Contig 013934:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002L03Sequence365017729ref|XP_006351947.1|2e-15PREDICTED: transmembrane protein 184C-like isoform X2 [Solanum tuberosum]731013934 (3)ref|XP_006422448.1|5e-44hypothetical protein CICLE_v10028324mg [Citrus clementina] gb|ESR35688.1| hypoth
JMSF016E05Sequence570013934 (3)ref|XP_008382422.1|3e-73PREDICTED: uncharacterized protein LOC103445210 isoform X2 [Malus domestica]743013934 (3)ref|XP_008781282.1|2e-42PREDICTED: transmembrane protein 184C isoform X3 [Phoenix dactylifera]

Alignment

This contig is upended


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JMSF016E05-              GACATTCAAGTCAATCGTATTTTTGACTTGGTGGCAAGGTGTGGCTATTGCCCTTTT
                      ____________________________________________________________
consensus                GACATTCAAGTCAATCGTATTTTTGACTTGGTGGCAAGGTGTGGCTATTGCCCTTTT
 
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JMSF016E05-           TTGTAGTCTTGGTATCTTCAAAAGCCCAATTGCTCAAGCCTTGCAGCTTGAATCAAGCAT
                      ____________________________________________________________
consensus             TTGTAGTCTTGGTATCTTCAAAAGCCCAATTGCTCAAGCCTTGCAGCTTGAATCAAGCAT
 
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JMSF016E05-           TCAGGACTTTATTATTTGTATTGAGTACAGATGGGCATTGCTTCTGTGGTACACCTGTAT
                      ____________________________________________________________
consensus             TCAGGACTTTATTATTTGTATTGAGTACAGATGGGCATTGCTTCTGTGGTACACCTGTAT
 
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JMSF016E05-           GTTTTTCCCGCAAAACCATACGAGTTGATGGGTGAGCGCTTTGCTGGAGCTGTATCAGTA
                      ____________________________________________________________
consensus             GTTTTTCCCGCAAAACCATACGAGTTGATGGGTGAGCGCTTTGCTGGAGCTGTATCAGTA
 
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JMSF016E05-           CTAGGGGACTACCTATCTGCTGACTGCCCAATAGATCCCGAGGAGCTTAGAGACAGTGAG
                      ____________________________________________________________
consensus             CTAGGGGACTACCTATCTGCTGACTGCCCAATAGATCCCGAGGAGCTTAGAGACAGTGAG
 
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JMSF016E05-           CGTCCAACTAAACTGCGTCTTCCCCATCCTAGTATTGATGATTCTAACAAAACAACAATC
rJMSF002L03+                             TTCCCCATCCTAGTATTGATGATTCTAACAAAACAACAATC
rJMSF016E05+                                               ATGATTCTNACAAANCAACAATC
                      ____________________________________________________________
consensus             CGTCCAACTAAACTGCGTCTTCCCCATCCTAGTATTGATGATTCTAACAAAACAACAATC
 
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JMSF016E05-           AGAGAGAGTGTTCGGGATGTTTTTATGGGTGCTGGTGAATATATTGTGAATGATGTGAAA
rJMSF002L03+          AGAGAGAGTGTTCGGGATGTTTTTATGGGTGCTGGTGAATATATTGTGAATGATGTGAAA
rJMSF016E05+          AGAGAGAGTGTTCGGGATGTTTTTATGGGTGCTGGTGAATATATTGTGAATGATGTGAAA
                      ____________________________________________________________
consensus             AGAGAGAGTGTTCGGGATGTTTTTATGGGTGCTGGTGAATATATTGTGAATGATGTGAAA
 
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JMSF016E05-           TTCACTGTAAATCAAGCCGTGGAGCCTATGGAGAAGGGATTCACAAAGTTCAATCAGAAA
rJMSF002L03+          TTCACTGTAAATCAAGCCGTGGAGCCTATGGAGAAGGGATTCACAAAGTTCAATCAGAAA
rJMSF016E05+          TTCACTGTAAATCAAGCCGTGGAGCCTATGGAGAAGGGATTCACAAAGTTCAATCAGAAA
                      ____________________________________________________________
consensus             TTCACTGTAAATCAAGCCGTGGAGCCTATGGAGAAGGGATTCACAAAGTTCAATCAGAAA
 
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JMSF016E05-           CTGCATAAAATCTCTCAAAACATGAAGCACGCCAAAAACAAGAGAGCGAAGGACGATAGT
rJMSF002L03+          CTGCATAAAATCTCTCAAAACATGAAGCACGCCAAAAACAAGAGAGCGAAGGACGATAGT
rJMSF016E05+          CTGCATAAAATCTCTCAAAACATGAAGCACGCCAAAAACAAGAGAGCGAAGGACGATAGT
                      ____________________________________________________________
consensus             CTGCATAAAATCTCTCAAAACATGAAGCACGCCAAAAACAAGAGAGCGAAGGACGATAGT
 
