Contig 013913:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013A04Sequence256022066ref|XP_006356761.1|4e-49PREDICTED: CBL-interacting protein kinase 2-like [Solanum tuberosum]739013913 (2)ref|XP_009602782.1|2e-51PREDICTED: CBL-interacting protein kinase 2-like [Nicotiana tomentosiformis]
JMSF024E06Sequence630024180dbj|BAG41961.1|3e-12CBL-interacting protein kinase 1 [Vicia faba]741013913 (2)ref|XP_010326216.1|8e-66PREDICTED: LOW QUALITY PROTEIN: CBL-interacting protein kinase 2-like [Solanum

Alignment

This contig is upended


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rJMSF024E06+                       CCAAACCCTAAATCCAGGATTTCCATTGCCAAAATAATGGAAAGTTC
                      ____________________________________________________________
consensus                          CCAAACCCTAAATCCAGGATTTCCATTGCCAAAATAATGGAAAGTTC
 
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rJMSF024E06+          TTGGTTCAGAAAGGGTTTGGATTTGAAAGCGGGTCCTGATTCTAGATCCAAAGACACTGA
rJMSF013A04+                                                   CTAGATCCAAAGACACTGA
                      ____________________________________________________________
consensus             TTGGTTCAGAAAGGGTTTGGATTTGAAAGCGGGTCCTGATTCTAGATCCAAAGACACTGA
 
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rJMSF024E06+          GGCAAAGGAGGCCTTAGTTGATGTTTGTGAAAGCATCAACAAGACAACAGAGGCAAACCA
rJMSF013A04+          GGCAAAGGAGGCCTTAGTTGATGTTTGTGAAAGCATCACCAAGACAACAGAGGCAAACCA
                      ____________________________________________________________
consensus             GGCAAAGGAGGCCTTAGTTGATGTTTGTGAAAGCATCACCAAGACAACAGAGGCAAACCA
 
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rJMSF024E06+          AGAATCTGAAAAGCTCAAAAACTTGAACGCGTTTGATATCATCTCATTTTCATCAGGTTT
rJMSF013A04+          AGAATCTGAAAAGCTCAAAAACTTGAACGCGTTTGATATCATCTCATTTTCATCAGGTTT
                      ____________________________________________________________
consensus             AGAATCTGAAAAGCTCAAAAACTTGAACGCGTTTGATATCATCTCATTTTCATCAGGTTT
 
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rJMSF024E06+          TGACTTGTCCGGTTTGTTTGTGGAAGATGATGAAAAGGGAGAGGATAGATTCACATCCAG
rJMSF013A04+          TGACTTGTCCGGTTTGTTTGTGGAAGATGATGAAAAGGGAGAGGATAGATTCACATCCAG
                      ____________________________________________________________
consensus             TGACTTGTCCGGTTTGTTTGTGGAAGATGATGAAAAGGGAGAGGATAGATTCACATCCAG
 
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rJMSF024E06+          ACAACCGGCAAAAGCCATCATCTCCAAGCTAGAAGACATTGCTCAGCATCTAAAGTTGAA
rJMSF013A04+          ACAACCGGCAAAAGCCATCATCTCCAAGCTAGAAGACATTGCTCAGCATCTAAAGTTGAA
                      ____________________________________________________________
consensus             ACAACCGGCAAAAGCCATCATCTCCAAGCTAGAAGACATTGCTCAGCATCTAAAGTTGAA
 
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rJMSF024E06+          GATAATGAAGAAGAAAGGAGGATTCTTGAGATTCGAAGGATCAAGACTAGGAAGGCGAGG
rJMSF013A04+          GATAATGAAGAAGAAAGGAGGATTCTTGAGATTCGAAGGATCAAGACTAGGAAGGCGAGG
                      ____________________________________________________________
consensus             GATAATGAAGAAGAAAGGAGGATTCTTGAGATTCGAAGGATCAAGACTAGGAAGGCGAGG
 
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rJMSF024E06+          GGTTCTATCCATCGATGCAGAAATCTTTGAAATTACTCCCGCTTTCCATTTGGTGGAGTT
rJMSF013A04+          GGTTCTATCCATCGATGCAGAAATCTTTGAAATTACTCCCGCTTTCCATTTGGTGGAGTT
                      ____________________________________________________________
consensus             GGTTCTATCCATCGATGCAGAAATCTTTGAAATTACTCCCGCTTTCCATTTGGTGGAGTT
 
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rJMSF024E06+          GAAGAAGTCGAATGGAGATACACTAGAATATTGGAAAATGATGAAGCACGACATAAGGCC
rJMSF013A04+          GAAGAAGTCGAATGGAGATACACTAGAATATTGGAAAATGATGAAGCACGACATAAGGCC
                      ____________________________________________________________
consensus             GAAGAAGTCGAATGGAGATACACTAGAATATTGGAAAATGATGAAGCACGACATAAGGCC
 
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rJMSF024E06+          AGCGTTGCAAGACATCGTTTGGGCTTGGCAAGGTGATCAACCGCGACCTCAGCAGCTCGA
rJMSF013A04+          AGCGTTGCAAGACATCGTTTGGGCTTGGCAAGGTGATCAACCGCGACCTCAGCAGCTCGA
                      ____________________________________________________________
consensus             AGCGTTGCAAGACATCGTTTGGGCTTGGCAAGGTGATCAACCGCGACCTCAGCAGCTCGA
 
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rJMSF024E06+          AGAACAACCAGACCTACACTCCTCACAAGTAGCGCCACAGAGACTGGCTTAAACTCGGAA
rJMSF013A04+          AGAACAACCAGGCCTACACTCCTCACAAGTAGCGCCACAGAGACTGGCTTAAACTCGGAA
                      ____________________________________________________________
consensus             AGAACAACCAGGCCTACACTCCTCACAAGTAGCGCCACAGAGACTGGCTTAAACTCGGAA
 
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rJMSF024E06+          CTCATTACTAAGCTATTGATTTGATTGACTGCTATAATGCGGAGATTCGTGTATAATGCC
rJMSF013A04+          CTCATTACTAAGCTATTGATTTGATTGACTGCTATAATGCGGAGATTCGTGTATAATGCC
                      ____________________________________________________________
consensus             CTCATTACTAAGCTATTGATTTGATTGACTGCTATAATGCGGAGATTCGTGTATAATGCC
 
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rJMSF024E06+          AGCAATCCGTGTCCATTTATGACTGCTTAAAATT                          
rJMSF013A04+          AGCAATCCGTGTCCATTTATGACTGCTTAAAATTTATTTCTTGATGAATGATGCATTTAT
                      ____________________________________________________________
consensus             AGCAATCCGTGTCCATTTATGACTGCTTAAAATTTATTTCTTGATGAATGATGCATTTAT
 
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rJMSF013A04+          GTTCTTTTAGTCTGTCTTGGAATATTGTGATAATTGTAGGTTATTGGATTACCTTGTAAT
                      ____________________________________________________________
consensus             GTTCTTTTAGTCTGTCTTGGAATATTGTGATAATTGTAGGTTATTGGATTACCTTGTAAT