Contig 013892:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008H01+                                   TCTCCGNACAGCGCGGCGTCGTCCTTCAAGATGGA
                      ____________________________________________________________
consensus                                      TCTCCGNACAGCGCGGCGTCGTCCTTCAAGATGGA
 
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rJMSF008H01+          CTTCTCGATCTTCAGAAACGGGCTGTTGGGGAAGAGAGATAGCACCGGCGACGGCGATAG
                      ____________________________________________________________
consensus             CTTCTCGATCTTCAGAAACGGGCTGTTGGGGAAGAGAGATAGCACCGGCGACGGCGATAG
 
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rJMSF008H01+          AGAGAGAGGCGGCTCTTCCAATTCCCGAGCCTCCGACGACGACGAGAACGGCCTCGGCCG
                      ____________________________________________________________
consensus             AGAGAGAGGCGGCTCTTCCAATTCCCGAGCCTCCGACGACGACGAGAACGGCCTCGGCCG
 
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rJMSF008D19+                                                      AAAGCTTCAAAGAACA
JMSF008D19-                                                       AAAGCTTCAAAGAACA
rJMSF008H01+          GAAAAAGCTCCGCCTCACCAAAGATCAGTCAGCTTTTCTCGAGGAAAGCTTCAAAGAACA
                      ____________________________________________________________
consensus             GAAAAAGCTCCGCCTCACCAAAGATCAGTCAGCTTTTCTCGAGGAAAGCTTCAAAGAACA
 
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rJMSF008D19+          CAACACTCTCAACCCCAAACAAAAACTCGCTTTAGCAAAACAACTCAATCTTCGTCCTCG
JMSF008D19-           CAACACTCTCAACCCCAAACAAAAACTCGCTTTAGCAAAACAACTCAATCTTCGTCCTCG
rJMSF008H01+          CAACACTCTCAACCCCAAACAAAAACTCGCTTTAGCAAAACAACTCAATCTTCGTCCTCG
                      ____________________________________________________________
consensus             CAACACTCTCAACCCCAAACAAAAACTCGCTTTAGCAAAACAACTCAATCTTCGTCCTCG
 
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rJMSF008D19+          CCAAGTCGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGT
JMSF008D19-           CCAAGTCGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGT
rJMSF008H01+          CCAAGTCGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGT
                      ____________________________________________________________
consensus             CCAAGTCGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGT
 
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rJMSF008D19+          GGATTGCGAGTATTTAAAGCGGTGTTGCGAGACGCTGACAGAAGAGAACCGAAGATTACA
JMSF008D19-           GGATTGCGAGTATTTAAAGCGGTGTTGCGAGACGCTGACAGAAGAGAACCGAAGATTACA
rJMSF008H01+          GGATTGCGAGTATTTAAAGCGGTGTTGCGAGACGCTGACAGAAGAGAACCGAAGATTACA
                      ____________________________________________________________
consensus             GGATTGCGAGTATTTAAAGCGGTGTTGCGAGACGCTGACAGAAGAGAACCGAAGATTACA
 
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rJMSF008D19+          GAAAGAGCTTCAAGAATTGAGGGCTTTGAAGGCGTCTCAGCCCTTCTACATGCAGCTTCC
JMSF008D19-           GAAAGAGCTTCAAGAATTGAGGGCTTTGAAGGCGTCTCAGCCCTTCTACATGCAGCTTCC
rJMSF008H01+          GAAAGAGCTTCAAGAATTGAGGGCTTTGAAGGCGTCTCAGCCCTTCTACATGCAGCTTCC
                      ____________________________________________________________
consensus             GAAAGAGCTTCAAGAATTGAGGGCTTTGAAGGCGTCTCAGCCCTTCTACATGCAGCTTCC
 
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rJMSF008D19+          GGCCACCACTCTCACCATGTGTCCGTCGTGCGAGCGCGTTGCCTCTTCCACCGCCGCCGC
JMSF008D19-           GGCCACCACTCTCACCATGTGTCCGTCGTGCGAGCGCGTTGCCTCTTCCACCGCCGCCGC
rJMSF008H01+          GGCCACCACTCTCACCATGTGTCCGTCGTGCGAGCGCGTTGCCTCTTCCACCGCCGCCGC
                      ____________________________________________________________
consensus             GGCCACCACTCTCACCATGTGTCCGTCGTGCGAGCGCGTTGCCTCTTCCACCGCCGCCGC
 
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rJMSF008D19+          TACCCCGACTACTGCCGCCGCCGCCCACGGCGGCGCTAAGCCCAAACTCTTCCCGTTTCC
JMSF008D19-           TACCCCGACTACTGGCGCCGCCGCCCACGGCGG                           
rJMSF008H01+          TACCCCGACTACTGCCGCCGCCGCCCACGGCGGCGCTAAGCCCAAACTCTTCCCGTTTCC
                      ____________________________________________________________
consensus             TACCCCGACTACTGCCGCCGCCGCCCACGGCGGCGCTAAGCCCAAACTCTTCCCGTTTCC
 
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rJMSF008D19+          GCCCCCGCAAGTGCATGCTCCCCAGGCTGCTTCGTGATTACTTTTTTGTGTTAATTAGGG
rJMSF008H01+          GCCCCCGCAAGTGCATGCTCCCCAGGCTGCTTCGTGATTACTTTTTTGTGTTAATTAGGC
                      ____________________________________________________________
consensus             GCCCCCGCAAGTGCATGCTCCCCAGGCTGCTTCGTGATTACTTTTTTGTGTTAATTAGGG
 
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rJMSF008D19+          TAATGACTGTTAGTATACGGTGTAGTCTTCTGCTTCTATATGTACATATCA         
rJMSF008H01+          TAATGACTGTTAGTATACGGTGTAGTCTTCTGCTTCTATATGTACATATCAACATTTTGA
                      ____________________________________________________________
consensus             TAATGACTGTTAGTATACGGTGTAGTCTTCTGCTTCTATATGTACATATCAACATTTTGA
 
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rJMSF008H01+          TTCTCCATTTTACTTGTCTTAATCCCAGACCATAGTTTTCGGGAACTTTTACCATATATC
                      ____________________________________________________________
consensus             TTCTCCATTTTACTTGTCTTAATCCCAGACCATAGTTTTCGGGAACTTTTACCATATATC