Contig 013914:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013A14Sequence473013914 (2)782013914 (2)ref|XP_009600272.1|3e-34PREDICTED: uncharacterized protein LOC104095776 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF013A14-                                                                 GGCTCG
                      ____________________________________________________________
consensus                                                                   GGCTCG
 
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JMSF013A14-           CTTTTACAGTTAGCTCCTCCCGGCAACAACATAGCCGCCGCTGCTTCCAGGCGTGAATAA
                      ____________________________________________________________
consensus             CTTTTACAGTTAGCTCCTCCCGGCAACAACATAGCCGCCGCTGCTTCCAGGCGTGAATAA
 
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JMSF013A14-           TAGGAGCAGAAGAAAAATGATAAAAAGGCGATTTTACAAGCTTGAACATGGTGATAGAGA
                      ____________________________________________________________
consensus             TAGGAGCAGAAGAAAAATGATAAAAAGGCGATTTTACAAGCTTGAACATGGTGATAGAGA
 
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JMSF013A14-           TGCTCCTTCCGAGTCTTCTTCATCTTCCTCTGACTCTGAAGCAGAGGCAGAAGGAACGGA
                      ____________________________________________________________
consensus             TGCTCCTTCCGAGTCTTCTTCATCTTCCTCTGACTCTGAAGCAGAGGCAGAAGGAACGGA
 
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JMSF013A14-           AGAAGAAGAAGAATATGATGACGAAGAAGACGAAGAACAGGAAATTCACTCAGAAGAAGA
rJMSF013A14+                                                                    GA
                      ____________________________________________________________
consensus             AGAAGAAGAAGAATATGATGACGAAGAAGACGAAGAACAGGAAATTCACTCAGAAGAAGA
 
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JMSF013A14-           ATATGATGATGATCACAAAGATAATGATGCCGTCACTGAAATGGGAAACAAAATGTGTCT
rJMSF013A14+          ATNTGATGATGNTCNCAAAGATAATGATGCCGTCACTGAAATGGGAANCAAAATGTGTCT
                      ____________________________________________________________
consensus             ATATGATGATGATCACAAAGATAATGATGCCGTCACTGAAATGGGAAACAAAATGTGTCT
 
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JMSF013A14-           GTTTCTTCATCATCCGGAAATGAGAGTGAAGATAGTTCGGGAAATGAAGTTAAGGATGAC
rJMSF013A14+          GTTTCTTCATCATCCGGAAATGAGAGTGAAGATAGTTCGGGAAATGAAGTTAAGGATGAC
                      ____________________________________________________________
consensus             GTTTCTTCATCATCCGGAAATGAGAGTGAAGATAGTTCGGGAAATGAAGTTAAGGATGAC
 
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JMSF013A14-           AAATCAGGGCTGCTGACAAGTGATGATGACATTGGAACTGAAATTGACCAAAAAAGGATT
rJMSF013A14+          AAATCAGGGCTGCTGACAAGTGATGATGACATTGGAACTGAAATTGACCAAAAAAGGATT
                      ____________________________________________________________
consensus             AAATCAGGGCTGCTGACAAGTGATGATGACATTGGAACTGAAATTGACCAAAAAAGGATT
 
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JMSF013A14-           AGTCAAACTAAGTCTGAAGAGCGTGATATCCTTTGTGGAAATTCAGA             
rJMSF013A14+          AGTCAAACTAAGTCTGAAGAGCGTGATATCCTTTGTGGAAATTCAGAGTACATCTTGAAA
                      ____________________________________________________________
consensus             AGTCAAACTAAGTCTGAAGAGCGTGATATCCTTTGTGGAAATTCAGAGTACATCTTGAAA
 
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rJMSF013A14+          TGTAAATCTGTTTTCAAGTGCCGGATATGTCCTAGAGTAGTATGCTTGTCAGGTGAAACC
                      ____________________________________________________________
consensus             TGTAAATCTGTTTTCAAGTGCCGGATATGTCCTAGAGTAGTATGCTTGTCAGGTGAAACC
 
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rJMSF013A14+          TTGCATGCTCACCTCAACTCCAAAAGACATGCCAGATCTGAGAAATTGCTAAAAGAAGGT
                      ____________________________________________________________
consensus             TTGCATGCTCACCTCAACTCCAAAAGACATGCCAGATCTGAGAAATTGCTAAAAGAAGGT
 
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rJMSF013A14+          AGGCTAAAGCTTATGCTCAATGACCGTGGGAAGATTGATGGAGAGGAGGAGGCCGAGGAG
                      ____________________________________________________________
consensus             AGGCTAAAGCTTATGCTCAATGACCGTGGGAAGATTGATGGAGAGGAGGAGGCCGAGGAG
 
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rJMSF013A14+          CATTCTCCAAAGAGAGAGCAAAAGAAAACTGAGACGACAAGAGCCAAAGGATTGAAGAAG
                      ____________________________________________________________
consensus             CATTCTCCAAAGAGAGAGCAAAAGAAAACTGAGACGACAAGAGCCAAAGGATTGAAGAAG
 
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rJMSF013A14+          CAGAGGCCGGGGAAGGAATCAAGGAAGGAAAATGAACAATACGCAGGCACACAAACTGGA
                      ____________________________________________________________
consensus             CAGAGGCCGGGGAAGGAATCAAGGAAGGAAAATGAACAATACGCAGGCACACAAACTGGA
 
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rJMSF013A14+          CGACATAGGACAAAGAACCAAGCCAAGAGGAGACGGAAAGACGACAGATAAAAAGTGTGA
                      ____________________________________________________________
consensus             CGACATAGGACAAAGAACCAAGCCAAGAGGAGACGGAAAGACGACAGATAAAAAGTGTGA
 
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rJMSF013A14+          TTAGCTCTCACTTTTTATGCTTTGGCCAAATAAAATGGCTTTTGTGTTTTCAAAAATTAA
                      ____________________________________________________________
consensus             TTAGCTCTCACTTTTTATGCTTTGGCCAAATAAAATGGCTTTTGTGTTTTCAAAAATTAA
 
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rJMSF013A14+          AGGAAGAGTTTAATATGTTGAAATATATTTAATTGAGAGTAATATTATGTGATTTTGGTT
                      ____________________________________________________________
consensus             AGGAAGAGTTTAATATGTTGAAATATATTTAATTGAGAGTAATATTATGTGATTTTGGTT
 
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rJMSF013A14+          CAAATCGATTTTGTCAGTGGACAACCATGTTGAGATGAACTTTAGATGGGAGACTAGGAG
                      ____________________________________________________________
consensus             CAAATCGATTTTGTCAGTGGACAACCATGTTGAGATGAACTTTAGATGGGAGACTAGGAG