Contig 013883:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS078B10Sequence626013883 (2)ref|XP_004244413.1|3e-24PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Solanum lycop
JMSF007F07Sequence321004919 (2)759013883 (2)ref|XP_008373519.1|3e-48PREDICTED: extra-large guanine nucleotide-binding protein 3 [Malus domestica] r

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS078B10- TCTCTCTCTCTCTCTCTCTAGAATTCTCTCTATGTACACCTCCATAAGTCTGTGTGTATA
                      ____________________________________________________________
consensus TCTCTCTCTCTCTCTCTCTAGAATTCTCTCTATGTACACCTCCATAAGTCTGTGTGTATA
 
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JMFS078B10- TAATCTGTCATTTAGCAGCTTCTTCTTCTTCTAAATGGTAGATTCCCCAAAAGACTACAT
                      ____________________________________________________________
consensus TAATCTGTCATTTAGCAGCTTCTTCTTCTTCTAAATGGTAGATTCCCCAAAAGACTACAT
 
. : . : . : . : . : . :
JMFS078B10- TTTCATTTTTCATTTTTCATTCACCCCTTTAATATTTCTTTTTCTTTTTATCTTTTTTGC
                      ____________________________________________________________
consensus TTTCATTTTTCATTTTTCATTCACCCCTTTAATATTTCTTTTTCTTTTTATCTTTTTTGC
 
. : . : . : . : . : . :
JMFS078B10- ACTTTGGGGCTTCGAAAAGTTAAGCTATTTTTGACTCCTCTCAACCTCATCCTTGGTTTC
                      ____________________________________________________________
consensus ACTTTGGGGCTTCGAAAAGTTAAGCTATTTTTGACTCCTCTCAACCTCATCCTTGGTTTC
 
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JMFS078B10- ATAATCTTAGTTTGTCTGTTTCTCAGCATTGTTCTTTTTGCGTAATGGATGTGGAGTTTA
rJMSF007F07+ CAGCATTGTTCTTTTTGCGTAATGGATGTGGAGTTTA
                      ____________________________________________________________
consensus ATAATCTTAGTTTGTCTGTTTCTCAGCATTGTTCTTTTTGCGTAATGGATGTGGAGTTTA
 
. : . : . : . : . : . :
JMFS078B10- GAAGTATTTAGAAGTTATAGTTTGGGAAATCGAAGGTGCGGATAGAGGGGAGAGTTGGTC
rJMSF007F07+ GAAGTATTTAGAAGTTATAGTTTGGGAAATCGAAGGTGCGGATAGAGGGGAGAGTTGGTC
                      ____________________________________________________________
consensus GAAGTATTTAGAAGTTATAGTTTGGGAAATCGAAGGTGCGGATAGAGGGGAGAGTTGGTC
 
. : . : . : . : . : . :
JMFS078B10- AAAATCTGTGCGAGCAAAGATGGAGAAAGATAAGGGTGAGAATTGGAGGGAGATGGTGAG
rJMSF007F07+ AAAATCTGTGCGAGCAAAGATGGAGAAAGATAAGGGTGAGAATTGGAGGGAGATGGTGAG
                      ____________________________________________________________
consensus AAAATCTGTGCGAGCAAAGATGGAGAAAGATAAGGGTGAGAATTGGAGGGAGATGGTGAG
 
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JMFS078B10- AACGATGCTTCCTCCGGGGGTTCCCGTCCCAGCAGAGGGAGCTAATCTGGATTACTCGAT
rJMSF007F07+ AACGATGCTTCCTCCGGGGGTTCCCGTCCCAGCAGAGGGAGCTAATCTGGATTACTCGAT
                      ____________________________________________________________
consensus AACGATGCTTCCTCCGGGGGTTCCCGTCCCAGCAGAGGGAGCTAATCTGGATTACTCGAT
 
. : . : . : . : . : . :
JMFS078B10- AGCTCTAGAGTACAAGGGTCCTCCAATACTATATGACCTTCCAAGGGTAGAGCCGATTGA
rJMSF007F07+ AGCTCTAGAGTACAAGGGTCCTCCAATACTATATGACCTTCCAAGGGTAGAGCCGATTGA
                      ____________________________________________________________
consensus AGCTCTAGAGTACAAGGGTCCTCCAATACTATATGACCTTCCAAGGGTAGAGCCGATTGA
 
. : . : . : . : . : . :
JMFS078B10- TGTGAACTCCGATTCGATTCCAACAGCATCTGAAGCAGAATCTCTTTCAGAATCCGGAAG
rJMSF007F07+ TGTGAACTCCGATTCGATTCCAACAGCATCTGAAGCAGAATCTCTTTCAGAATCCGGAAG
                      ____________________________________________________________
consensus TGTGAACTCCGATTCGATTCCAACAGCATCTGAAGCAGAATCTCTTTCAGAATCCGGAAG
 
. : . : . : . : . : . :
JMFS078B10- ACCAATGATCCATGATGCTGCCCCGG
rJMSF007F07+ ACCAATGATCCATGATGCTGCCCCGGTCATTGAACCAATCCCCCTGCCTGTCTCGTGTAT
                      ____________________________________________________________
consensus ACCAATGATCCATGATGCTGCCCCGGTCATTGAACCAATCCCCCTGCCTGTCTCGTGTAT
 
. : . : . : . : . : . :
rJMSF007F07+ TGCTGGTGTCACCAGTCCACCCGGTCAAAGTCCGAGGCTGTCGAGAAGCTCAGAGTCCCA
                      ____________________________________________________________
consensus TGCTGGTGTCACCAGTCCACCCGGTCAAAGTCCGAGGCTGTCGAGAAGCTCAGAGTCCCA
 
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rJMSF007F07+ GGTGTCGGTTCTTCGGAGCCCTGGATCTTCATCGGGTTCTCCCTCAGCATCACCTAGCTC
                      ____________________________________________________________
consensus GGTGTCGGTTCTTCGGAGCCCTGGATCTTCATCGGGTTCTCCCTCAGCATCACCTAGCTC
 
. : . : . : . : . : . :
rJMSF007F07+ TGCACACAACCCTCCAGATGATGCTCCAAAACTGGCCGTCAATGAAGGCAGGAGAGCTCC
                      ____________________________________________________________
consensus TGCACACAACCCTCCAGATGATGCTCCAAAACTGGCCGTCAATGAAGGCAGGAGAGCTCC
 
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rJMSF007F07+ AGTGGTGACTTTCAATACCGTTGATAGATCTGAGCAGAAAAGGGTGGAATGGAGAACCAA
                      ____________________________________________________________
consensus AGTGGTGACTTTCAATACCGTTGATAGATCTGAGCAGAAAAGGGTGGAATGGAGAACCAA