Contig 013935:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS153E09Sequence624013935 (6)gb|AGG84230.1|1e-105pescadillo [Nicotiana benthamiana]
JMSF011F16Sequence245003593 (6)ref|XP_004243564.1|7e-20PREDICTED: pescadillo homolog [Solanum lycopersicum]720013935 (6)ref|XP_004243564.1|5e-81PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF012E22Sequence234003593 (6)ref|XP_004243564.1|8e-16PREDICTED: pescadillo homolog [Solanum lycopersicum]793013935 (6)ref|XP_004243564.1|1e-98PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF016F19Sequence243003593 (6)ref|XP_004243564.1|6e-20PREDICTED: pescadillo homolog [Solanum lycopersicum]757013935 (6)ref|XP_004243564.1|1e-85PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF017F15Sequence535003593 (6)ref|XP_004243564.1|1e-72PREDICTED: pescadillo homolog [Solanum lycopersicum]731013935 (6)ref|XP_004243564.1|2e-83PREDICTED: pescadillo homolog [Solanum lycopersicum]
JMSF040J24Sequence672003593 (6)ref|XP_009606495.1|1e-105PREDICTED: pescadillo homolog {ECO:0000255|HAMAP-Rule:MF_03028} [Nicotiana tome862013935 (6)ref|XP_004243564.1|1e-106PREDICTED: pescadillo homolog [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS153E09-                                              TCTGATTTGAGACTTGCACANGCTT
                      ____________________________________________________________
consensus                                                TCTGATTTGAGACTTGCACANGCTT
 
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JMFS153E09-           CAACACCAACTTCCTTCAAATGAGCCAGGTGCTTTAATGCACCTTGTTGAAGAGGCTGCT
                      ____________________________________________________________
consensus             CAACACCAACTTCCTTCAAATGAGCCAGGTGCTTTAATGCACCTTGTTGAAGAGGCTGCT
 
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JMFS153E09-           AGCATTGATGAAGACGATGCAGAAACAAGGGAATGCAAGGCCCTCTTGAAGGGAATGAGA
                      ____________________________________________________________
consensus             AGCATTGATGAAGACGATGCAGAAACAAGGGAATGCAAGGCCCTCTTGAAGGGAATGAGA
 
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JMFS153E09-           TTCTTCTTAAGTCGTGAGGTTCCTAGAGAGTCTCTGCTTTTTATCATTCCTGCTTTCGGT
rJMSF040J24+                                CTAGAGAGTCTCTGCTTTTTATCATTCCTGCTTTCGGT
                      ____________________________________________________________
consensus             TTCTTCTTAAGTCGTGAGGTTCCTAGAGAGTCTCTGCTTTTTATCATTCCTGCTTTCGGT
 
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JMFS153E09-           GGTGTTGTAT-CGTGGGAGGGTGAAGGAGCCCCAATCAAGGAATCTGATCAGAGCATCAC
rJMSF040J24+          GGTGTTGTATNCGTGGGAGGGTGAAGGAGCCCCAATCAAGGAATCTGATCAGAGCATCAC
rJMSF012E22+                                            ATCAAGGANTNTGATCAGAGCATCNC
                      ____________________________________________________________
consensus             GGTGTTGTATNCGTGGGAGGGTGAAGGAGCCCCAATCAAGGAATCTGATCAGAGCATCAC
 
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JMFS153E09-           TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
rJMSF040J24+          TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
rJMSF012E22+          TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
rJMSF017F15+                                                         GGGAATATGTTCA
rJMSF011F16+                                                                    CA
rJMSF016F19+                                                    TTCTCGGGAATATGTTCA
                      ____________________________________________________________
consensus             TCATCAGATTGTTGATAGGCCGACACAGGGGCACAGATTTCTTTCTCGGGAATATGTTCA
 