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JMSF016E05-           TCCATGGCGACGACATCATCCCAAGCCCAGA                             
rJMSF002L03+          TCCATGGCGACGACATCATCCCAAGCCCAGAGGGTTATACGTGGAATAGACGACCCTCTT
rJMSF016E05+          TCCATGGCGACGACATCATCCCAAGCCCAGAGGGTTATACGTGGAATAGACGACCCTCTT
                      ____________________________________________________________
consensus             TCCATGGCGACGACATCATCCCAAGCCCAGAGGGTTATACGTGGAATAGACGACCCTCTT
 
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rJMSF002L03+          TTAAATGGAAGCATCAGTGACAGCGGGACACCCACACCCTCTCGGAAAAAGAAACAACGT
rJMSF016E05+          TTAAATGGAAGCATCAGTGACAGCGGGACACCCACACCCTCTCGGAAAAAGAAACAACGT
                      ____________________________________________________________
consensus             TTAAATGGAAGCATCAGTGACAGCGGGACACCCACACCCTCTCGGAAAAAGAAACAACGT
 
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rJMSF002L03+          CGGAAAACAGGATACACAAGCGAAAGCGGTGGCGAAAGCAGCAGCGATTGTACTTCTGGT
rJMSF016E05+          CGGAAAACAGGATACACAAGCGAAAGCGGTGGCGAAAGCAGCAGCGATTGTACTTCTGGT
                      ____________________________________________________________
consensus             CGGAAAACAGGATACACAAGCGAAAGCGGTGGCGAAAGCAGCAGCGATTGTACTTCTGGT
 
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rJMSF002L03+          GGTTTCCAAATACGCGGCCGCCGGTGGGTTACCAAAGACTAGGTAGGGAGAAGAATCCTG
rJMSF016E05+          GGTTTCCAAATACGCGGCCGCCGGTGGGTTACCAAAGACTAGGTAGGGAGAAGAATCCTG
                      ____________________________________________________________
consensus             GGTTTCCAAATACGCGGCCGCCGGTGGGTTACCAAAGACTAGGTAGGGAGAAGAATCCTG
 
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rJMSF002L03+          ACCATCCAGATCGAAGAAGGAAGATTGATCGAGGAGAATAGCTAAAACATCTTGCCATCA
rJMSF016E05+          ACCATCCAGATCGAAGAAGGAAGATTGATCGAGGAGAATAGCTAAAACATCTTGCCATCA
                      ____________________________________________________________
consensus             ACCATCCAGATCGAAGAAGGAAGATTGATCGAGGAGAATAGCTAAAACATCTTGCCATCA
 
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rJMSF002L03+          AGTTGGGCTGATGATGAGACCAGACTTTCACTTCTGCCACAAGCTAGAACAGATCACTGC
rJMSF016E05+          AGTTGGGCTGATGATGAGACCAGACTTTCACTTCTGCCACAAGCTAGAACAGATCACTGC
                      ____________________________________________________________
consensus             AGTTGGGCTGATGATGAGACCAGACTTTCACTTCTGCCACAAGCTAGAACAGATCACTGC
 
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rJMSF002L03+          AATATAGTGTTGCTTTCTGCTCAACTTAAAGCTTTTATCCAGAGGTTGTGCCATTATCTC
rJMSF016E05+          AATATAGTGTTGCTTTCTGCTCAACTTAAAGCTTTTATCCAGAGGTTGTGCCATTATCTC
                      ____________________________________________________________
consensus             AATATAGTGTTGCTTTCTGCTCAACTTAAAGCTTTTATCCAGAGGTTGTGCCATTATCTC
 
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rJMSF002L03+          CTTGGATGATCAAAGTGTCTGTGTTTGAATATATAGACCTATCTGTGTATAATTGTTGTA
rJMSF016E05+          CTTGGATGATCAAAGTGTCTGTGTTTGAATATATAGACCTATCTGTGTATAATTGTTGTA
                      ____________________________________________________________
consensus             CTTGGATGATCAAAGTGTCTGTGTTTGAATATATAGACCTATCTGTGTATAATTGTTGTA
 
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rJMSF002L03+          ACACACACATAACGGCCTACAAAAATGGCT                              
rJMSF016E05+          ACACACACATAACGGCCTACAAAAATGGCTTGTAATTCGATTAATGTGCGTAATATTAAA
                      ____________________________________________________________
consensus             ACACACACATAACGGCCTACAAAAATGGCTTGTAATTCGATTAATGTGCGTAATATTAAA