Contig 013910:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF014I08+                                                     AGCGATGTCAGGAAAGA
                      ____________________________________________________________
consensus                                                        AGCGATGTCAGGAAAGA
 
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rJMSF014I08+          GCAAACACGGAGAGTGATCCTGGATTGAAACACAAACTACTCAGGCTTGGAAGGAAGCTG
                      ____________________________________________________________
consensus             GCAAACACGGAGAGTGATCCTGGATTGAAACACAAACTACTCAGGCTTGGAAGGAAGCTG
 
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rJMSF014I08+          AAAGAGATTGACGATGATGTTCAAAGGCATAATGAACTTCTTGAGGTCATCAGGAGTTCA
                      ____________________________________________________________
consensus             AAAGAGATTGACGATGATGTTCAAAGGCATAATGAACTTCTTGAGGTCATCAGGAGTTCA
 
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rJMSF014I08+          CCTTCTGAAATCAACGAGATTGTTACTCGACGTCGTAAAGATTTTACTAAAGAGTTCTTC
                      ____________________________________________________________
consensus             CCTTCTGAAATCAACGAGATTGTTACTCGACGTCGTAAAGATTTTACTAAAGAGTTCTTC
 
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rJMSF014I08+          TTTCATGTTAACACTGTGGCGGAATCTTATTATGACAATCCAGATGAACAAAATGCGGTG
                      ____________________________________________________________
consensus             TTTCATGTTAACACTGTGGCGGAATCTTATTATGACAATCCAGATGAACAAAATGCGGTG
 
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rJMSF014I08+          GCAAGGATTGGTAATGAGCGCTTGGAAGCTGTAGAAGCCTACGATACTGCAACTGAAAGT
                      ____________________________________________________________
consensus             GCAAGGATTGGTAATGAGCGCTTGGAAGCTGTAGAAGCCTACGATACTGCAACTGAAAGT
 
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rJMSF014I08+          ATAGAGGCATTGAATGCAGCCGAGCTGAAACTGCAAGATATAGTCAATTCGCCTTCTTTG
                      ____________________________________________________________
consensus             ATAGAGGCATTGAATGCAGCCGAGCTGAAACTGCAAGATATAGTCAATTCGCCTTCTTTG
 
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rJMSF014I08+          GATGCTGCTTGCAGGAAAATAGATGACCTAGCCCAGAAGAATCAATTTGACTCAGCATTG
                      ____________________________________________________________
consensus             GATGCTGCTTGCAGGAAAATAGATGACCTAGCCCAGAAGAATCAATTTGACTCAGCATTG
 
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rJMSF014I08+          GCCCTCTTGATTACAAAAGCTTGGTCAGCAGCAAAGGAGTCTGACATGACACAGACTGAG
                      ____________________________________________________________
consensus             GCCCTCTTGATTACAAAAGCTTGGTCAGCAGCAAAGGAGTCTGACATGACACAGACTGAG
 
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rJMSF014I08+          GACTCCGGAGCAGCTGCACAACTGGATTGGGATTATAGCTGATGCATATCACTTCAGCAG
rJMSF012G03+          GACTCCGGAGCAGCTGCACAACTGGATTGGGATTATAGCTGATGCATATCACTTCAGCAG
rJMSF012B20+          GACTCCGGAGCAGCTGCACAACTGGATTGGGATTATAGCTGATGCATATCACTTCAGCAG
                      ____________________________________________________________
consensus             GACTCCGGAGCAGCTGCACAACTGGATTGGGATTATAGCTGATGCATATCACTTCAGCAG
 
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rJMSF014I08+          AGAAGGTACTCTCATTAGACAAGCTAGAGATTTAATGAACCCCAAAACAATCCAAAAACT
rJMSF012G03+          AGAAGGTACTCTCATTAGACAAGCTAGAGATTTAATGAACCCCAAAACAATCCAAAAACT
rJMSF012B20+          AGAAGGTACTCTCATTAGACAAGCTAGAGATTTAATGAACCCCAAAACAATCCAAAAACT
                      ____________________________________________________________
consensus             AGAAGGTACTCTCATTAGACAAGCTAGAGATTTAATGAACCCCAAAACAATCCAAAAACT
 
