Contig 013900:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036L08Sequence577008835 (5)ref|XP_011086928.1|6e-55PREDICTED: uncharacterized protein LOC105168518 isoform X1 [Sesamum indicum]752013900 (2)ref|XP_009765702.1|2e-93PREDICTED: uncharacterized protein LOC104217215 isoform X1 [Nicotiana sylvestri
JMSF009I13Sequence438008835 (5)gb|EYU17811.1|6e-39hypothetical protein MIMGU_mgv1a001259mg [Erythranthe guttata]785013900 (2)ref|XP_009765702.1|2e-94PREDICTED: uncharacterized protein LOC104217215 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF009I13+                                                                 ATTAC
                      ____________________________________________________________
consensus                                                                    ATTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          ACATAATGCAGCAGAAACGTACTCCAAGTTGATTGAGGAGATGAGGGGATCGACCATAAT
rJMSF009I13+          ACATAATGCAGCAGAAACGTACTCCAAGTTGATTGAGGAGATGAGGGGATCGACCATAAT
                      ____________________________________________________________
consensus             ACATAATGCAGCAGAAACGTACTCCAAGTTGATTGAGGAGATGAGGGGATCGACCATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          GCAGAAGATAAATGCCCTGATATGTATGTTGAGTGACCAGATAAATCATCGTAGGGAAGA
rJMSF009I13+          GCAGAAGATAAATGCCCTGATATGTATGTTGAGTGACCAGATAAATCATCGTAGGGAAGA
                      ____________________________________________________________
consensus             GCAGAAGATAAATGCCCTGATATGTATGTTGAGTGACCAGATAAATCATCGTAGGGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          GTCTAGCAATTGCTTTACCAAACTTGCTCCATCAAAAGAGAAACAGCTACGAGAAAAAGC
rJMSF009I13+          GTCTAGCAATTGCTTTACCAAACTTGCTCCATCAAAAGAGAAACAGCTACGAGAAAAAGC
                      ____________________________________________________________
consensus             GTCTAGCAATTGCTTTACCAAACTTGCTCCATCAAAAGAGAAACAGCTACGAGAAAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          TATTAAAGCACAAAGCTTGAAAGTTTTGTTCTCGTCTGAAGTCATTTTTGAAGTTCATGA
rJMSF009I13+          TATTAAAGCACAAAGCTTGAAAGTTTTGTTCTCGTCTGAAGTCATTTTTGAAGTTCATGA
                      ____________________________________________________________
consensus             TATTAAAGCACAAAGCTTGAAAGTTTTGTTCTCGTCTGAAGTCATTTTTGAAGTTCATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          TGACTTGACACATGTTGTGAACATTGAAAATCAGGATTGTACATGCCTGGAGTGGAAATT
rJMSF009I13+          TGACTTGACACATGTTGTGAACATTGAAAATCAGGATTGTACATGCCTGGAGTGGAAATT
                      ____________________________________________________________
consensus             TGACTTGACACATGTTGTGAACATTGAAAATCAGGATTGTACATGCCTGGAGTGGAAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          GAGTGGGCTGCCTTGTTGCCATGCTGTTGCTGTTTTCCTCTCATCTTCCAAGAGTGTGTA
rJMSF009I13+          GAGTGGGCTGCCTTGTTGCCATGCTGTTGCTGTTTTCCTCTCATCTTCCAAGAGTGTGTA
                      ____________________________________________________________
consensus             GAGTGGGCTGCCTTGTTGCCATGCTGTTGCTGTTTTCCTCTCATCTTCCAAGAGTGTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          TGACTACTGTCCACAATGGTTCACTGTTGAAAGTTTTCGTTCTGCATATTCTGAGCCCAT
rJMSF009I13+          TGACTACTGTCCACAATGGTTCACTGTTGAAAGTTTTCGTTCTGCATATTCTGAGCCCAT
                      ____________________________________________________________
consensus             TGACTACTGTCCACAATGGTTCACTGTTGAAAGTTTTCGTTCTGCATATTCTGAGCCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          TAATCCTATTCCTGGTATTGGGAAGCCTGTCGAGGACGAAGTGGATTCTGAAAGTGCAGA
rJMSF009I13+          TAATCCTATTCCTGGTATTGGGAAGCCTGTCGAGGACGAAGTGGATTCTGAAAGTGCAGA
                      ____________________________________________________________
consensus             TAATCCTATTCCTGGTATTGGGAAGCCTGTCGAGGACGAAGTGGATTCTGAAAGTGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          TGTGCTCCCTCCTTCTCCTTCTCCTTCTCGGTTTCCAGTTCAAGAAAAGGAAGAAGAGAC
rJMSF009I13+          TGTGCTCCCTCCTTCTCCTTCTCCTTCTCGGTTTCCAGTTCAAGAAAAGGAAGAAGAGAC
                      ____________________________________________________________
consensus             TGTGCTCCCTCCTTCTCCTTCTCCTTCTCGGTTTCCAGTTCAAGAAAAGGAAGAAGAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          CAAGACAATAGACCCAAATAAGAGGACGGTTATGTGCAGCAAGTGCAAGGAACCAGGACA
rJMSF009I13+          CAAGACAATAGACCCAAATAAGAGGACGGTTATGTGCAGCAAGTGCAAGGAACCAGGACA
                      ____________________________________________________________
consensus             CAAGACAATAGACCCAAATAAGAGGACGGTTATGTGCAGCAAGTGCAAGGAACCAGGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          TAATAAGGCTTCATGCAAGGTGAGTTTATAGTTCATAGCCATACTAGTAGTTCGTGCATC
rJMSF009I13+          TAATAAGGCTTCATGCAAGGTGAGTTTATAGTTCATAGCCATACTAGTAGTTCGTGCATC
                      ____________________________________________________________
consensus             TAATAAGGCTTCATGCAAGGTGAGTTTATAGTTCATAGCCATACTAGTAGTTCGTGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          ATGTACAGCTTTCATAGTTTATAGTGTTAGCTTGCTTGTGCTGTTATTGATAGTTATGAT
rJMSF009I13+          ATGTACAGCTTTCATAGTTTATAGTGTTAGCTTGCTTGTGCTGTTATTGATAGTTATGAT
                      ____________________________________________________________
consensus             ATGTACAGCTTTCATAGTTTATAGTGTTAGCTTGCTTGTGCTGTTATTGATAGTTATGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF036L08+          GAGGAAATAACTTAGATTGCCTTTGCAAAA                              
rJMSF009I13+          GAGGAAATAACTTAGATTGCCTTTGCAAAAAGCAGTAATTCTCCCTGTGTAATGTAATCG
                      ____________________________________________________________
consensus             GAGGAAATAACTTAGATTGCCTTTGCAAAAAGCAGTAATTCTCCCTGTGTAATGTAATCG