Contig 013924:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015F01Sequence310009289 (2)emb|CDP00326.1|1e-05unnamed protein product [Coffea canephora]760013924 (2)emb|CDP00326.1|5e-49unnamed protein product [Coffea canephora]
JMSF019K12Sequence523009289 (2)ref|XP_011075498.1|1e-06PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 1 [Sesamum indicum]757013924 (2)ref|XP_006438676.1|8e-51hypothetical protein CICLE_v10031315mg [Citrus clementina] ref|XP_006483162.1| P

Alignment

This contig is upended


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rJMSF019K12+                               GGCTGCAAGAGGACAAAGAGGAAATGAAGAGAAACTCCA
rJMSF015F01+                             GAGGCTGCAAGAGGACAAAGAGGAAATGAAGAG-AACTCCA
                      ____________________________________________________________
consensus                                GAGGCTGCAAGAGGACAAAGAGGAAATGAAGAGAAACTCCA
 
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rJMSF019K12+          TAGAAGTTTTTGGCTCTCCTGTACTGGATAATAAGCCTGCAGGGAGGAAATCCTTCAACC
rJMSF015F01+          TAGAAGTTTTTGGCTCTCCTGTACTGGATAATAAGCCTGCAGGGAGGAAATCCTTCAACC
                      ____________________________________________________________
consensus             TAGAAGTTTTTGGCTCTCCTGTACTGGATAATAAGCCTGCAGGGAGGAAATCCTTCAACC
 
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rJMSF019K12+          TTGAGAGAAGGCTAACAATGGTGGCTTGGGATGCAATTGCTCCAAGATCAGAGACCGAAA
rJMSF015F01+          TTGAGAGAAGGCTAACAATGGTGGCTTGGGATGCAATTGCTCCAAGATCAGAGACCGAAA
                      ____________________________________________________________
consensus             TTGAGAGAAGGCTAACAATGGTGGCTTGGGATGCAATTGCTCCAAGATCAGAGACCGAAA
 
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rJMSF019K12+          ACCCCCTGAGCTCCAACGGGATTGACTACGATACAGCAAGCGAAGCAAGCTCAGACTTGT
rJMSF015F01+          ACCCCCTGAGCTCCAACGGGATTGACTACGATACAGCAAGCGAAGCAAGCTCAGACTTGT
                      ____________________________________________________________
consensus             ACCCCCTGAGCTCCAACGGGATTGACTACGATACAGCAAGCGAAGCAAGCTCAGACTTGT
 
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rJMSF019K12+          TCGAGATCGAGAGCTTCCCGGGCAGCTCCAATCCATTCCTTCCCTGTCTCACCCCAACAA
rJMSF015F01+          TCGAGATCGAGAGCTTCCCGGGCAGCTCCAATCCATTCCTTCCCTGTCTCACCCCAACAA
                      ____________________________________________________________
consensus             TCGAGATCGAGAGCTTCCCGGGCAGCTCCAATCCATTCCTTCCCTGTCTCACCCCAACAA
 
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rJMSF019K12+          CATCTTACGCCCCAAGCGAAGCCAGCATCGAGTGGAGCGTCGTGACAGCCAGCGCAGCTG
rJMSF015F01+          CATCTTACGCCCCAAGCGAAGCCAGCATCGAGTGGAGCGTCGTGACAGCCAGCGCAGCTG
                      ____________________________________________________________
consensus             CATCTTACGCCCCAAGCGAAGCCAGCATCGAGTGGAGCGTCGTGACAGCCAGCGCAGCTG
 
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rJMSF019K12+          ATTTCTCCGTAGCATCCGACACAGAAGACCCAAAAACTCTCTCCTCCTCAGCAACCTTTC
rJMSF015F01+          ATTTCTCCGTAGCATCCGACACAGAAGACCCAAAAACTCTCTCCTCCTCAGCAACCTTTC
                      ____________________________________________________________
consensus             ATTTCTCCGTAGCATCCGACACAGAAGACCCAAAAACTCTCTCCTCCTCAGCAACCTTTC
 
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rJMSF019K12+          ACAGATCAATCCAAAATGGAAGAGAATTGGTGGCCAAGGAGAAGCCAAAGCGGCTCCCAA
rJMSF015F01+          ACAGATCAATCCAAAATGGAAGAGAATTGGTGGCCAAGGAGAAGCCAAAGCGGCTCCCAA
                      ____________________________________________________________
consensus             ACAGATCAATCCAAAATGGAAGAGAATTGGTGGCCAAGGAGAAGCCAAAGCGGCTCCCAA
 
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rJMSF019K12+          GCATTCTCCTCGGGTGCAAGAGCCAGAAGGCGGTTGTCGTTGCTGGAGACGCATACAGAA
rJMSF015F01+          GCATTCTCCTCGGGTGCAAGAGCCAGAAGGCGGTTGTCGTTGCTGGAGACGCATACAGAA
                      ____________________________________________________________
consensus             GCATTCTCCTCGGGTGCAAGAGCCAGAAGGCGGTTGTCGTTGCTGGAGACGCATACAGAA
 
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rJMSF019K12+          CAGCAAGCGAAAAGACACCCCCCGGGCCCGGGGGGGCTCGAAAGCACCACAGCTCCGAGG
rJMSF015F01+          CAGCAAGCGAAAAGACACCCCCCGGGCCCGGGGGGGCTCGAAAGCACCACAGCTCCGAGG
                      ____________________________________________________________
consensus             CAGCAAGCGAAAAGACACCCCCCGGGCCCGGGGGGGCTCGAAAGCACCACAGCTCCGAGG
 
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rJMSF019K12+          CCTTTCTGCCATTGACAAGGTTTCATGCTGAGAGCAAGATAGGAACAGGTTTTGGTGACA
rJMSF015F01+          CCTTTCTGCCATTGACAAGGTTTCATGCTGAGAGCAAGATAGGAACAGGTTTTGGTGACA
                      ____________________________________________________________
consensus             CCTTTCTGCCATTGACAAGGTTTCATGCTGAGAGCAAGATAGGAACAGGTTTTGGTGACA
 
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rJMSF019K12+          GAAATGCAGGATCATTCTCCGCCTCGATCTCTCACCGCGAGGCGCATGTATTGTATATCT
rJMSF015F01+          GAAATGCAGGATCATTCTCCGCCTCGATCTCTCACCGCGAGGCGCATGTATTGTATATCT
                      ____________________________________________________________
consensus             GAAATGCAGGATCATTCTCCGCCTCGATCTCTCACCGCGAGGCGCATGTATTGTATATCT
 
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rJMSF019K12+          AGATATATATGTAGATTTCACTTCTCAAAACTGAATTTCCATGAATAAAAAGAGTCCA  
rJMSF015F01+          AGATATATATGTAGATTTCACTTCTCAAAACTGAATTTCCATGAATAAAAAGAGTCCATT
                      ____________________________________________________________
consensus             AGATATATATGTAGATTTCACTTCTCAAAACTGAATTTCCATGAATAAAAAGAGTCCATT