Contig 013873:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001E16Sequence266003680 (3)ref|XP_009628041.1|93.2PREDICTED: malonate--CoA ligase-like isoform X1 [Nicotiana tomentosiformis]778013873 (6)ref|XP_009628043.1|198PREDICTED: malonate--CoA ligase-like isoform X3 [Nicotiana tomentosiformis]
JMSF004B19Sequence317013873 (6)ref|XP_009786717.1|2e-56PREDICTED: malonate--CoA ligase-like [Nicotiana sylvestris]379008427 (2)
JMSF008N02Sequence385018848743013873 (6)ref|XP_009786717.1|2e-83PREDICTED: malonate--CoA ligase-like [Nicotiana sylvestris]
JMSF017P22Sequence310003680 (3)ref|XP_009628042.1|125PREDICTED: malonate--CoA ligase-like isoform X2 [Nicotiana tomentosiformis]695013873 (6)ref|XP_009786717.1|3e-60PREDICTED: malonate--CoA ligase-like [Nicotiana sylvestris]
JMSF022F07Sequence701013873 (6)emb|CDO98014.1|2e-144unnamed protein product [Coffea canephora]
JMSF025A18Sequence425013873 (6)ref|XP_010254053.1|4e-22PREDICTED: malonate--CoA ligase [Nelumbo nucifera]

Alignment

This contig is upended


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JMSF022F07+                   TACATCATGTCCATGGGCTTTTCAATGCTTTATTTGCCCCTCTCTATGCAGG
                      ____________________________________________________________
consensus                     TACATCATGTCCATGGGCTTTTCAATGCTTTATTTGCCCCTCTCTATGCAGG
 
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JMSF022F07+           CTCCAAGGTGGAATTTATTCCAAAATTCAGCGTGAGGGGAATTTGGCAGAGATGGCGTGA
                      ____________________________________________________________
consensus             CTCCAAGGTGGAATTTATTCCAAAATTCAGCGTGAGGGGAATTTGGCAGAGATGGCGTGA
 
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JMSF022F07+           ATCGTATCCAAAAGATGGGGCTAAAGCCGATGATGCCATAACTGTATTCACTGGTGTTCC
                      ____________________________________________________________
consensus             ATCGTATCCAAAAGATGGGGCTAAAGCCGATGATGCCATAACTGTATTCACTGGTGTTCC
 
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JMSF022F07+           TACGATGTATACACGACTGATACAAGGCTATGAAGCTATGGACCCGGAATTACAGTCTAC
                      ____________________________________________________________
consensus             TACGATGTATACACGACTGATACAAGGCTATGAAGCTATGGACCCGGAATTACAGTCTAC
 
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JMSF022F07+           TTCTAGTTCAGCAGCAAAGAACTTGCGCCTTATGATGTGTGGCTCATCTGCACTTCCACT
                      ____________________________________________________________
consensus             TTCTAGTTCAGCAGCAAAGAACTTGCGCCTTATGATGTGTGGCTCATCTGCACTTCCACT
 
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JMSF022F07+           TCCCATCATGCAACGGTGGGAAACAATCACCGGGCACACCTTATTAGAAAGATATGGCAT
                      ____________________________________________________________
consensus             TCCCATCATGCAACGGTGGGAAACAATCACCGGGCACACCTTATTAGAAAGATATGGCAT
 
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JMSF022F07+           GACTGAGTTTGTCATGGCAATTTCCAATCCCCTACGAGGTAAACGCAAAGGAGGTACTGT
JMSF004B19+                                           TACGAGGTAAACGCAAAGGAGGTACTGT
rJMSF008N02+                                                    ACGCAAAGGAGGTACTGT
                      ____________________________________________________________
consensus             GACTGAGTTTGTCATGGCAATTTCCAATCCCCTACGAGGTAAACGCAAAGGAGGTACTGT
 
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JMSF022F07+           TGGCAAGCCATTTCCAGGCGTGCAGGCCAAGATCCTTTCAGAAGACGGGAGTGTTGATGA
JMSF004B19+           TGGCAAGCCATTTCCAGGCGTGCAGGCCAAGATCCTTTCAGAAGACGGGAGTGTTGATGA
rJMSF008N02+          TGGCNAGCCATTTCCAGGCGTGCAGGCCAAGATCCTTTCAGAAGACGGGAGTGTTGATGA
                      ____________________________________________________________
consensus             TGGCAAGCCATTTCCAGGCGTGCAGGCCAAGATCCTTTCAGAAGACGGGAGTGTTGATGA
 
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JMSF022F07+           TGCAACCGGGGTGGGGGAGCTCTGTATAAAAAGCCCTTCTTTGTTTAAAGGTTATTGGAA
JMSF004B19+           TGCAACCGGGGTGGGGGAGCTCTGTATAAAAAGCCCTTCTTTGTTTAAAGGTTATTGGAA
rJMSF008N02+          TGCAACCGGGGTGGGGGAGCTCTGTATAAAAAGCCCTTCTTTGTTTAAAGGTTATTGGAA
rJMSF017P22+                                                     TTTAAAGGTTATTGGAA
                      ____________________________________________________________
consensus             TGCAACCGGGGTGGGGGAGCTCTGTATAAAAAGCCCTTCTTTGTTTAAAGGTTATTGGAA
 
