Contig 013890:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007P03Sequence292013890 (2)ref|XP_006367827.1|9e-33PREDICTED: melanoma-associated antigen G1-like [Solanum tuberosum]755013890 (2)ref|XP_009779647.1|3e-94PREDICTED: melanoma-associated antigen 2 isoform X1 [Nicotiana sylvestris] ref|

Alignment

This contig is upended


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JMSF007P03-                                   GGTCATCCATTGCAGAAGAAAAGGGAGCTCCAATGC
                      ____________________________________________________________
consensus                                     GGTCATCCATTGCAGAAGAAAAGGGAGCTCCAATGC
 
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JMSF007P03-           AGAGTTGAAAACAAGCCAACTACTTTGAAGTTTGAAGCTAAATTATCAGTCGAAGATGTC
                      ____________________________________________________________
consensus             AGAGTTGAAAACAAGCCAACTACTTTGAAGTTTGAAGCTAAATTATCAGTCGAAGATGTC
 
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JMSF007P03-           TGGTTCCTTCGAGGAGTTCGCTCAATTCGACATCTCCGTCGAGGAAAAGGACAAGCTCGT
                      ____________________________________________________________
consensus             TGGTTCCTTCGAGGAGTTCGCTCAATTCGACATCTCCGTCGAGGAAAAGGACAAGCTCGT
 
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JMSF007P03-           CGGAGAAGTAATACGCTACGTGTTGTTCAAGACTGAGCAGAGCTCGGGCTGTCCGATAAA
                      ____________________________________________________________
consensus             CGGAGAAGTAATACGCTACGTGTTGTTCAAGACTGAGCAGAGCTCGGGCTGTCCGATAAA
 
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JMSF007P03-           GAGGGAGGATTTGACTCAGTTGATCACCGGCAAAAACTACCGGCAGAGGAATCTCCCTGC
rJMSF007P03+                                   ACCGGCAAAAACTACCGGCAGAGGAATCTCCCTGC
                      ____________________________________________________________
consensus             GAGGGAGGATTTGACTCAGTTGATCACCGGCAAAAACTACCGGCAGAGGAATCTCCCTGC
 
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JMSF007P03-           TTTTGTTATCAATGAG                                            
rJMSF007P03+          TTTTGTTATCAATGAGGCTAGGAAGAAGCTCGAGGAAATCTTCGGTTACGAAATGAAGGA
                      ____________________________________________________________
consensus             TTTTGTTATCAATGAGGCTAGGAAGAAGCTCGAGGAAATCTTCGGTTACGAAATGAAGGA
 
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rJMSF007P03+          GCTTCAGCGCGCCCGTTTGTCCACCACCAATCGCTTCTCGCAGCAAGCCACTGCTGATGC
                      ____________________________________________________________
consensus             GCTTCAGCGCGCCCGTTTGTCCACCACCAATCGCTTCTCGCAGCAAGCCACTGCTGATGC
 
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rJMSF007P03+          AAAATCATATATTCTCATCAGTAAGTTACCTCCAAAAGCCTACAAGGAGTGTGTGGAGGA
                      ____________________________________________________________
consensus             AAAATCATATATTCTCATCAGTAAGTTACCTCCAAAAGCCTACAAGGAGTGTGTGGAGGA
 
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rJMSF007P03+          TAAGAGCAAATCACATGTTACTGGTTTCACATTTGTGGTCATGAGTGTTATTTATCTTGC
                      ____________________________________________________________
consensus             TAAGAGCAAATCACATGTTACTGGTTTCACATTTGTGGTCATGAGTGTTATTTATCTTGC
 
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rJMSF007P03+          CGGAGGCAATATAACAGAGGAAGATCTTTGGCGTCATTTGAGACGGTTGGGTCTGATGCA
                      ____________________________________________________________
consensus             CGGAGGCAATATAACAGAGGAAGATCTTTGGCGTCATTTGAGACGGTTGGGTCTGATGCA
 
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rJMSF007P03+          AACTGATGAAAGCCATCCTGTCCTTGGTAACCTCAAACTGGCATTGGAGGCGCTTGTTCA
                      ____________________________________________________________
consensus             AACTGATGAAAGCCATCCTGTCCTTGGTAACCTCAAACTGGCATTGGAGGCGCTTGTTCA
 
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rJMSF007P03+          GCAAAGATATGTGCATAAAGAGAAAGTCAGTGGTCCTGAAGGAAATGTTATACATTATGA
                      ____________________________________________________________
consensus             GCAAAGATATGTGCATAAAGAGAAAGTCAGTGGTCCTGAAGGAAATGTTATACATTATGA
 
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rJMSF007P03+          GCTTGCTGAGAGAGCTCTAGATGAGGATATTAATAATAGAATGAAAGAGTATATATCCAA
                      ____________________________________________________________
consensus             GCTTGCTGAGAGAGCTCTAGATGAGGATATTAATAATAGAATGAAAGAGTATATATCCAA
 
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rJMSF007P03+          GATTGTGCAAAAGGATATTAACACAGTGGATGTTGATTAGCTATTTCTGCTGGCTGGAAC
                      ____________________________________________________________
consensus             GATTGTGCAAAAGGATATTAACACAGTGGATGTTGATTAGCTATTTCTGCTGGCTGGAAC
 
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rJMSF007P03+          GTGCGTTTGGAAATTACTAGTGTTTTTGATAAGTGATCTAGGAAGAATGTAGCACAGTGG
                      ____________________________________________________________
consensus             GTGCGTTTGGAAATTACTAGTGTTTTTGATAAGTGATCTAGGAAGAATGTAGCACAGTGG
 
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rJMSF007P03+          ATGTATTTTTGTGTTTCTATTACTCTTCGAGGAAAGGATGTCCTGTGCGGTGCCATTTTG
                      ____________________________________________________________
consensus             ATGTATTTTTGTGTTTCTATTACTCTTCGAGGAAAGGATGTCCTGTGCGGTGCCATTTTG
 
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rJMSF007P03+          TTTCCTCTTTTGCTGTAAATTTCTACTGTGTTGCCAAAGTGTTTAGTTTTGTGAAATTCC
                      ____________________________________________________________
consensus             TTTCCTCTTTTGCTGTAAATTTCTACTGTGTTGCCAAAGTGTTTAGTTTTGTGAAATTCC