Contig 013879:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF003F13-               GGGGTGAACCTAAAGCAAAAACACTAGCTGGGAATCTTTCTCTCTTCCACGTCCCC
JMSF047F03-               GGGGTGAACCTAAAGCAAAAACACTAGCTGGGAATCTTTCTCTCTTCCACGTCCCC
                      ____________________________________________________________
consensus                 GGGGTGAACCTAAAGCAAAAACACTAGCTGGGAATCTTTCTCTCTTCCACGTCCCC
 
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JMSF003F13-           TTTTGCCTGAAATGAAATGAGGTATTCAAAAATAGAAATGAGATCAGTAATCTATGCTTC
JMSF047F03-           TTTTGCCTGAAATGAAATGAGGTATTCAAAAATAGAAATGAGATCAGTAATCTATGCTTC
                      ____________________________________________________________
consensus             TTTTGCCTGAAATGAAATGAGGTATTCAAAAATAGAAATGAGATCAGTAATCTATGCTTC
 
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JMSF003F13-           ACAAAATGGGGGAAAAGGGGCAACAGGCGACTACAAAGTCGATCATGAAACTATGCTTAG
JMSF047F03-           ACAAAATGGGGGAAAAGGGGCAACAGGCGACTACAAAGTCGATCATGAAACTATGCTTAG
                      ____________________________________________________________
consensus             ACAAAATGGGGGAAAAGGGGCAACAGGCGACTACAAAGTCGATCATGAAACTATGCTTAG
 
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JMSF003F13-           TCGTACGTTCTTCATCCGATCAGGTAACAGCTTAATTTTAATTTTGTAATACCTATTGTG
JMSF047F03-           TCGTACGTTCTTCATCCGATCAGGTAACAGCTTAATTTTAATTTTGTAATACCTATTGTG
                      ____________________________________________________________
consensus             TCGTACGTTCTTCATCCGATCAGGTAACAGCTTAATTTTAATTTTGTAATACCTATTGTG
 
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JMSF003F13-           GTATTTTGAGTGGAGCTTTTGGTGTGCCTATATATGGTGGCTCTTTAGGTCTTCAATTCG
JMSF047F03-           GTATTTTGAGTGGAGCTTTTGGTGTGCCTATATATGGTGGCTCTTTAGGTCTTCAATTCG
                      ____________________________________________________________
consensus             GTATTTTGAGTGGAGCTTTTGGTGTGCCTATATATGGTGGCTCTTTAGGTCTTCAATTCG
 
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JMSF003F13-           CCACCACCGCCGAATCAATCCTTCGCCAACAAGCTAGTTTCGCCACCACCCCGCCGGAGC
JMSF047F03-           CCACCACCGCCGAATCAATCCTTCGCCAACAAGCTAGTTTCGCCACCACCCCGCCGGAGC
                      ____________________________________________________________
consensus             CCACCACCGCCGAATCAATCCTTCGCCAACAAGCTAGTTTCGCCACCACCCCGCCGGAGC
 
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JMSF003F13-           TCACAGCCACGCCG                                              
JMSF047F03-           TCACAGCCACGCCGGAGAGTCGCCAGAAACCGGGGAGAGGGAGAGAGCTGACGCCGGAAA
rJMSF047F03+                                           GGAGAGGGAGAGAGCTGACGCCGGAAA
rJMSF003F13+                                           GGAGAGGGAGAGAGCTGACGCCGGAAA
                      ____________________________________________________________
consensus             TCACAGCCACGCCGGAGAGTCGCCAGAAACCGGGGAGAGGGAGAGAGCTGACGCCGGAAA
 
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JMSF047F03-           AGCTGCACTGCCGGAGGGGCTCTGCTTACGTCGGACGCTGGAGCTCGCCGGATCTTCTTG
rJMSF047F03+          AGCTGCACTGCCGGAGGGGCTCTGCTTACGTCGGACGCTGGAGCTCGCCGGATCTTCTTG
rJMSF003F13+          AGCTGCACTGCCGGAGGGGCTCTGCTTACGTCGGACGCTGGAGCTCGCCGGATCTTCTTG
                      ____________________________________________________________
consensus             AGCTGCACTGCCGGAGGGGCTCTGCTTACGTCGGACGCTGGAGCTCGCCGGATCTTCTTG
 
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JMSF047F03-           CCGTTCTTCGCTGTCCTCGACCAATCCACCGCCGTAGGAGTACCCGCGTAGCTCTGTTGC
rJMSF047F03+          CCGTTCTTCGCTGTCCTCGACCAATCCACCGCCGTAGGAGTACCCGCGTAGCTCTGTTGC
rJMSF003F13+          CCGTTCTTCGCTGTCCTCGACCAATCCACCGCCGTAGGAGTACCCGCGTAGCTCTGTTGC
                      ____________________________________________________________
consensus             CCGTTCTTCGCTGTCCTCGACCAATCCACCGCCGTAGGAGTACCCGCGTAGCTCTGTTGC
 
