Contig 013927:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015J14Sequence598007858 (3)ref|XP_009611066.1|5e-34PREDICTED: probable inactive tRNA-specific adenosine deaminase-like protein 3 i775013927 (2)emb|CDO97564.1|2e-65unnamed protein product [Coffea canephora]
JMSF019E10Sequence245007858 (3)770013927 (2)emb|CDO97564.1|2e-65unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF019E10+               GGAAGTGGGCGGAGCAACAATTTAGTGCTAGCTTCAGCTCTTGGCATCCTTTAAG
rJMSF015J14+               GGAAGTGGGCGGAGCAACAATTTAGTGCTAGCTTCAGCTCTTGGCATCCTTTAAG
                      ____________________________________________________________
consensus                  GGAAGTGGGCGGAGCAACAATTTAGTGCTAGCTTCAGCTCTTGGCATCCTTTAAG
 
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rJMSF019E10+          GCATGCGGCTATAGTTGCTATTGACCATTCAGCTACCAGGGATCGACAGCTTTTTCCCTC
rJMSF015J14+          GCATGCGGCTATAGTTGCTATTGACCATTCAGCTACCAGGGATCGACAGCTTTTTCCCTC
                      ____________________________________________________________
consensus             GCATGCGGCTATAGTTGCTATTGACCATTCAGCTACCAGGGATCGACAGCTTTTTCCCTC
 
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rJMSF019E10+          TGCAGGATATAATGGATATCATTTTGCTCAAGAGGATTGTGTGCTTTCTCCTCTAGTTGG
rJMSF015J14+          TGCAGGATATAATGGATATCATTTTGCTCAAGAGGATTGTGTGCTTTCTCCTCTAGTTGG
                      ____________________________________________________________
consensus             TGCAGGATATAATGGATATCATTTTGCTCAAGAGGATTGTGTGCTTTCTCCTCTAGTTGG
 
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rJMSF019E10+          GTCTCCATCAAAAAGGCAAAAGGTCAATCCAACAGATGTGAAGGATATGGAAAATCAAAC
rJMSF015J14+          GTCTCCATCAAAAAGGCAAAAGGTCAATCCAACAGATGTGAAGGATATGGAAAATCAAAC
                      ____________________________________________________________
consensus             GTCTCCATCAAAAAGGCAAAAGGTCAATCCAACAGATGTGAAGGATATGGAAAATCAAAC
 
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rJMSF019E10+          TGTAAACCCTTCTGAATCAAGCAGACCTTATTTATGTACGGGCTATGACATCTACCTTGT
rJMSF015J14+          TGTAAACCCTTCTGAATCAAGCAGACCTTATTTATGTACGGGCTATGACATCTACCTTGT
                      ____________________________________________________________
consensus             TGTAAACCCTTCTGAATCAAGCAGACCTTATTTATGTACGGGCTATGACATCTACCTTGT
 
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rJMSF019E10+          TTGGGAGCCATGTTCTATGTGTGCAATGGCCCTTGTCCATCAAAGAGTTAGGCGTATCTT
rJMSF015J14+          TTGGGAGCCATGTTCTATGTGTGCAATGGCCCTTGTCCATCAAAGAGTTAGGCGTATCTT
                      ____________________________________________________________
consensus             TTGGGAGCCATGTTCTATGTGTGCAATGGCCCTTGTCCATCAAAGAGTTAGGCGTATCTT
 
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rJMSF019E10+          TTATGCTTTCCCAAATCTTAATGCTGGTGCGCTTGGAAGTGTTCACAGATTACAAGGGGA
rJMSF015J14+          TTATGCTTTCCCAAATCTTAATGCTGGTGCGCTTGGAAGTGTTCACAGATTACAAGGGGA
                      ____________________________________________________________
consensus             TTATGCTTTCCCAAATCTTAATGCTGGTGCGCTTGGAAGTGTTCACAGATTACAAGGGGA
 
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rJMSF019E10+          AAGAAGCTTGAATCACCACTATGCTGTTTTCAGGGTTTTGTTGCCCAAAGATATTTCGAG
rJMSF015J14+          AAGAAGCTTGAATCACCACTATGCTGTTTTCAGGGTTTTGTTGCCCAAAGATATTTCGAG
                      ____________________________________________________________
consensus             AAGAAGCTTGAATCACCACTATGCTGTTTTCAGGGTTTTGTTGCCCAAAGATATTTCGAG
 
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rJMSF019E10+          CGCCGAAGCATTAGATGCTGGAACTACTCTGAATGATGAAACCATAGTTCAAGTATCATG
rJMSF015J14+          CGCCGAAGCATTAGATGCTGGAACTACTCTGAATGATGAAACCATAGTTCAAGTATCATG
                      ____________________________________________________________
consensus             CGCCGAAGCATTAGATGCTGGAACTACTCTGAATGATGAAACCATAGTTCAAGTATCATG
 
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rJMSF019E10+          CTAAGTGACCCGCTTTTTACTGCATCTATAAGATTCTGCCCAGCCTTAGCAATTTGAGAG
rJMSF015J14+          CTAAGTGACCCGCTTTTTACTGCATCTATAAGATTCTGCCCAGCCTTAGCAATTTGAGAG
                      ____________________________________________________________
consensus             CTAAGTGACCCGCTTTTTACTGCATCTATAAGATTCTGCCCAGCCTTAGCAATTTGAGAG
 
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rJMSF019E10+          AGATTAGAAGAGACTATTAGATGTCAGATGATGAGTATAATATCAAGTTTTGGATTCATC
rJMSF015J14+          AGATTAGAAGAGACTATTAGATGTCAGATGATGAGTATAATATCAAGTTTTGGATTCATC
                      ____________________________________________________________
consensus             AGATTAGAAGAGACTATTAGATGTCAGATGATGAGTATAATATCAAGTTTTGGATTCATC
 
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rJMSF019E10+          AAACTTGGAAGACAGACAAGAATGCAGTGCAACCTTGTGAGATCATCCAATTTGTGTCTT
rJMSF015J14+          AAACTTGGAAGACAGACAAGAATGCAGTGCAACCTTGTGAGATCATCCAATTTGTGTCTT
                      ____________________________________________________________
consensus             AAACTTGGAAGACAGACAAGAATGCAGTGCAACCTTGTGAGATCATCCAATTTGTGTCTT
 
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rJMSF019E10+          AACTTGTAGCTTCAAATTTTTTCTTCTTTAGTTGTAAC                      
rJMSF015J14+          AACTTGTAGCTTCAAATTTTTTCTTCTTTAGTTGTAACAGTTCATGTTTGTATACTCCAT
                      ____________________________________________________________
consensus             AACTTGTAGCTTCAAATTTTTTCTTCTTTAGTTGTAACAGTTCATGTTTGTATACTCCAT