence672003593 (6)ref|XP_009606495.1|1e-105PREDICTED: pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028} [Nicotiana tome862013935 (6)ref|XP_004243564.1|1e-106PREDICTED: pescadillo homolog [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS153E09- TCTGATTTGAGACTTGCACANGCTT
                      ____________________________________________________________
consensus TCTGATTTGAGACTTGCACANGCTT
 
. : . : . : . : . : . :
JMFS153E09- CAACACCAACTTCCTTCAAATGAGCCAGGTGCTTTAATGCACCTTGTTGAAGAGGCTGCT
                      ____________________________________________________________
consensus CAACACCAACTTCCTTCAAATGAGCCAGGTGCTTTAATGCACCTTGTTGAAGAGGCTGCT
 
. : . : . : . : . : . :
JMFS153E09- AGCATTGATGAAGACGATGCAGAAACAAGGGAATGCAAGGCCCTCTTGAAGGGAATGAGA
                      ____________________________________________________________
consensus AGCATTGATGAAGACGATGCAGAAACAAGGGAATGCAAGGCCCTCTTGAAGGGAATGAGA
 
. : . : . : . : . : . :
JMFS153E09- TTCTTCTTAAGTCGTGAGGTTCCTAGAGAGTCTCTGCTTTTTATCATTCCTGCTTTCGGT
rJMSF040J24+ CTAGAGAGTCTCTGCTTTTTATCATTCCTGCTTTCGGT
                      ____________________________________________________________
consensus TTCTTCTTAAGTCGTGAGGTTCCTAGAGAGTCTCTGCTTTTTATCATTCCTGCTTTCGGT
 
. : . : . : . : . : . :
JMFS153E09- GGTGTTGTAT-CGTGGGAGGGTGAAGGAGCCCCAATCAAGGAATCTGATCAGAGCATCAC
rJMSF040J24+ GGTGTTGTATNCGTGGGAGGGTGAAGGAGCCCCAATCAAGGAATCTGATCAGAGCATCAC
rJMSF012E22+ ATCAAGGANTNTGATCAGAGCATCNC
                      ____________________________________________________________
consensus GGTGTTGTATNCGTGGGAGGGTGAAGGAGCCCCAATCAAGGAATCTGATCAGAGCATCAC
 
. : . : . : . : . : . :
JMFS153E09- TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
rJMSF040J24+ TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
rJMSF012E22+ TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
rJMSF017F15+ GGGAATATGTTCA
rJMSF011F16+ CA
rJMSF016F19+ TTCTCGGGAATATGTTCA
                      ____________________________________________________________
consensus TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
 
. : . : . : . : . : . :
JMFS153E09- ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF040J24+ ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF012E22+ ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF017F15+ ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF011F16+ ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF016F19+ ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
                      ____________________________________________________________
consensus ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
 
. : . : . : . : . : . :
JMFS153E09- TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF040J24+ TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF012E22+ TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF017F15+ TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF011F16+ TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF016F19+ TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
                      ____________________________________________________________
consensus TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
 
. : . : . : . : . : . :
JMFS153E09- TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF040J24+ TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF012E22+ TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF017F15+ TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF011F16+ TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF016F19+ TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
                      ____________________________________________________________
consensus TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
 
. : . : . : . : . : . :
JMFS153E09- CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF040J24+ CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF012E22+ CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF017F15+ CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF011F16+ CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF016F19+ CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
                      ____________________________________________________________
consensus CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
 
. : . : . : . : . : . :
JMFS153E09- TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF040J24+ TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF012E22+ TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF017F15+ TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF011F16+ TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF016F19+ TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
                      ____________________________________________________________
consensus TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
 
. : . : . : . : . : . :
rJMSF040J24+ AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF012E22+ AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF017F15+ AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF011F16+ AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF016F19+ AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
                      ____________________________________________________________
consensus AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
 
. : . : . : . : . : . :
rJMSF040J24+ TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF012E22+ TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF017F15+ TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF011F16+ TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF016F19+ TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
                      ____________________________________________________________
consensus TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
 
. : . : . : . : . : . :
rJMSF040J24+ TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF012E22+ TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF017F15+ TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF011F16+ TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF016F19+ TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
                      ____________________________________________________________
consensus TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
 
. : . : . : . : . : . :
rJMSF040J24+ GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF012E22+ GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF017F15+ GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF011F16+ GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF016F19+ GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
                      ____________________________________________________________
consensus GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
 
. : . : . : . : . : . :
rJMSF040J24+ GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF012E22+ GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF017F15+ GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF011F16+ GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF016F19+ GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
                      ____________________________________________________________
consensus GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
 
. : . : . : . : . : . :
rJMSF040J24+ TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF012E22+ TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF017F15+ TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF011F16+ TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF016F19+ TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
                      ____________________________________________________________
consensus TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
 
. : . : . : . : . : . :
rJMSF040J24+ TTTTGCCTTAGGGTAAGTTTAAACAAC
rJMSF012E22+ TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGAT
rJMSF017F15+ TTTTGCCNTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCT
rJMSF011F16+ TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCT
rJMSF016F19+ TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCTTGTCAATA
                      ____________________________________________________________
consensus TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCTTGTCAATA