Contig 013884:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003B12Sequence723013884 (4)ref|XP_009631990.1|90.1PREDICTED: uncharacterized protein LOC104121649 [Nicotiana tomentosiformis]
JMSF007G09Sequence467013386 (8)794013884 (4)ref|XP_009631990.1|125PREDICTED: uncharacterized protein LOC104121649 [Nicotiana tomentosiformis]
JMSF013C19Sequence464013386 (8)786013884 (4)ref|XP_009631990.1|120PREDICTED: uncharacterized protein LOC104121649 [Nicotiana tomentosiformis]
JMSF026I14Sequence654013386 (8)769013884 (4)ref|XP_009631990.1|128PREDICTED: uncharacterized protein LOC104121649 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+                                                      CCAGTCAGGTTTAAGA
rJMSF013C19+                                                               TTTAAGA
rJMSF007G09+                                                               TTTAAGA
                      ____________________________________________________________
consensus                                                         CCAGTCAGGTTTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          CGTAGTAATAGAGCAACAAGAAACCGTATCAACTATAAACAGTACGAGCTGTCAGATTCT
rJMSF003B12+                                                    TACGAGCTGTCAGATTCT
rJMSF013C19+          CGTAGTAATAGAGCAACAAGAAACCGTATCAACTATAAACAGTACGAGCTGTCAGATTCT
rJMSF007G09+          CGTAGTAATAGAGCAACAAGAAACCGTATCAACTATAANCAGTACGAGCTGTCAGATTCT
                      ____________________________________________________________
consensus             CGTAGTAATAGAGCAACAAGAAACCGTATCAACTATAAACAGTACGAGCTGTCAGATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GAGACCGAATCGATGAAACCTGAGACATCAAATGCTTCAGATGAGCACTACAATGCTACT
rJMSF003B12+          GAGACCGAATCGATGAAACCTGAGACATCAAATGCTTCAGATGAGCACTACAATGCTACT
rJMSF013C19+          GAGACCGAATCGATGAAACCTGAGACATCAAATGCTTCAGATGAGCACTACAATGCTACT
rJMSF007G09+          GAGACCGAATCGATGAAACCTGAGACATCAAATGCTTCAGATGAGCACTACAATGCTACT
                      ____________________________________________________________
consensus             GAGACCGAATCGATGAAACCTGAGACATCAAATGCTTCAGATGAGCACTACAATGCTACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GATAATGATAATGAGAATGAGAATGATAATGCTGACTCCTCATCCGAAAGTGCAGAGTCG
rJMSF003B12+          GATAATGATAATGAGAATGAGAATGATAATGCTGACTCCTCATCCGAAAGTGCAGAGTCG
rJMSF013C19+          GATAATGATAATGAGAATGAGAATGATAATGCTGACTCCTCATCCGAAAGTGCAGAGTCG
rJMSF007G09+          GATAATGATAATGAGAATGAGAATGATAATGCTGACTCCTCATCCGAAAGTGCAGAGTCG
                      ____________________________________________________________
consensus             GATAATGATAATGAGAATGAGAATGATAATGCTGACTCCTCATCCGAAAGTGCAGAGTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          AAGGAAGATGATAACAACGAGGAAATGAAAATCGACCCACAAGTTGAGATGCCATCTGAG
rJMSF003B12+          AAGGAAGATGATAACAACGAGGAAATGAAAATCGACCCACAAGTTGAGATGCCATCTGAG
rJMSF013C19+          AAGGAAGATGATAACAACGAGGAAATGAAAATCGACCCACAAGTTGAGATGCCATCTGAG
rJMSF007G09+          AAGGAAGATGATAACAACGAGGAAATGAAAATCGACCCACAAGTTGAGATGCCATCTGAG
                      ____________________________________________________________
consensus             AAGGAAGATGATAACAACGAGGAAATGAAAATCGACCCACAAGTTGAGATGCCATCTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GAGGCCATAACCAAAGAGGAAGCTGAAGCTGATACTGATCTGCCAAAGAAACCACCGAGC
rJMSF003B12+          GAGGCCATAACCAAAGAGGAAGCTGAAGCTGATACTGATCTGCCAAAGAAACCACCGAGC
rJMSF013C19+          GAGGCCATAACCAAAGAGGAAGCTGAAGCTGATACTGATCTGCCAAAGAAACCACCGAGC
rJMSF007G09+          GAGGCCATAACCAAAGAGGAAGCTGAAGCTGATACTGATCTGCCAAAGAAACCACCGAGC
                      ____________________________________________________________
consensus             GAGGCCATAACCAAAGAGGAAGCTGAAGCTGATACTGATCTGCCAAAGAAACCACCGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          CCAGATCAAGATGAAGTTGAAGGTGGACAAAAGCGGCACTTTCTTGACCTAAACGAGCTC
rJMSF003B12+          CCAGATCAAGATGAAGTTGAAGGTGGACAAAAGCGGCACTTTCTTGACCTAAACGAGCTC
rJMSF013C19+          CCAGATCAAGATGAAGTTGAAGGTGGACAAAAGCGGCACTTTCTTGACCTAAACGAGCTC
