Contig 013926:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010J17Sequence469000981 (34)gb|ABO33631.1|5e-97monodehydroascorbate reductase [Ipomoea batatas]717013926 (2)emb|CDP11956.1|3e-62unnamed protein product [Coffea canephora]
JMSF015H22Sequence146018880767013926 (2)ref|XP_009620263.1|9e-76PREDICTED: uncharacterized protein slp1-like [Nicotiana tomentosiformis] ref|XP_

Alignment

This contig is upended


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rJMFF010J17+                  CTGTTCCGGAGAAGAAGTTTGCATCTGATCAAAGAAA-CAGTGAGCAGAAAC
rJMSF015H22+                      TCCGGAGANGAAGTTTGCATCTGATCAAAGAAACCAGTGAGCAGAAA-
                      ____________________________________________________________
consensus                     CTGTTCCGGAGAAGAAGTTTGCATCTGATCAAAGAAACCAGTGAGCAGAAAC
 
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rJMFF010J17+          CCTATGACCACCCAGCACTCATTGGCTGAAGATGGTCATAATTCCGAAACTGACCCTGAA
rJMSF015H22+          CCTATGACCACCCAGCACTCATTGGCTGAAGATGGTCATAATTCCGAAACTGACCCTGAA
                      ____________________________________________________________
consensus             CCTATGACCACCCAGCACTCATTGGCTGAAGATGGTCATAATTCCGAAACTGACCCTGAA
 
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rJMFF010J17+          CTTGAACACTCTGATGTCAAGCATGAAGTGATAACAGCTAACGTGCTTGATGAGGAAATT
rJMSF015H22+          CTTGAACACTCTGATGTCAAGCATGAAGTGATAACAGCTAACGTGCCTGATGAGGAAATT
                      ____________________________________________________________
consensus             CTTGAACACTCTGATGTCAAGCATGAAGTGATAACAGCTAACGTGCTTGATGAGGAAATT
 
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rJMFF010J17+          AACCATCTGCAAGTAAACCGGATGCCTGGAGATAGTGTTCTGAAAATTCTAATGAAAAAA
rJMSF015H22+          AACCATCTGCAAGTAAACCGGATGCCTGGAGATAGTGTTCTGAAAATTCTAATGAAAAAA
                      ____________________________________________________________
consensus             AACCATCTGCAAGTAAACCGGATGCCTGGAGATAGTGTTCTGAAAATTCTAATGAAAAAA
 
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rJMFF010J17+          GTTCAATCCCTTGATATCAATTTATCTGTCCTAGAGCGGTATCTGGAAGAGCTGAATTCT
rJMSF015H22+          GTTCAATCCCTTGATATCAATTTATCTGTCCTAGAGCGGTATCTGGAAGAGCTGAATTCT
                      ____________________________________________________________
consensus             GTTCAATCCCTTGATATCAATTTATCTGTCCTAGAGCGGTATCTGGAAGAGCTGAATTCT
 
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rJMFF010J17+          AGATACGGAAAGATTTTTACAGAATTCGACAAAGAAATATTAGATAAAGACTCCATTCTT
rJMSF015H22+          AGATACGGAAAGATTTTTACAGAATTTGACAAAGAAATATTAGATAAAGACTCCATTCTT
                      ____________________________________________________________
consensus             AGATACGGAAAGATTTTTACAGAATTTGACAAAGAAATATTAGATAAAGACTCCATTCTT
 
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rJMFF010J17+          GAGAAGATCACATCAGACATAAAGAGTTTATCCAAGAGCAGGGATGCCATGAGTAAGGAG
rJMSF015H22+          GAGAAGATCACATCAGACATAAAGAGTTTATCCAAGAGCAGGGATGCCATGAGTAAGGAG
                      ____________________________________________________________
consensus             GAGAAGATCACATCAGACATAAAGAGTTTATCCAAGAGCAGGGATGCCATGAGTAAGGAG
 
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rJMFF010J17+          GTCAATGATCTCATTTCTTGGAAATCCCTTATTTCCATGCAGCTGGAACAGATAATAATT
rJMSF015H22+          GTCAATGATCTCATTTCTTGGAAATCCCTTATTTCCATGCAGCTGGAACAGATAATAATT
                      ____________________________________________________________
consensus             GTCAATGATCTCATTTCTTGGAAATCCCTTATTTCCATGCAGCTGGAACAGATAATAATT
 
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rJMFF010J17+          GACAATTCTAATCTCAGGTTGAAGGTGGAAGAGGTTCAGCAGAGACAAGTATATATGGAA
rJMSF015H22+          GACAATTCTAATCTCAGGTTGAAGGTGGAAGAGGTTCAGCAGAGACAAGTATATATGGAA
                      ____________________________________________________________
consensus             GACAATTCTAATCTCAGGTTGAAGGTGGAAGAGGTTCAGCAGAGACAAGTATATATGGAA
 
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rJMFF010J17+          AGTAAAGGAATTATCATTTTTCTAGTATGTTTAATATTTGGAGTGTTAGCAGTTTTAAGG
rJMSF015H22+          AGTAAAGGAATTATCATTTTTCTAGTATGTTTAATATTTGGAGTGTTAGCAGTTTTAAGG
                      ____________________________________________________________
consensus             AGTAAAGGAATTATCATTTTTCTAGTATGTTTAATATTTGGAGTGTTAGCAGTTTTAAGG
 
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rJMFF010J17+          GTG-TTATAGATTTAGTGTTGAGCATTTATAGGTCTGAGAATTCCAGGAAATTTTGTTCT
rJMSF015H22+          GTGTTTATAGATTTAGTGTTGAGCATTTATAGGTCTGAGAATTCCAGGAAATTTTGTTCT
                      ____________________________________________________________
consensus             GTGTTTATAGATTTAGTGTTGAGCATTTATAGGTCTGAGAATTCCAGGAAATTTTGTTCT
 
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rJMFF010J17+          AAGGATTCTTCCTGGATTTTTTTACTGTCTAGCTGTAGCATCACTATTATCATCCTGGCC
rJMSF015H22+          AAGGATTCTTCCTGGATTTTTTTACTGTCTAGCTGTAGCATCACTATTATCATCCTGGCC
                      ____________________________________________________________
consensus             AAGGATTCTTCCTGGATTTTTTTACTGTCTAGCTGTAGCATCACTATTATCATCCTGGCC
 
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rJMFF010J17+          TTATAAT                                                     
rJMSF015H22+          TTATAATTGAGTTCATGATTTACACATTTTCATTCAACTTCTTGTTGATCAAATATATAT
                      ____________________________________________________________
consensus             TTATAATTGAGTTCATGATTTACACATTTTCATTCAACTTCTTGTTGATCAAATATATAT