Contig 013893:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF049E04+                    AACACATTCCGTTTGGTGCTTCACCACAGGATATATGGACTGAATTAGGC
                      ____________________________________________________________
consensus                       AACACATTCCGTTTGGTGCTTCACCACAGGATATATGGACTGAATTAGGC
 
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rJMSF049E04+          CGACCCTGTGGAATTCACCAAAAACAGGTTGATCAAATGGTGATTCATTCGGCTTCAGAT
rJMSF008I11+                            CAAAAACANGTTGATCAAATGGTGATTCATTCGGCTTCAGAT
                      ____________________________________________________________
consensus             CGACCCTGTGGAATTCACCAAAAACAGGTTGATCAAATGGTGATTCATTCGGCTTCAGAT
 
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rJMSF049E04+          CCCCGGCCTCGGACTACCCTCTGTGGAGATTATTTTTATAATTACTTTACACGTGGATTA
rJMSF008I11+          CCCCGGCCTCGGACTACCCTCTGTGGAGATTATTTTTATAATTACTTTACACGTGGATTA
                      ____________________________________________________________
consensus             CCCCGGCCTCGGACTACCCTCTGTGGAGATTATTTTTATAATTACTTTACACGTGGATTA
 
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rJMSF049E04+          GACATTTTATTCGATGGGCAGACTCATAAAATAAAGAAGTTTGTCTTGCACTCCAACTAT
rJMSF008I11+          GACATTTTATTCGATGGGCAGACTCATAAAATAAAGAAGTTTGTCTTGCACTCCAACTAT
                      ____________________________________________________________
consensus             GACATTTTATTCGATGGGCAGACTCATAAAATAAAGAAGTTTGTCTTGCACTCCAACTAT
 
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rJMSF049E04+          CCCGGGCATGCAGATTTTAATTCTTACATGAAGTGCAACTTTGTTATCCACACTTCTGAT
rJMSF008I11+          CCCGGGCATGCAGATTTTAATTCTTACATGAAGTGCAACTTTGTTATCCACACTTCTGAT
                      ____________________________________________________________
consensus             CCCGGGCATGCAGATTTTAATTCTTACATGAAGTGCAACTTTGTTATCCACACTTCTGAT
 
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rJMSF049E04+          TTTGGGGATTCGTTTGATCATGAAGTGAACTCTAAGAACTCTATTACACCCAGCACAAAG
rJMSF008I11+          TTTGGGGATTCGTTTGATCATGAAGTGAACTCTAAGAACTCTATTACACCCAGCACAAAG
                      ____________________________________________________________
consensus             TTTGGGGATTCGTTTGATCATGAAGTGAACTCTAAGAACTCTATTACACCCAGCACAAAG
 
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rJMSF049E04+          TGGGAACAAGTTAAGGAAATACTCGGGGACTCTGGTCAAGCGGCTATTCAAACACAAGGC
rJMSF008I11+          TGGGAACAAGTTAAGGAAATACTCGGGGACTCTGGTCAAGCGGCTATTCAAACACAAGGC
                      ____________________________________________________________
consensus             TGGGAACAAGTTAAGGAAATACTCGGGGACTCTGGTCAAGCGGCTATTCAAACACAAGGC
 
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rJMSF049E04+          TCCACGAGCAACCCATTCGGGTCTACTTTTGTGTATGGTTATCCAAATGTTGCGTTTGAG
rJMSF008I11+          TCCACGAGCAACCCATTCGGGTCTACTTTTGTGTATGGTTATCCAAATGTTGCGTTTGAG
                      ____________________________________________________________
consensus             TCCACGAGCAACCCATTCGGGTCTACTTTTGTGTATGGTTATCCAAATGTTGCGTTTGAG
 
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rJMSF049E04+          GTGATGAAGAATGGCCACATTGCTACCGTAACGCTCTTTCAGTCATGATTTATAATGGCT
rJMSF008I11+          GTGATGAAGAATGGCCACATTGCTACCGTAACGCTCTTTCAGTCATGATTTATAATGGCT
                      ____________________________________________________________
consensus             GTGATGAAGAATGGCCACATTGCTACCGTAACGCTCTTTCAGTCATGATTTATAATGGCT
 
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rJMSF049E04+          TCGGGTTGGAATCGTAAATCATGATTTCCAGAAGAAAGCATGCCCGGTGTCCTGGTTGCA
rJMSF008I11+          TCGGGTTGGAATCGTAAATCATGATTTCCAGAAGAAAGCATGCCCGGTGTCCTGGTTGCA
                      ____________________________________________________________
consensus             TCGGGTTGGAATCGTAAATCATGATTTCCAGAAGAAAGCATGCCCGGTGTCCTGGTTGCA
 
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rJMSF049E04+          ATCGCGGTGGAAGTGTCTGTGTCTCTATATATACTATATATACAGCTTTCTTCTATTGTA
rJMSF008I11+          ATCGCGGTGGAAGTGTCTGTGTCTCTATATATACTATATATACAGCTTTCTTCTATTGTA
                      ____________________________________________________________
consensus             ATCGCGGTGGAAGTGTCTGTGTCTCTATATATACTATATATACAGCTTTCTTCTATTGTA
 
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rJMSF049E04+          TAGTTAATGCCAAGATCATAGCACCTAACTGGGGAAATTGTGTATTTGATTAAATCTGTA
rJMSF008I11+          TAGTTAATGCCAAGATCATAGCACCTAACTGGGGAAATTGTGTATTTGATTAAATCTGTA
                      ____________________________________________________________
consensus             TAGTTAATGCCAAGATCATAGCACCTAACTGGGGAAATTGTGTATTTGATTAAATCTGTA
 
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rJMSF049E04+          CATATGTGGAATGACACATTGGTTGTAGTTGTATGGTCTCCAAGCTGTTGTGATT     
rJMSF008I11+          CATATGTGGAATGACACATTGGTTGTAGTTGTATGGTCTCCAAGCTGTTGTGATTTAACT
                      ____________________________________________________________
consensus             CATATGTGGAATGACACATTGGTTGTAGTTGTATGGTCTCCAAGCTGTTGTGATTTAACT
 
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rJMSF008I11+          GACCCAAGTTTGTGTATTACAATGAAGAATCGATCAGTGTGGAGAACCGGAGATGTGGCT
                      ____________________________________________________________
consensus             GACCCAAGTTTGTGTATTACAATGAAGAATCGATCAGTGTGGAGAACCGGAGATGTGGCT