Contig 013875:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042I07Sequence659000236 (4)emb|CDP06945.1|3e-92unnamed protein product [Coffea canephora]591013875 (2)ref|XP_004241314.1|4e-69PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]
JMSF002A06Sequence264000236 (4)gb|EYU36077.1|3e-32hypothetical protein MIMGU_mgv1a018441mg, partial [Erythranthe guttata]741013875 (2)ref|XP_009631061.1|5e-93PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Nicotiana tomentosiformi

Alignment

This contig is upended


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rJMSF002A06+                                                 TAGATGTGATCCCAGCTGATA
                      ____________________________________________________________
consensus                                                    TAGATGTGATCCCAGCTGATA
 
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rJMSF002A06+          TGGTGGTGAATGCAATGATAGTAGCAATGGTTGGGCATGCAGATGAAAGAGGGTGTGAGA
                      ____________________________________________________________
consensus             TGGTGGTGAATGCAATGATAGTAGCAATGGTTGGGCATGCAGATGAAAGAGGGTGTGAGA
 
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rJMSF002A06+          GAATATACCATGTGGGATCGTCGGTATCTAACCCATTGGAGCTCCCGTGGATACAGGATT
                      ____________________________________________________________
consensus             GAATATACCATGTGGGATCGTCGGTATCTAACCCATTGGAGCTCCCGTGGATACAGGATT
 
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rJMFF042I07+                      ACTTCTCCAAGCATCCATGGATAGGCAAGGATGGAAAGCCTGTTATCG
rJMSF002A06+          TTGGGTACCGACACTTCTCCAAGCATCCATGGATAGGCAAGGATGGAAAGCCTGTTATCG
                      ____________________________________________________________
consensus             TTGGGTACCGACACTTCTCCAAGCATCCATGGATAGGCAAGGATGGAAAGCCTGTTATCG
 
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rJMFF042I07+          TCGGGAAGGTGACTGTGTTAAGCACCATGGCTAGCTTCCAAACATACATGGCCATTCATT
rJMSF002A06+          TCGGGAAGGTGACTGTGTTAAGCACCATGGCTAGCTTCCAAACATACATGGCCATTCATT
                      ____________________________________________________________
consensus             TCGGGAAGGTGACTGTGTTAAGCACCATGGCTAGCTTCCAAACATACATGGCCATTCATT
 
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rJMFF042I07+          ATCTACTCCCTTTGAAGGGGTTGGAGATAGTGAACACTGCATGTTGTCAGTATTTCCAGA
rJMSF002A06+          ATCTACTCCCTTTGAAGGGGTTGGAGATAGTGAACACTGCATGTTGTCAGTATTTCCAGA
                      ____________________________________________________________
consensus             ATCTACTCCCTTTGAAGGGGTTGGAGATAGTGAACACTGCATGTTGTCAGTATTTCCAGA
 
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rJMFF042I07+          GTATATACCATGAGATGGATAGGAAAATCAAGTTTGTGTTGAAGCTGGTAGACCTATATC
rJMSF002A06+          GTATATACCATGAGATGGATAGGAAAATCAAGTTTGTGTTGAAGCTGGTAGACCTATATC
                      ____________________________________________________________
consensus             GTATATACCATGAGATGGATAGGAAAATCAAGTTTGTGTTGAAGCTGGTAGACCTATATC
 
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rJMFF042I07+          GACCCTACTTATTCTTCAAGGGACTATATGATGATATGAACACAGAAAAATTGAGAAGAG
rJMSF002A06+          GACCCTACTTATTCTTCAAGGGACTATATGATGATATGAACACAGAAAAATTGAGAAGAG
                      ____________________________________________________________
consensus             GACCCTACTTATTCTTCAAGGGACTATATGATGATATGAACACAGAAAAATTGAGAAGAG
 
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rJMFF042I07+          CAGCAAAAGAAGGGGGCATCGAGACTGATTTGTTCTACTTTGACCCAAAAGTAATCTGCT
rJMSF002A06+          CAGCAAAAGAAGGGGGCATCGAGACTGATTTGTTCTACTTTGACCCAAAAGTAATCTGCT
                      ____________________________________________________________
consensus             CAGCAAAAGAAGGGGGCATCGAGACTGATTTGTTCTACTTTGACCCAAAAGTAATCTGCT
 
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rJMFF042I07+          GGGATGATTACTTCGTGAAGACCCACATTCCTGGATTAGTAAAACACGTTTTCAAGTGAT
rJMSF002A06+          GGGATGATTACTTCGTGAAGACCCACATTCCTGGATTAGTAAAACACGTTTTCAAGTGAT
                      ____________________________________________________________
consensus             GGGATGATTACTTCGTGAAGACCCACATTCCTGGATTAGTAAAACACGTTTTCAAGTGAT
 
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rJMFF042I07+          TTACATTAATCCTAAGTCAATCATTATTTACTATGAATCTTAGTACTGGGAAGCTGTATT
rJMSF002A06+          TTACATTAATCCTAAGTCAATCATTATTTACTATGAATCTTAGTACTGGGAAGCTGTATT
                      ____________________________________________________________
consensus             TTACATTAATCCTAAGTCAATCATTATTTACTATGAATCTTAGTACTGGGAAGCTGTATT
 
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rJMFF042I07+          CTTAATTAACTTGCATACTATTCTGTTTTTTTGTTCTACACTTGTACTGTACCCTCTGTA
rJMSF002A06+          CTTAATTAACTTGCATACTATTCTGTTTTTTTGTTCTACACTTGTACTGTACCCTCTGTA
                      ____________________________________________________________
consensus             CTTAATTAACTTGCATACTATTCTGTTTTTTTGTTCTACACTTGTACTGTACCCTCTGTA
 
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rJMFF042I07+          TGTTACCAAACTGTATTAATATATATTGAGTGTTACTCGTATT                 
rJMSF002A06+          TGTTACCAAACTGTATTAATATATATTGAGTGTTACTCGTATTATATAACTATGTAAAAT
                      ____________________________________________________________
consensus             TGTTACCAAACTGTATTAATATATATTGAGTGTTACTCGTATTATATAACTATGTAAAAT