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JMSF047F03-           TGAGCTGGGAGGGGGGGTCTCCAGAGTACGCCGTCCACCGGAGAAGACAGTCAAGATGAG
rJMSF047F03+          TGAGCTGGGAGGGGGGGTCTCCAGAGTACGCCGTCCACCGGAGAAGACAGTCAAGATGAG
rJMSF003F13+          TGAGCTGGGAGGGGGGGTCTCCAGAGTACGCCGTCCACCGGAGAAGACAGTCAAGATGAG
                      ____________________________________________________________
consensus             TGAGCTGGGAGGGGGGGTCTCCAGAGTACGCCGTCCACCGGAGAAGACAGTCAAGATGAG
 
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JMSF047F03-           AGATTTGTTTGGTGGCCTAGGG                                      
rJMSF047F03+          AGATTTGTTTGGTGGCCTAGGGAAGCCGAGTGGGCTCTTAGTCAGAATATTGCAGTGTGT
rJMSF003F13+          AGATTTGTTTGGTGGCCTAGGGAAGCCGAGTGGGCTCTTAGTCAGAATATTGCAGTGTGT
                      ____________________________________________________________
consensus             AGATTTGTTTGGTGGCCTAGGGAAGCCGAGTGGGCTCTTAGTCAGAATATTGCAGTGTGT
 
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rJMSF047F03+          ATTTTCACTTGCTTCCGCTGGAGTAATGGTTTTAGCTTCATACTTCATAAGGAACACCAG
rJMSF003F13+          ATTTTCACTTGCTTCCGCTGGAGTAATGGTTTTAGCTTCATACTTCATAAGGAACACCAG
                      ____________________________________________________________
consensus             ATTTTCACTTGCTTCCGCTGGAGTAATGGTTTTAGCTTCATACTTCATAAGGAACACCAG
 
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rJMSF047F03+          TTTTTGGTGCTTGGCACTTGTGATGGGGGTTCTATTTTTATGGAGTTTAAGTCTATCTTG
rJMSF003F13+          TTTTTGGTGCTTGGCACTTGTGATGGGGGTTCTATTTTTATGGAGTTTAAGTCTATCTTG
                      ____________________________________________________________
consensus             TTTTTGGTGCTTGGCACTTGTGATGGGGGTTCTATTTTTATGGAGTTTAAGTCTATCTTG
 
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rJMSF047F03+          CCTGGATTTTCATTCCATAATGTTCAGAAGGAGAGGGCATTCTGTTTTCCTTCTAGTCCT
rJMSF003F13+          CCTGGATTTTCATTCCATAATGTTCAGAAGGAGAGGGCATTCTGTTTTCCTTCTAGTCCT
                      ____________________________________________________________
consensus             CCTGGATTTTCATTCCATAATGTTCAGAAGGAGAGGGCATTCTGTTTTCCTTCTAGTCCT
 
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rJMSF047F03+          GATTTGTATTGGTGACTGGGTGATGACGATTATATCTCTTGGTGTTGCATGCGCATCTGC
rJMSF003F13+          GATTTGTATTGGTGACTGGGTGATGACGATTATATCTCTTGGTGTTGCATGCGCATCTGC
                      ____________________________________________________________
consensus             GATTTGTATTGGTGACTGGGTGATGACGATTATATCTCTTGGTGTTGCATGCGCATCTGC
 
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rJMSF047F03+          TGGTGTAGTGAATTTTCTATACAAGTTTGATAGTTGCTATAAGCTGTACATGCCATGCAA
rJMSF003F13+          TGGTGTAGTGAATTTTCTATACAAGTTTGATAGTTGCTATAAGCTGTACATGCCATGCAA
                      ____________________________________________________________
consensus             TGGTGTAGTGAATTTTCTATACAAGTTTGATAGTTGCTATAAGCTGTACATGCCATGCAA
 
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rJMSF047F03+          CATGTATCGTCTTTCAATTGCACTAGCATTTGTCGCTTGCTTCTTTATAGCGATTTCTGC
rJMSF003F13+          CATGTATCGTCTTTCAATTGCACTAGCATTTGTCGCTTGCTTCTTTATAGCGATTTCTGC
                      ____________________________________________________________
consensus             CATGTATCGTCTTTCAATTGCACTAGCATTTGTCGCTTGCTTCTTTATAGCGATTTCTGC
 
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rJMSF047F03+          TAGTGTTATGTTTAGGCTTGTAGTCTCGTCTTATTAGATATAAGCTGCTACGGATCTTTC
rJMSF003F13+          TAGTGTTATGTTTAGGCTTGTAGTCTCGTCTTATTAGATATAAGCTGCTACGGATCTTTC
                      ____________________________________________________________
consensus             TAGTGTTATGTTTAGGCTTGTAGTCTCGTCTTATTAGATATAAGCTGCTACGGATCTTTC
 
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rJMSF047F03+          TATTGTAAATAGTACTACTAGGTGGTTATGTGTTTCTTTTATGATGTTTAGG        
rJMSF003F13+          TATTGTAAATAGTACTACTAGGTGGTTATGTGTTTCTTTTATGATGTTTAGGTGGGCATG
                      ____________________________________________________________
consensus             TATTGTAAATAGTACTACTAGGTGGTTATGTGTTTCTTTTATGATGTTTAGGTGGGCATG