Contig 013930:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034E02Sequence573013930 (4)emb|CDO98052.1|2e-108unnamed protein product [Coffea canephora]729013930 (4)emb|CDO98052.1|4e-112unnamed protein product [Coffea canephora]
JMSF015P04Sequence440013930 (4)ref|XP_002325470.2|6e-82hypothetical protein POPTR_0019s08100g [Populus trichocarpa] gb|EEE99851.2| hypo757013930 (4)emb|CDO98052.1|4e-111unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF034E02-                                          ATTTTCACCAAAAGTCAGTTGTTTTTTTC
                      ____________________________________________________________
consensus                                            ATTTTCACCAAAAGTCAGTTGTTTTTTTC
 
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JMSF015P04-            GCAACTTCCGACCATTGTATCTCCAGAATTTTCTGATCAAAGATTTCCAGAGGGCGCTT
JMFF034E02-           TGCAACTTCCGACCATTGTATCTCCAGAATTTTCTGATCAAAGATTTCCAGAGGGCGCTT
rJMFF034E02+                                                       TTCCAGAGGGCGCTT
rJMSF015P04+                                 CCAGAATTTTCTGATCAAAGATTTCCAGAGGGCGCTT
                      ____________________________________________________________
consensus             TGCAACTTCCGACCATTGTATCTCCAGAATTTTCTGATCAAAGATTTCCAGAGGGCGCTT
 
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JMSF015P04-           TTCGTAGCATGGCCTTGGTTACGACTGCAGAAGTATGTGACGCAAACCCACAGCTAATTG
JMFF034E02-           TTCGTAGCATGGCCTTGGTTACGACTGCAGAAGTATGTGACGCAAACCCACAGCTAATTG
rJMFF034E02+          TTCGTAGCATGGCCTTGGTTACGACTGCAGAAGTATGTGACGCAAACCCACAGCTAATTG
rJMSF015P04+          TTCGTAGCATGGCCTTGGTTACGACTGCAGAAGTATGTGACGCAAACCCACAGCTAATTG
                      ____________________________________________________________
consensus             TTCGTAGCATGGCCTTGGTTACGACTGCAGAAGTATGTGACGCAAACCCACAGCTAATTG
 
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JMSF015P04-           TGAGCGGGGAGCTCCGTGCTCTCCAGCCAATTTTCCAGATATATGGCAGGCGCCAAGTGT
JMFF034E02-           TGAGCGGGGAGCTCCGTGCTCTCCAGCCAATTTTCCAGATATATGGCAGGCGCCAAGTGT
rJMFF034E02+          TGAGCGGGGAGCTCCGTGCTCTCCAGCCAATTTTCCAGATATATGGCAGGCGCCAAGTGT
rJMSF015P04+          TGAGCGGGGAGCTCCGTGCTCTCCAGCCAATTTTCCAGATATATGGCAGGCGCCAAGTGT
                      ____________________________________________________________
consensus             TGAGCGGGGAGCTCCGTGCTCTCCAGCCAATTTTCCAGATATATGGCAGGCGCCAAGTGT
 
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JMSF015P04-           TCTCCGGTCCAATTGTCACCCTGAAAGTGTTTGAAGATAACGTTTTGGTACGCGAATTTC
JMFF034E02-           TCTCCGGTCCAATTGTCACCCTGAAAGTGTTTGAAGATAACGTTTTGGTACGCGAATTTC
rJMFF034E02+          TCTCCGGTCCAATTGTCACCCTGAAAGTGTTTGAAGATAACGTTTTGGTACGCGAATTTC
rJMSF015P04+          TCTCCGGTCCAATTGTCACCCTGAAAGTGTTTGAAGATAACGTTTTGGTACGCGAATTTC
                      ____________________________________________________________
consensus             TCTCCGGTCCAATTGTCACCCTGAAAGTGTTTGAAGATAACGTTTTGGTACGCGAATTTC
 
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JMSF015P04-           TTGAGGAGAAAGGCAATGGCAGGGTTTTGGTTGTTGACGGGGGTGGCAGTTTGAGGTGCG
JMFF034E02-           TTGAGGAGAAAGGCAATGGCAGGGTTTTGGTTGTTGACGGGGGTGGCAGTTTGAGGTGCG
rJMFF034E02+          TTGAGGAGAAAGGCAATGGCAGGGTTTTGGTTGTTGACGGGGGTGGCAGTTTGAGGTGCG
rJMSF015P04+          TTGAGGAGAAAGGCAATGGCAGGGTTTTGGTTGTTGACGGGGGTGGCAGTTTGAGGTGCG
                      ____________________________________________________________
consensus             TTGAGGAGAAAGGCAATGGCAGGGTTTTGGTTGTTGACGGGGGTGGCAGTTTGAGGTGCG
 
