Contig 013883:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS078B10Sequence626013883 (2)ref|XP_004244413.1|3e-24PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Solanum lycop
JMSF007F07Sequence321004919 (2)759013883 (2)ref|XP_008373519.1|3e-48PREDICTED: extra-large guanine nucleotide-binding protein 3 [Malus domestica] r

Alignment

This contig is upended


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JMFS078B10-           TCTCTCTCTCTCTCTCTCTAGAATTCTCTCTATGTACACCTCCATAAGTCTGTGTGTATA
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTCTCTAGAATTCTCTCTATGTACACCTCCATAAGTCTGTGTGTATA
 
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JMFS078B10-           TAATCTGTCATTTAGCAGCTTCTTCTTCTTCTAAATGGTAGATTCCCCAAAAGACTACAT
                      ____________________________________________________________
consensus             TAATCTGTCATTTAGCAGCTTCTTCTTCTTCTAAATGGTAGATTCCCCAAAAGACTACAT
 
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JMFS078B10-           TTTCATTTTTCATTTTTCATTCACCCCTTTAATATTTCTTTTTCTTTTTATCTTTTTTGC
                      ____________________________________________________________
consensus             TTTCATTTTTCATTTTTCATTCACCCCTTTAATATTTCTTTTTCTTTTTATCTTTTTTGC
 
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JMFS078B10-           ACTTTGGGGCTTCGAAAAGTTAAGCTATTTTTGACTCCTCTCAACCTCATCCTTGGTTTC
                      ____________________________________________________________
consensus             ACTTTGGGGCTTCGAAAAGTTAAGCTATTTTTGACTCCTCTCAACCTCATCCTTGGTTTC
 
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JMFS078B10-           ATAATCTTAGTTTGTCTGTTTCTCAGCATTGTTCTTTTTGCGTAATGGATGTGGAGTTTA
rJMSF007F07+                                 CAGCATTGTTCTTTTTGCGTAATGGATGTGGAGTTTA
                      ____________________________________________________________
consensus             ATAATCTTAGTTTGTCTGTTTCTCAGCATTGTTCTTTTTGCGTAATGGATGTGGAGTTTA
 
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JMFS078B10-           GAAGTATTTAGAAGTTATAGTTTGGGAAATCGAAGGTGCGGATAGAGGGGAGAGTTGGTC
rJMSF007F07+          GAAGTATTTAGAAGTTATAGTTTGGGAAATCGAAGGTGCGGATAGAGGGGAGAGTTGGTC
                      ____________________________________________________________
consensus             GAAGTATTTAGAAGTTATAGTTTGGGAAATCGAAGGTGCGGATAGAGGGGAGAGTTGGTC
 
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JMFS078B10-           AAAATCTGTGCGAGCAAAGATGGAGAAAGATAAGGGTGAGAATTGGAGGGAGATGGTGAG
rJMSF007F07+          AAAATCTGTGCGAGCAAAGATGGAGAAAGATAAGGGTGAGAATTGGAGGGAGATGGTGAG
                      ____________________________________________________________
consensus             AAAATCTGTGCGAGCAAAGATGGAGAAAGATAAGGGTGAGAATTGGAGGGAGATGGTGAG
 
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JMFS078B10-           AACGATGCTTCCTCCGGGGGTTCCCGTCCCAGCAGAGGGAGCTAATCTGGATTACTCGAT
rJMSF007F07+          AACGATGCTTCCTCCGGGGGTTCCCGTCCCAGCAGAGGGAGCTAATCTGGATTACTCGAT
                      ____________________________________________________________
consensus             AACGATGCTTCCTCCGGGGGTTCCCGTCCCAGCAGAGGGAGCTAATCTGGATTACTCGAT
 
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JMFS078B10-           AGCTCTAGAGTACAAGGGTCCTCCAATACTATATGACCTTCCAAGGGTAGAGCCGATTGA
rJMSF007F07+          AGCTCTAGAGTACAAGGGTCCTCCAATACTATATGACCTTCCAAGGGTAGAGCCGATTGA
                      ____________________________________________________________
consensus             AGCTCTAGAGTACAAGGGTCCTCCAATACTATATGACCTTCCAAGGGTAGAGCCGATTGA
 
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JMFS078B10-           TGTGAACTCCGATTCGATTCCAACAGCATCTGAAGCAGAATCTCTTTCAGAATCCGGAAG
rJMSF007F07+          TGTGAACTCCGATTCGATTCCAACAGCATCTGAAGCAGAATCTCTTTCAGAATCCGGAAG
                      ____________________________________________________________
consensus             TGTGAACTCCGATTCGATTCCAACAGCATCTGAAGCAGAATCTCTTTCAGAATCCGGAAG
 
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JMFS078B10-           ACCAATGATCCATGATGCTGCCCCGG                                  
rJMSF007F07+          ACCAATGATCCATGATGCTGCCCCGGTCATTGAACCAATCCCCCTGCCTGTCTCGTGTAT
                      ____________________________________________________________
consensus             ACCAATGATCCATGATGCTGCCCCGGTCATTGAACCAATCCCCCTGCCTGTCTCGTGTAT
 
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rJMSF007F07+          TGCTGGTGTCACCAGTCCACCCGGTCAAAGTCCGAGGCTGTCGAGAAGCTCAGAGTCCCA
                      ____________________________________________________________
consensus             TGCTGGTGTCACCAGTCCACCCGGTCAAAGTCCGAGGCTGTCGAGAAGCTCAGAGTCCCA
 
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rJMSF007F07+          GGTGTCGGTTCTTCGGAGCCCTGGATCTTCATCGGGTTCTCCCTCAGCATCACCTAGCTC
                      ____________________________________________________________
consensus             GGTGTCGGTTCTTCGGAGCCCTGGATCTTCATCGGGTTCTCCCTCAGCATCACCTAGCTC
 
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rJMSF007F07+          TGCACACAACCCTCCAGATGATGCTCCAAAACTGGCCGTCAATGAAGGCAGGAGAGCTCC
                      ____________________________________________________________
consensus             TGCACACAACCCTCCAGATGATGCTCCAAAACTGGCCGTCAATGAAGGCAGGAGAGCTCC
 
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rJMSF007F07+          AGTGGTGACTTTCAATACCGTTGATAGATCTGAGCAGAAAAGGGTGGAATGGAGAACCAA
                      ____________________________________________________________
consensus             AGTGGTGACTTTCAATACCGTTGATAGATCTGAGCAGAAAAGGGTGGAATGGAGAACCAA