Contig 013920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038P06Sequence633013920 (2)emb|CDP08976.1|7e-57unnamed protein product [Coffea canephora]
JMSF014B11Sequence499022073ref|XP_009781981.1|6e-36PREDICTED: receptor-like protein kinase HERK 1 [Nicotiana sylvestris] ref|XP_009777013920 (2)gb|AAQ82660.1|2e-121Pto-like serine/threonine kinase [Capsicum chinense]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN038P06+ TATCATA
                      ____________________________________________________________
consensus TATCATA
 
. : . : . : . : . : . :
JMFN038P06+ TAATGNATAAGATGAAATTTTACATAAAAAGACTGAACAGTGCAAAAGGCAGATAAGATC
                      ____________________________________________________________
consensus TAATGNATAAGATGAAATTTTACATAAAAAGACTGAACAGTGCAAAAGGCAGATAAGATC
 
. : . : . : . : . : . :
JMFN038P06+ TGTATCAAAAACACTAAAATTCACAAACACTTTGGTATGAGATTTNTAAGCAATCCACAA
                      ____________________________________________________________
consensus TGTATCAAAAACACTAAAATTCACAAACACTTTGGTATGAGATTTNTAAGCAATCCACAA
 
. : . : . : . : . : . :
JMFN038P06+ AACAAACATCATAAGACACTGTGTTTTTGTTCTTCATAGTTAAATGAACAAACCTCTAAG
rJMSF014B11- GTGTTTTTGTTCTTCATAGTTAAATGAACAAACCTCTAAG
                      ____________________________________________________________
consensus AACAAACATCATAAGACACTGTGTTTTTGTTCTTCATAGTTAAATGAACAAACCTCTAAG
 
. : . : . : . : . : . :
JMFN038P06+ GTGGCAGGCATAAACAAAGGACTTAGAAATGGGAAACTGGGAACTTACTGCTAGGACACA
rJMSF014B11- GTGGCAGGCATAAACAAAGGACTTAGAAATGGGAAACTGGGAACTTACTGCTAGGACACA
                      ____________________________________________________________
consensus GTGGCAGGCATAAACAAAGGACTTAGAAATGGGAAACTGGGAACTTACTGCTAGGACACA
 
. : . : . : . : . : . :
JMFN038P06+ AGTTATGTACTGTCATTACCTCTTTGGTTTATTCTGCATTATTTTCATCTACCTTCAGAC
rJMSF014B11- AGTTATGTACTGTCATTACCTCTTTGGTTTATTCTGCATTATTTTCATCTACCTTCAGAC
                      ____________________________________________________________
consensus AGTTATGTACTGTCATTACCTCTTTGGTTTATTCTGCATTATTTTCATCTACCTTCAGAC
 
. : . : . : . : . : . :
JMFN038P06+ TTCACCAGCTGCGAGAAAACCCGGCTCATGGAAACGCCAGAAAGATCGTCCAAGTTTGTG
rJMSF014B11- TTCACCAGCTGCGAGAAAACCCGGCTCATGGAAACGCCAGAAAGATCGTCCAAGTTTGTG
                      ____________________________________________________________
consensus TTCACCAGCTGCGAGAAAACCCGGCTCATGGAAACGCCAGAAAGATCGTCCAAGTTTGTG
 
. : . : . : . : . : . :
JMFN038P06+ GCTTCGCCCTGGGTGGGAGAGGCTTCGATGTGGCTGAAGTTGTTGACTTGCGGGGAGAGG
rJMSF014B11- GCTTCGCCCTGGGTGGGAGAGGCTTCGATGTGGCTGAAGTTGTTGACTTGCGGGGAGAGG
                      ____________________________________________________________
consensus GCTTCGCCCTGGGTGGGAGAGGCTTCGATGTGGCTGAAGTTGTTGACTTGCGGGGAGAGG
 
. : . : . : . : . : . :
JMFN038P06+ TCGCCGATGAGGTTTGTGCTGTTCTCGTCGGGATCGTTTTGGATGACAGCCTCTTGCAGT
rJMSF014B11- TCGCCGATGAGGTTTGTGCTGTTCTCGTCGGGATCGTTTTGGATGACAGCCTCTTGCAGT
                      ____________________________________________________________
consensus TCGCCGATGAGGTTTGTGCTGTTCTCGTCGGGATCGTTTTGGATGACAGCCTCTTGCAGT
 
. : . : . : . : . : . :
JMFN038P06+ TGGAGGGCGTACTCGAGGTTCCACAGCACGTCTCCCATCGAGGGCCTGTCCACGCCAAAA
rJMSF014B11- TGGAGGGCGTACTCGAGGTTCCACAGCACGTCTCCCATCGAGGGCCTGTCCACGCCAAAA
                      ____________________________________________________________
consensus TGGAGGGCGTACTCGAGGTTCCACAGCACGTCTCCCATCGAGGGCCTGTCCACGCCAAAA
 
. : . : . : . : . : . :
JMFN038P06+ TCAGCTAAGCATTTCTCGCCTGTTTCTCCAAACTTTCTGAGGGAATCGGGCCTTATTCTC
rJMSF014B11- TCAGCTAAGCATTTCTCGCCTGTTTCTCCAAACTTTCTGAGGGAATCGGGCCTTATTCTC
                      ____________________________________________________________
consensus TCAGCTAAGCATTTCTCGCCTGTTTCTCCAAACTTTCTGAGGGAATCGGGCCTTATTCTC
 
. : . : . : . : . : . :
JMFN038P06+ CCCACGAGTTTGGGGTCGATGATTTG
rJMSF014B11- CCCACGAGTTTGGGGTCGATGATTTGTTCCAGCTGCCCTTTCTTTTGCCATTTCATTGCC
                      ____________________________________________________________
consensus CCCACGAGTTTGGGGTCGATGATTTGTTCCAGCTGCCCTTTCTTTTGCCATTTCATTGCC
 
. : . : . : . : . : . :
rJMSF014B11- CATTCGGCTAGGTTCACCATTTCCCTTGGCAGAGATGGATCTATCACGGGCCTAGCGCAG
                      ____________________________________________________________
consensus CATTCGGCTAGGTTCACCATTTCCCTTGGCAGAGATGGATCTATCACGGGCCTAGCGCAG
 
. : . : . : . : . : . :
rJMSF014B11- AGAACCTCAAACATAACCACACCAAACGAGTAGACATCTGATTTCTCTGTTAGTTGCTGG
                      ____________________________________________________________
consensus AGAACCTCAAACATAACCACACCAAACGAGTAGACATCTGATTTCTCTGTTAGTTGCTGG
 
. : . : . : . : . : . :
rJMSF014B11- CGTCTGAAGTATTCGGGATCAAGGTACCCAAAGCTACCTTTCACCGCTGTGCTGACATGA
                      ____________________________________________________________
consensus CGTCTGAAGTATTCGGGATCAAGGTACCCAAAGCTACCTTTCACCGCTGTGCTGACATGA
 
. : . : . : . : . : . :
rJMSF014B11- GTTTGGTCGATCTCGGGGCCAGTCTTGGACAGCCCCAAAGTCAGCAACTTTGGCCATTAA
                      ____________________________________________________________
consensus GTTTGGTCGATCTCGGGGCCAGTCTTGGACAGCCCCAAAGTCAGCAACTTTGGCCATTAA