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JMSF015P04-           CAATCTTGGGTGGCAACCCCGTGGTGCAAGCTCAGAACAACGGGTGGGCGGGAATCGTGG
JMFF034E02-           CAATCTTGGGTGGCAACCCCGTGGTGCAAGCTCAGAACAACGGGTGGGCGGGAATCGTGG
rJMFF034E02+          CAATCTTGGGTGGCAACCCCGTGGTGCAAGCTCAGAACAACGGGTGGGCGGGAATCGTGG
rJMSF015P04+          CAATCTTGGGTGGCAACCCCGTGGTGCAAGCTCAGAACAACGGGTGGGCGGGAATCGTGG
                      ____________________________________________________________
consensus             CAATCTTGGGTGGCAACCCCGTGGTGCAAGCTCAGAACAACGGGTGGGCGGGAATCGTGG
 
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JMSF015P04-           TCAACGGCTGCATAAGGGACGTGGATGAGATCAGCGGTTGTGACATCGGGGTGCGGGCTT
JMFF034E02-           TCAACGGCTGCATAAGGGACGTGGATGAGATCAACGGTTGTGACATCGGGGTGCGGGCTT
rJMFF034E02+          TCAACGGCTGCATAAGGGACGTGGATGAGATCAACGGTTGTGACATCGGGGTGCGGGCTT
rJMSF015P04+          TCAACGGCTGCATAAGGGACGTGGATGAGATCAGCGGTTGTGACATCGGGGTGCGGGCTT
                      ____________________________________________________________
consensus             TCAACGGCTGCATAAGGGACGTGGATGAGATCAGCGGTTGTGACATCGGGGTGCGGGCTT
 
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JMSF015P04-           TGGCTTCCCATCCGATGAAA                                        
JMFF034E02-           TGGCTTCCCATCCGATGAAAGCCAACAAGAAGGGTATCGGGGAAAAGCACGTTCCAATAA
rJMFF034E02+          TGGCTTCCCATCCGATGAAAGCCAACAAGAAGGGTATCGGGGAAAAGCACGTTCCAATAA
rJMSF015P04+          TGGCTTCCCATCCGATGAAAGCCAACAAGAAGGGTATCGGGGAAAAGCACGTTCCAATAA
                      ____________________________________________________________
consensus             TGGCTTCCCATCCGATGAAAGCCAACAAGAAGGGTATCGGGGAAAAGCACGTTCCAATAA
 
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JMFF034E02-           CTATCGCTGGGACCAGAATCTGCGATGGGGAATGGCTTTACGCTGATACTGATGGTATTC
rJMFF034E02+          CTATCGCTGGGACCAGAATCTGCGATGGGGAATGGCTTTACGCTGATACTGATGGTATTC
rJMSF015P04+          CTATCGCTGGGACCAGAATCTGCGATGGGGAATGGCTTTACGCTGATACTGATGGTATTC
                      ____________________________________________________________
consensus             CTATCGCTGGGACCAGAATCTGCGATGGGGAATGGCTTTACGCTGATACTGATGGTATTC
 
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JMFF034E02-           TAAT                                                        
rJMFF034E02+          TAATCTCCCGAAATGAGCTTTCCGTGTAACTCTGGACCTCGTCTCGCCACATTCTTCGTT
rJMSF015P04+          TAATCTCCCGAAATGAGCTTTCCGTGTAACTCTGGACCTCGTCTCGCCACATTCTTCGTT
                      ____________________________________________________________
consensus             TAATCTCCCGAAATGAGCTTTCCGTGTAACTCTGGACCTCGTCTCGCCACATTCTTCGTT
 
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rJMFF034E02+          CTTGA-GAATGAAGTTGTGGCAAAACATTGTTTCGCGGAGATTATGAAAGCATATATGCA
rJMSF015P04+          CTTGAGGAATGAAGTTGTGGCAAAACATTGTTTCGCGGAGATTATGAAAGCATATATGCA
                      ____________________________________________________________
consensus             CTTGAGGAATGAAGTTGTGGCAAAACATTGTTTCGCGGAGATTATGAAAGCATATATGCA
 
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rJMFF034E02+          TCATTTTCATGTATTATTTCCTGGTATTGCTCTATAATATATTCATTTGGGATGTTATAT
rJMSF015P04+          TCATTTTCATGTATTATTTCCTGGTATTGCTCTATAATATATTCATTTGGGATGTTATAT
                      ____________________________________________________________
consensus             TCATTTTCATGTATTATTTCCTGGTATTGCTCTATAATATATTCATTTGGGATGTTATAT
 
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rJMFF034E02+          TCTCCTTTGAAGATGATGTTTTTATGAACCGCACAAGGGATTTGTAATTACTATT     
rJMSF015P04+          TCTCCTTTGAAGATGATGTTTTTATGAACCGCACAAGGGATTTGTAATTACTATTTATGT
                      ____________________________________________________________
consensus             TCTCCTTTGAAGATGATGTTTTTATGAACCGCACAAGGGATTTGTAATTACTATTTATGT