Contig 013920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038P06Sequence633013920 (2)emb|CDP08976.1|7e-57unnamed protein product [Coffea canephora]
JMSF014B11Sequence499022073ref|XP_009781981.1|6e-36PREDICTED: receptor-like protein kinase HERK 1 [Nicotiana sylvestris] ref|XP_009777013920 (2)gb|AAQ82660.1|2e-121Pto-like serine/threonine kinase [Capsicum chinense]

Alignment

This contig is upended


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JMFN038P06+                                                                TATCATA
                      ____________________________________________________________
consensus                                                                  TATCATA
 
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JMFN038P06+           TAATGNATAAGATGAAATTTTACATAAAAAGACTGAACAGTGCAAAAGGCAGATAAGATC
                      ____________________________________________________________
consensus             TAATGNATAAGATGAAATTTTACATAAAAAGACTGAACAGTGCAAAAGGCAGATAAGATC
 
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JMFN038P06+           TGTATCAAAAACACTAAAATTCACAAACACTTTGGTATGAGATTTNTAAGCAATCCACAA
                      ____________________________________________________________
consensus             TGTATCAAAAACACTAAAATTCACAAACACTTTGGTATGAGATTTNTAAGCAATCCACAA
 
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JMFN038P06+           AACAAACATCATAAGACACTGTGTTTTTGTTCTTCATAGTTAAATGAACAAACCTCTAAG
rJMSF014B11-                              GTGTTTTTGTTCTTCATAGTTAAATGAACAAACCTCTAAG
                      ____________________________________________________________
consensus             AACAAACATCATAAGACACTGTGTTTTTGTTCTTCATAGTTAAATGAACAAACCTCTAAG
 
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JMFN038P06+           GTGGCAGGCATAAACAAAGGACTTAGAAATGGGAAACTGGGAACTTACTGCTAGGACACA
rJMSF014B11-          GTGGCAGGCATAAACAAAGGACTTAGAAATGGGAAACTGGGAACTTACTGCTAGGACACA
                      ____________________________________________________________
consensus             GTGGCAGGCATAAACAAAGGACTTAGAAATGGGAAACTGGGAACTTACTGCTAGGACACA
 
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JMFN038P06+           AGTTATGTACTGTCATTACCTCTTTGGTTTATTCTGCATTATTTTCATCTACCTTCAGAC
rJMSF014B11-          AGTTATGTACTGTCATTACCTCTTTGGTTTATTCTGCATTATTTTCATCTACCTTCAGAC
                      ____________________________________________________________
consensus             AGTTATGTACTGTCATTACCTCTTTGGTTTATTCTGCATTATTTTCATCTACCTTCAGAC
 
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JMFN038P06+           TTCACCAGCTGCGAGAAAACCCGGCTCATGGAAACGCCAGAAAGATCGTCCAAGTTTGTG
rJMSF014B11-          TTCACCAGCTGCGAGAAAACCCGGCTCATGGAAACGCCAGAAAGATCGTCCAAGTTTGTG
                      ____________________________________________________________
consensus             TTCACCAGCTGCGAGAAAACCCGGCTCATGGAAACGCCAGAAAGATCGTCCAAGTTTGTG
 
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JMFN038P06+           GCTTCGCCCTGGGTGGGAGAGGCTTCGATGTGGCTGAAGTTGTTGACTTGCGGGGAGAGG
rJMSF014B11-          GCTTCGCCCTGGGTGGGAGAGGCTTCGATGTGGCTGAAGTTGTTGACTTGCGGGGAGAGG
                      ____________________________________________________________
consensus             GCTTCGCCCTGGGTGGGAGAGGCTTCGATGTGGCTGAAGTTGTTGACTTGCGGGGAGAGG
 
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JMFN038P06+           TCGCCGATGAGGTTTGTGCTGTTCTCGTCGGGATCGTTTTGGATGACAGCCTCTTGCAGT
rJMSF014B11-          TCGCCGATGAGGTTTGTGCTGTTCTCGTCGGGATCGTTTTGGATGACAGCCTCTTGCAGT
                      ____________________________________________________________
consensus             TCGCCGATGAGGTTTGTGCTGTTCTCGTCGGGATCGTTTTGGATGACAGCCTCTTGCAGT
 
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JMFN038P06+           TGGAGGGCGTACTCGAGGTTCCACAGCACGTCTCCCATCGAGGGCCTGTCCACGCCAAAA
rJMSF014B11-          TGGAGGGCGTACTCGAGGTTCCACAGCACGTCTCCCATCGAGGGCCTGTCCACGCCAAAA
                      ____________________________________________________________
consensus             TGGAGGGCGTACTCGAGGTTCCACAGCACGTCTCCCATCGAGGGCCTGTCCACGCCAAAA
 
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JMFN038P06+           TCAGCTAAGCATTTCTCGCCTGTTTCTCCAAACTTTCTGAGGGAATCGGGCCTTATTCTC
rJMSF014B11-          TCAGCTAAGCATTTCTCGCCTGTTTCTCCAAACTTTCTGAGGGAATCGGGCCTTATTCTC
                      ____________________________________________________________
consensus             TCAGCTAAGCATTTCTCGCCTGTTTCTCCAAACTTTCTGAGGGAATCGGGCCTTATTCTC
 
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JMFN038P06+           CCCACGAGTTTGGGGTCGATGATTTG                                  
rJMSF014B11-          CCCACGAGTTTGGGGTCGATGATTTGTTCCAGCTGCCCTTTCTTTTGCCATTTCATTGCC
                      ____________________________________________________________
consensus             CCCACGAGTTTGGGGTCGATGATTTGTTCCAGCTGCCCTTTCTTTTGCCATTTCATTGCC
 
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rJMSF014B11-          CATTCGGCTAGGTTCACCATTTCCCTTGGCAGAGATGGATCTATCACGGGCCTAGCGCAG
                      ____________________________________________________________
consensus             CATTCGGCTAGGTTCACCATTTCCCTTGGCAGAGATGGATCTATCACGGGCCTAGCGCAG
 
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rJMSF014B11-          AGAACCTCAAACATAACCACACCAAACGAGTAGACATCTGATTTCTCTGTTAGTTGCTGG
                      ____________________________________________________________
consensus             AGAACCTCAAACATAACCACACCAAACGAGTAGACATCTGATTTCTCTGTTAGTTGCTGG
 
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rJMSF014B11-          CGTCTGAAGTATTCGGGATCAAGGTACCCAAAGCTACCTTTCACCGCTGTGCTGACATGA
                      ____________________________________________________________
consensus             CGTCTGAAGTATTCGGGATCAAGGTACCCAAAGCTACCTTTCACCGCTGTGCTGACATGA
 
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rJMSF014B11-          GTTTGGTCGATCTCGGGGCCAGTCTTGGACAGCCCCAAAGTCAGCAACTTTGGCCATTAA
                      ____________________________________________________________
consensus             GTTTGGTCGATCTCGGGGCCAGTCTTGGACAGCCCCAAAGTCAGCAACTTTGGCCATTAA