rJMSF007G09+          CCAGATCAAGATGAAGTTGAAGGTGGACAAAAGCGGCACTTTCTTGACCTAAACGAGCTC
                      ____________________________________________________________
consensus             CCAGATCAAGATGAAGTTGAAGGTGGACAAAAGCGGCACTTTCTTGACCTAAACGAGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GCCCCAGGTTCTGGTTTCGATGATGCTCCTCCCAATTCAGAGGTGAAAGACAATGGCGCA
rJMSF003B12+          GCCCCAGGTTCTGGTTTCGATGATGCTCCTCCCAATTCAGAGGTGAAAGACAATGGCGCA
rJMSF013C19+          GCCCCAGGTTCTGGTTTCGATGATGCTCCTCCCAATTCAGAGGTGAAAGACAATGGCGCA
rJMSF007G09+          GCCCCAGGTTCTGGTTTCGATGATGCTCCTCCCAATTCAGAGGTGAAAGACAATGGCGCA
                      ____________________________________________________________
consensus             GCCCCAGGTTCTGGTTTCGATGATGCTCCTCCCAATTCAGAGGTGAAAGACAATGGCGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GCAGATGAGTTTTGAACAAGTTATCCCCTTTAGTGCTTTTGTTTTGCAGAAGCTGAGATT
rJMSF003B12+          GCAGATGAGTTTTGAACAAGTTATCCCCTTTAGTGCTTTTGTTTTGCAGAAGCTGAGATT
rJMSF013C19+          GCAGATGAGTTTTGAACAAGTTATCCCCTTTAGTGCTTTTGTTTTGCAGAAGCTGAGATT
rJMSF007G09+          GCAGATGAGTTTTGAACAAGTTATCCCCTTTAGTGCTTTTGTTTTGCAGAAGCTGAGATT
                      ____________________________________________________________
consensus             GCAGATGAGTTTTGAACAAGTTATCCCCTTTAGTGCTTTTGTTTTGCAGAAGCTGAGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GTATGATAATTGACTTATAAATTTTCCAGAGCACCCACTTCAGAGATGGAAGTGATGCAT
rJMSF003B12+          GTATGATAATTGACTTATAAATTTTCCAGAGCACCCACTTCAGAGATGGAAGTGATGCAT
rJMSF013C19+          GTATGATAATTGACTTATAAATTTTCCAGAGCACCCACTTCAGAGATGGAAGTGATGCAT
rJMSF007G09+          GTATGATAATTGACTTATAAATTTTCCAGAGCACCCACTTCAGAGATGGAAGTGATGCAT
                      ____________________________________________________________
consensus             GTATGATAATTGACTTATAAATTTTCCAGAGCACCCACTTCAGAGATGGAAGTGATGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          GCATGCAGTAGTGTTCTCTCTTCTCTTGGCAAATTTTAAAATCGGCTATGAGGCTTGCTT
rJMSF003B12+          GCATGCAGTAGTGTTCTCTCTTCTCTTGGCAAATTTTAAAATCGGCTATGAGGCTTGCTT
rJMSF013C19+          GCATGCAGTAGTGTTCTCTCTTCTCTTGGCAAATTTTAAAATCGGCTATGAGGCTTGCTT
rJMSF007G09+          GCATGCAGTAGTGTTCTCTCTTCTCTTGGCAAATTTTAAAATCGGCTATGAGGCTTGCTT
                      ____________________________________________________________
consensus             GCATGCAGTAGTGTTCTCTCTTCTCTTGGCAAATTTTAAAATCGGCTATGAGGCTTGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          CGCGTTTACTCTTATTATATGATGATGCTGAGGAATTACGTAGATTCAGTTAGCCATTGT
rJMSF003B12+          CGCGTTTACTCTTATTATATGATGATGCTGAGGAATTACGTAGATTCAGTTAGCCATTGT
rJMSF013C19+          CGCGTTTACTCTTATTATATGATGATGCTGAGGAATTACGTAGATTCAGTTAGCCATTGT
rJMSF007G09+          CGCGTTTACTCTTATTATATGATGATGCTGAGGAATTACGTAGATTCAGTTAGCCATTGT
                      ____________________________________________________________
consensus             CGCGTTTACTCTTATTATATGATGATGCTGAGGAATTACGTAGATTCAGTTAGCCATTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          TTTAGAACATCTAAATTTGAGTCAATGGGGTATGCATGGGAAATTTGTTGTTTCTGGGCT
rJMSF003B12+          TTTAGAACATCTAAATTTGAGTCAATGGGGTATGCATGGGAAATTTGTTGTNTCTGGGCT
rJMSF013C19+          TTTAGAACATCTAAATTTGAGTCAATGGGGTATGCATGGGAAATTTGTTGTTTCTGGGCT
rJMSF007G09+          TTTAGAACATCTAAATTTGAGTCAATGGGGTATGCATGGGAAATTTGTTGTTTCTGGGCT
                      ____________________________________________________________
consensus             TTTAGAACATCTAAATTTGAGTCAATGGGGTATGCATGGGAAATTTGTTGTTTCTGGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF026I14+          CTGCCTCTTACCCCTATCTCTGTACAATAGCCT                           
rJMSF003B12+          CTGCCTCTTACCCCTATCTCTGTACAATAGCCT                           
rJMSF013C19+          CTGCCTCTTACCCCTATCTCTGTACAATAGCCTTTTAACTTAATATTG            
rJMSF007G09+          CTGCCTCTTACCCCTATCTCTGTACAATAGCCTTTTAACTTAATATTGTAACAAACATAT
                      ____________________________________________________________
consensus             CTGCCTCTTACCCCTATCTCTGTACAATAGCCTTTTAACTTAATATTGTAACAAACATAT