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JMFS153E09-           ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF040J24+          ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF012E22+          ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF017F15+          ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF011F16+          ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
rJMSF016F19+          ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
                      ____________________________________________________________
consensus             ACCACAGTGGGTTTTTGATTGTATAAATGCACGCATCATATTGCCAACTGAGGATTACTT
 
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JMFS153E09-           TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF040J24+          TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF012E22+          TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF017F15+          TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF011F16+          TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
rJMSF016F19+          TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
                      ____________________________________________________________
consensus             TGTCGGAAGGGTTCCTCCTCCGCACTTGTCACCTTTTGTTGACAATGAAGCGGAAGGCTA
 
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JMFS153E09-           TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF040J24+          TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF012E22+          TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF017F15+          TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF011F16+          TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
rJMSF016F19+          TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
                      ____________________________________________________________
consensus             TGTCCCTGAATATGCTGAGACCATCAAGCGGCTACAAGCTGCTGCCAGAAGAGAAGTCCT
 
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JMFS153E09-           CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF040J24+          CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF012E22+          CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF017F15+          CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF011F16+          CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
rJMSF016F19+          CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
                      ____________________________________________________________
consensus             CCCAATGCCAGGCGTTGGCATAGAGGATTTGGATGATCCTCAGAATCTACTAGCGGAAGG
 
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JMFS153E09-           TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF040J24+          TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF012E22+          TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF017F15+          TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF011F16+          TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
rJMSF016F19+          TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
                      ____________________________________________________________
consensus             TATTAGTGACCGTGCAGAAGCTATTGCAGCTGCTCAGAAAAAGCAAAAGATGTCTGCTTT
 
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rJMSF040J24+          AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF012E22+          AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF017F15+          AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF011F16+          AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
rJMSF016F19+          AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
                      ____________________________________________________________
consensus             AGAGAAGCAGTATCATGAAGAATTGAAAAGGGAGTTTCAAGGTGCCAAATACTCGACAAT
 
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rJMSF040J24+          TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF012E22+          TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF017F15+          TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF011F16+          TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
rJMSF016F19+          TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
                      ____________________________________________________________
consensus             TTCCAGTGAGAGTAAGGACGCTCCCGAGGACAACAATGCTAATACTGAATCAGTTCCTGA
 
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rJMSF040J24+          TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF012E22+          TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF017F15+          TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF011F16+          TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
rJMSF016F19+          TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
                      ____________________________________________________________
consensus             TGAGCAACAAATTGCCAAGGATGCTGACAACATGTCTAAAATGGTGATGTCTCGCAAAAG
 
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rJMSF040J24+          GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF012E22+          GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF017F15+          GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF011F16+          GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
rJMSF016F19+          GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
                      ____________________________________________________________
consensus             GAGAAACATCTTGGAGGCTGCAGAGATTGGCAGGAAACGGAAAAAGGATAAGGTTGCTCG
 
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rJMSF040J24+          GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF012E22+          GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF017F15+          GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF011F16+          GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
rJMSF016F19+          GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
                      ____________________________________________________________
consensus             GTTGGAGGAAAGGAGGAAAACTTTAAAGAACTCCAAGAAATCTGAAACCAGCTAGGTGCC
 
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rJMSF040J24+          TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF012E22+          TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF017F15+          TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF011F16+          TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
rJMSF016F19+          TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
                      ____________________________________________________________
consensus             TTCATATGCTGTACTGTATTGTTTTCTGATCTGTTCTATATGCCTTGACTGGCACAGAAG
 
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rJMSF040J24+          TTTTGCCTTAGGGTAAGTTTAAACAAC                                 
rJMSF012E22+          TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGAT               
rJMSF017F15+          TTTTGCCNTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCT        
rJMSF011F16+          TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCT        
rJMSF016F19+          TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCTTGTCAATA
                      ____________________________________________________________
consensus             TTTTGCCTTAGGGTAAGTTTAAACAACATATGGTAGAGGATTGATTACTCCTTGTCAATA