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rJMSF014I08+          GGAAGAGTTGAAGAAGTTGATTCAGGACAAGTTCATGTAAGAGAGAATTTTGTTTGGGAC
rJMSF012G03+          GGAAGAGTTGAAGAAGTTGATTCAGGACAAGTTCATGTAAGAGAGAATTTTGTTTGGGAC
rJMSF012B20+          GGAAGAGTTGAAGAAGTTGATTCAGGACAAGTTCATGTAAGAGAGAATTTTGTTTGGGAC
                      ____________________________________________________________
consensus             GGAAGAGTTGAAGAAGTTGATTCAGGACAAGTTCATGTAAGAGAGAATTTTGTTTGGGAC
 
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rJMSF014I08+          AGATAAATTATGCACTTCAGAAGTCTTTTAGTGATTTGTTGAATTGTGGTGCTGGAAGCC
rJMSF012G03+          AGATAAATTATGCACTTCAGAAGTCTTTTAGTGATTTGTTGAATTGTGGTGCTGGAAGCC
rJMSF012B20+          AGATAAATTATGCACTTCAGAAGTCTTTTAGTGATTTGTTGAATTGTGGTGCTGGAAGCC
                      ____________________________________________________________
consensus             AGATAAATTATGCACTTCAGAAGTCTTTTAGTGATTTGTTGAATTGTGGTGCTGGAAGCC
 
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rJMSF014I08+          CAAAAGCACAAGTCTTGAAGCTCCACAAT                               
rJMSF012G03+          CAAAAGCACAAGTCTTGAAGCTCCACAATTATTGACTGCAATTTATCAAGCTTGGTAGGT
rJMSF012B20+          CAAAAGCACAAGTCTTGAAGCTCCACAATTATTGACTGCAATTTATCAAGCTTGGTAGGT
                      ____________________________________________________________
consensus             CAAAAGCACAAGTCTTGAAGCTCCACAATTATTGACTGCAATTTATCAAGCTTGGTAGGT
 
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rJMSF012G03+          CCATCAAAAAGAAAGAAAAAGGTAATTTCCAGCCCCCAGAACCATTTGACTCAAATCTTG
rJMSF012B20+          CCATCAAAAAGAAAGAAAAAGGTAATTTCCAGCCCCCAGAACCATTTGACTCAAATCTTG
                      ____________________________________________________________
consensus             CCATCAAAAAGAAAGAAAAAGGTAATTTCCAGCCCCCAGAACCATTTGACTCAAATCTTG
 
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rJMSF012G03+          ATAGTTGATATAATTTTTTAATATCATATATATAATACAGGAATCAAATGTGGAAACGTA
rJMSF012B20+          ATAGTTGATATAATTTTTTAATATCATATATATAATACAGGAATCAAATGTGGAAACGTA
                      ____________________________________________________________
consensus             ATAGTTGATATAATTTTTTAATATCATATATATAATACAGGAATCAAATGTGGAAACGTA
 
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rJMSF012G03+          GGATCATAGTTATTAAGTTATTTTAATTTCATGTAGCTAGCCTAGTTGTTTGGAGCTGTA
rJMSF012B20+          GGATCATAGTTATTAAGTTATTTTAATTTCATGTAGCTAGCCTAGTTGTTTGGAGCTGTA
                      ____________________________________________________________
consensus             GGATCATAGTTATTAAGTTATTTTAATTTCATGTAGCTAGCCTAGTTGTTTGGAGCTGTA
 
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rJMSF012G03+          AGAAAAGCTATGTATAGCAGTCTTCTGTTTTGTTGTAGTGAACCTGCAGAATT       
rJMSF012B20+          AGAAAAGCTATGTATAGCAGTCTTCTGTTTTGTTGTAGTGAACCTGCAGAATTGGTGATT
                      ____________________________________________________________
consensus             AGAAAAGCTATGTATAGCAGTCTTCTGTTTTGTTGTAGTGAACCTGCAGAATTGGTGATT