Contig 013928:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015L17Sequence527013928 (2)ref|XP_010662965.1|110PREDICTED: uncharacterized protein LOC100264257 [Vitis vinifera]775013928 (2)ref|XP_006361259.1|1e-96PREDICTED: uncharacterized protein LOC102582811 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF015L17-                                                                     GC
                      ____________________________________________________________
consensus                                                                       GC
 
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JMSF015L17-           AGAGGTCGAGGGCAAAGCGATTGGAGGTCAGTGAAGAAGAAACAATGACATTAGCAGAGA
                      ____________________________________________________________
consensus             AGAGGTCGAGGGCAAAGCGATTGGAGGTCAGTGAAGAAGAAACAATGACATTAGCAGAGA
 
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JMSF015L17-           TGCAAATGATAGTGAAGAAGTTGAATAAGGAGAAATTGAGAGCAAAGGTGAATGAGATGG
                      ____________________________________________________________
consensus             TGCAAATGATAGTGAAGAAGTTGAATAAGGAGAAATTGAGAGCAAAGGTGAATGAGATGG
 
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JMSF015L17-           TGACGAAGCCNAACTTAGGGGAGAAGGAGCTGGAAAGCGAAAAGGAGGATACAGAGTTGT
                      ____________________________________________________________
consensus             TGACGAAGCCNAACTTAGGGGAGAAGGAGCTGGAAAGCGAAAAGGAGGATACAGAGTTGT
 
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JMSF015L17-           GTTTGAGTGAAACAGAAAGTGAAATAGAGGAAGCTATGGAGACCATGAATGTGAAAGGAA
                      ____________________________________________________________
consensus             GTTTGAGTGAAACAGAAAGTGAAATAGAGGAAGCTATGGAGACCATGAATGTGAAAGGAA
 
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JMSF015L17-           AGAGGGAGAGACGTAAGGTGTCAAAAGGGGAGAGCTTGGAAGCGGTGCAAAGAAGAGCTA
                      ____________________________________________________________
consensus             AGAGGGAGAGACGTAAGGTGTCAAAAGGGGAGAGCTTGGAAGCGGTGCAAAGAAGAGCTA
 
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JMSF015L17-           CAAAGGGTGGAGATCTGGGTGCCAAGAGGCGCAAAGTGTCTATAATAGTTGATTCAGAGA
                      ____________________________________________________________
consensus             CAAAGGGTGGAGATCTGGGTGCCAAGAGGCGCAAAGTGTCTATAATAGTTGATTCAGAGA
 
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JMSF015L17-           TAATGTCAGTGGAAGGTTCAGACTTTTACGAATTTGGTAATGATAGAGAGGAGAGGAGTT
                      ____________________________________________________________
consensus             TAATGTCAGTGGAAGGTTCAGACTTTTACGAATTTGGTAATGATAGAGAGGAGAGGAGTT
 
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JMSF015L17-           TCAAGAAAGGACAAGTGTGGGCTGTTTATAATGACGATATAGATGATGGAATGCCCAGGT
rJMSF015L17+               AAAGGACAAGTGTGGGCTGTTTATAATGACGATATAGATGATGGAATGCCAAGGT
                      ____________________________________________________________
consensus             TCAAGAAAGGACAAGTGTGGGCTGTTTATAATGACGATATAGATGATGGAATGCCCAGGT
 
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JMSF015L17-           ATTATGCTTTGATTGATGAAGTGTTGTCTGTGAATCCTTTTGAGG               
rJMSF015L17+          ATTATGCTTTGATTGATGAAGTGTTGTCTGTGAATCCTTTTGAGGTGCGATTGTTTTGGT
                      ____________________________________________________________
consensus             ATTATGCTTTGATTGATGAAGTGTTGTCTGTGAATCCTTTTGAGGTGCGATTGTTTTGGT
 
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rJMSF015L17+          TGGACTTACAAAATAATGATGATGAGGCATTGATTAATTGGGGAAAAAGGGGGTTTCACA
                      ____________________________________________________________
consensus             TGGACTTACAAAATAATGATGATGAGGCATTGATTAATTGGGGAAAAAGGGGGTTTCACA
 
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rJMSF015L17+          TATCCTGTGGCAAATATAAGGTTTCTGAGCAAGCTTTGGTGAAATCCCTGAAAAAGTTCT
                      ____________________________________________________________
consensus             TATCCTGTGGCAAATATAAGGTTTCTGAGCAAGCTTTGGTGAAATCCCTGAAAAAGTTCT
 
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rJMSF015L17+          CTCATGTCATGGATTGTGAAAGAGCAGCTAGAGCATTGTACAGGGTTTACCCTAAAAAGG
                      ____________________________________________________________
consensus             CTCATGTCATGGATTGTGAAAGAGCAGCTAGAGCATTGTACAGGGTTTACCCTAAAAAGG
 
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rJMSF015L17+          GTTCAGTTTGGGCAATCTACGAGGAAAATAACCCAAACGCCGATCAAGATGTTGAGGGCA
                      ____________________________________________________________
consensus             GTTCAGTTTGGGCAATCTACGAGGAAAATAACCCAAACGCCGATCAAGATGTTGAGGGCA
 
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rJMSF015L17+          AGCAGTACGGTATTGTTGTATGTTTAACCAGTTATACTGAAATACACGGCCTGAGTGTGG
                      ____________________________________________________________
consensus             AGCAGTACGGTATTGTTGTATGTTTAACCAGTTATACTGAAATACACGGCCTGAGTGTGG
 
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rJMSF015L17+          CATACCTTGAGAAGGTTGATGGTTTTAGGACAGTTTTCAAGAGAAGAGAGATCGGGGCTC
                      ____________________________________________________________
consensus             CATACCTTGAGAAGGTTGATGGTTTTAGGACAGTTTTCAAGAGAAGAGAGATCGGGGCTC
 
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rJMSF015L17+          ACGCCATTAGATGGCTCGGGAAGGATGAAATTACACTGATGTCCCACCAAATTCCTGCCA
                      ____________________________________________________________
consensus             ACGCCATTAGATGGCTCGGGAAGGATGAAATTACACTGATGTCCCACCAAATTCCTGCCA
 
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rJMSF015L17+          AGAAACTTTCTGGGGAAGAGGCAGTTGGCATTTCTAAAGAATGTTGGGAACTGGATCCAG
                      ____________________________________________________________
consensus             AGAAACTTTCTGGGGAAGAGGCAGTTGGCATTTCTAAAGAATGTTGGGAACTGGATCCAG
 
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rJMSF015L17+          CTTCAGTTCCTTCTAAGATGCTCACTATTGATCAGAGTAAATAGCTTCCACCCTTGTACT
                      ____________________________________________________________
consensus             CTTCAGTTCCTTCTAAGATGCTCACTATTGATCAGAGTAAATAGCTTCCACCCTTGTACT
 
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rJMSF015L17+          TGATATAAGTTACTTGCATTGAAATTGTGAGTGCCCATTGGTTTATTAATTAGTCATTTC
                      ____________________________________________________________
consensus             TGATATAAGTTACTTGCATTGAAATTGTGAGTGCCCATTGGTTTATTAATTAGTCATTTC
 
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rJMSF015L17+          AGGCAATATAATATAGATTTAAAAGTTGAATTCTTTTAGTAAGGGAACTGGTGAAGAGAT
                      ____________________________________________________________
consensus             AGGCAATATAATATAGATTTAAAAGTTGAATTCTTTTAGTAAGGGAACTGGTGAAGAGAT