Contig 013912:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012K09Sequence528013912 (2)ref|XP_011079565.1|5e-58PREDICTED: universal stress protein A-like protein [Sesamum indicum]692013912 (2)ref|XP_011079565.1|4e-56PREDICTED: universal stress protein A-like protein [Sesamum indicum]

Alignment

This contig is upended


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JMSF012K09-                                       TGGAATCATCATCAACTACTATACTCATAATT
rJMSF012K09+                                      TGGAATCATCATCAACTACTATACTCATAATT
                      ____________________________________________________________
consensus                                         TGGAATCATCATCAACTACTATACTCATAATT
 
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JMSF012K09-           GAAAGAAAGATATTTTGGGGGGCGGGCATGGAAGCTATAGAGGATATGAGGAACAAAAGG
rJMSF012K09+          GAAAGAAAGATATTTTGGGGGGCGGGCATGGAAGCTATAGAGGATATGAGGAACAAAAGG
                      ____________________________________________________________
consensus             GAAAGAAAGATATTTTGGGGGGCGGGCATGGAAGCTATAGAGGATATGAGGAACAAAAGG
 
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JMSF012K09-           GTAGTGGTGGCAGTTGACGAAGGAGAAGAGAGTATGGAGGCGCTGTCGTGGTGTCTCACC
rJMSF012K09+          GTAGTGGTGGCAGTTGACGAAGGAGAAGAGAGTATGGAGGCGCTGTCGTGGTGTCTCACC
                      ____________________________________________________________
consensus             GTAGTGGTGGCAGTTGACGAAGGAGAAGAGAGTATGGAGGCGCTGTCGTGGTGTCTCACC
 
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JMSF012K09-           AACCTCCTTACCCAATTTACTTGCGCCACCAGCCTTCTTCTCCTCTATGTCAAACCCCCG
rJMSF012K09+          AACCTCCTTACCCAATTTACTTGCGCCACCAGCCTTCTTCTCCTCTATGTCAAACCCCCG
                      ____________________________________________________________
consensus             AACCTCCTTACCCAATTTACTTGCGCCACCAGCCTTCTTCTCCTCTATGTCAAACCCCCG
 
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JMSF012K09-           CCGCCTGTCTACTCTACACTAGATCCTACAGGATACTTTTTTGCTGGGGATGATGCCATT
rJMSF012K09+          CCGCCTGTCTACTCTACACTAGATCCTACAGGATACTTTTTTGCTGGGGATGATGCCATT
                      ____________________________________________________________
consensus             CCGCCTGTCTACTCTACACTAGATCCTACAGGATACTTTTTTGCTGGGGATGATGCCATT
 
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JMSF012K09-           GCAGACATGAAGAAATACGGAAGTGAGCTGGCAAACTCAGTCATGAACAAAGCAGAATCA
rJMSF012K09+          GCAGACATGAAGAAATACGGAAGTGAGCTGGCAAACTCAGTCATGAACAAAGCAGAATCA
                      ____________________________________________________________
consensus             GCAGACATGAAGAAATACGGAAGTGAGCTGGCAAACTCAGTCATGAACAAAGCAGAATCA
 
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JMSF012K09-           ATCTGCAGAAAATTCAATACCAGT                                    
rJMSF012K09+          ATCTGCAGAAAATTCAATACCAGTATAAAAGTGGAAAAGAAAGTAGGGTGTGGAGAAGCA
                      ____________________________________________________________
consensus             ATCTGCAGAAAATTCAATACCAGTATAAAAGTGGAAAAGAAAGTAGGGTGTGGAGAAGCA
 
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rJMSF012K09+          AAGGATGTGATATGCGCAGCAGTGGAGAATCTTAAAGCAGACATCCTGGTGATGGGAAAC
                      ____________________________________________________________
consensus             AAGGATGTGATATGCGCAGCAGTGGAGAATCTTAAAGCAGACATCCTGGTGATGGGAAAC
 
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rJMSF012K09+          CACGACTATGGCTTCTTCAAAAGGGCTTTGGTGGGAAGTGTGAGTGAATACTGTGCCAAG
                      ____________________________________________________________
consensus             CACGACTATGGCTTCTTCAAAAGGGCTTTGGTGGGAAGTGTGAGTGAATACTGTGCCAAG
 
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rJMSF012K09+          CATGTCAAGTGTCCAGTGGTGGTTGTCAAGACCCCAAAGACGATCATCTCATCAAGATAA
                      ____________________________________________________________
consensus             CATGTCAAGTGTCCAGTGGTGGTTGTCAAGACCCCAAAGACGATCATCTCATCAAGATAA
 
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rJMSF012K09+          CGCCGCCGCAGATGACTCATCAGCCAATTAACATATATCATCACGCCGTACTGTACTATA
                      ____________________________________________________________
consensus             CGCCGCCGCAGATGACTCATCAGCCAATTAACATATATCATCACGCCGTACTGTACTATA
 
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rJMSF012K09+          CGTAGTGTGTGTTAAATTACTTAGTTCACACTTCATTTATATACATACAGTACCACGCAC
                      ____________________________________________________________
consensus             CGTAGTGTGTGTTAAATTACTTAGTTCACACTTCATTTATATACATACAGTACCACGCAC