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JMSF022F07+           GCTTCCCGAGGTAACCAAAGATTCATTTACAAATGATGGATTTTTCAAGACGGGAGATGC
JMSF004B19+           GCTTCCCGAGGTAACCAAAGATTCATTTACAAATGATGGATTTTTCAAGACGGGAGATGC
rJMSF008N02+          GCTTCCCGAGGTAACCAAAGATTCATTTACAAATGATGGATTTTTCAAGACGGGAGATGC
rJMSF017P22+          GCTTCCCGAGGTAACCAAAGATTCATTTACAAATGATGGATTTTTCAAGACGGGAGATGC
rJMSF001E16+             TCCCGAGGTAACCAAAGATTCATTTACAAATGATGGATTTTTCAAGACGGGAGATGC
                      ____________________________________________________________
consensus             GCTTCCCGAGGTAACCAAAGATTCATTTACAAATGATGGATTTTTCAAGACGGGAGATGC
 
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JMSF022F07+           TGTAAGAGTGGATGAAGATGGATACTTTGTCATTTTGGGGCGTACAAATGCAGATATAAT
JMSF004B19+           TGTAAGAGTGGATGAAGATGGATACTTTGTCATTTTGGGGCGTACAAATGCAGATATAAT
rJMSF008N02+          TGTAAGAGTGGANGAAGATGGATACTTTGTCATTTTGGGGCGTACAAATGCAGATATAAT
rJMSF017P22+          TGTAAGAGTGGATGAAGATGGATACTTTGTCATTTTGGGGCGTACAAATGCAGATATAAT
rJMSF001E16+          TGTAAGAGTGGATGAAGATGGATACTTTGTCATTTTGGGGCGTACAAATGCAGATATAAT
                      ____________________________________________________________
consensus             TGTAAGAGTGGATGAAGATGGATACTTTGTCATTTTGGGGCGTACAAATGCAGATATAAT
 
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JMSF022F07+           GAAGGTTGGCGGGTATAAGCTCTCTGCACTCGAGATTGAAGCAGTTCTT           
JMSF004B19+           GAAGGTTGGCGGGTATAAGCTCTCTGCACTCGAGATTGAAGCAGTTCTT           
rJMSF008N02+          GAAGGTTGGCGGGTATAAGCTCTCTGCACTCGAGATTGAAGCAGTTCTTCTCGAGCATCC
rJMSF025A18+                                                                GCATCC
rJMSF017P22+          GAAGGTTGGCGGGTATAAGCTCTCTGCACTCGAGATTGAAGCAGTTCTTCTCGAGCATCC
rJMSF001E16+          GAAGGTTGGCGGGTATAAGCTCTCTGCACTCGAGATTGAAGCAGTTCTTCTCGAGCATCC
                      ____________________________________________________________
consensus             GAAGGTTGGCGGGTATAAGCTCTCTGCACTCGAGATTGAAGCAGTTCTTCTCGAGCATCC
 
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rJMSF008N02+          AGCCATCTCAGAGTGCTGTGTGCTCGGCCTACCAGATAAAGACTNCGGGGAGGCTGTGTG
rJMSF025A18+          AGCCATCTCAGAGTGCTGTGTGCTCGGCCTACCAGATAAAGACTACGGGGAGGCTGTGTG
rJMSF017P22+          AGCCATCTCAGAGTGCTGTGTGCTCGGCCTACCAGATAAAGACTACGGGGAGGCTGTGTG
rJMSF001E16+          AGCCATCTCAGAGTGCTGTGTGCTCGGCCTACCAGATAAAGACTACGGGGAGGCTGTGTG
                      ____________________________________________________________
consensus             AGCCATCTCAGAGTGCTGTGTGCTCGGCCTACCAGATAAAGACTACGGGGAGGCTGTGTG
 
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rJMSF008N02+          TGCAATAGTTGTGGCCGAGGCAGAGCTCAAACAGAAGCTCGAGCTAGAATCAAGCGAGTC
rJMSF025A18+          TGCAATAGTTGTGGCCGAGGCAGAGCTCNAACAGAAGCTCGAGCTAGAATCAAGCGAGTC
rJMSF017P22+          TGCAATAGTTGTGGCCGAGGCAGAGCTCAAACAGAAGCTCGAGCTAGAATCAAGCGAGTC
rJMSF001E16+          TGCAATAGTTGTGGCCGAGGCAGAGCTCAAACAGAAGCTCGAGCTAGAATCAAGCGAGTC
                      ____________________________________________________________
consensus             TGCAATAGTTGTGGCCGAGGCAGAGCTCAAACAGAAGCTCGAGCTAGAATCAAGCGAGTC
 
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rJMSF008N02+          TGTCCTCACCTTGCAACAACTCTCTGCTTGGGCTAAGGAAAAACTCGCCCCATACAAGAT
rJMSF025A18+          TGTCCTCACCTTGCANCAACTCTCTGCTTGGGCTAAGGAAAAACTCGCCCCATACAAGAT
rJMSF017P22+          TGTCCTCACCTTGCAACAACTCTCTGCTTGGGCTAAGGAAAAACTCGCCCCATACAAGAT
rJMSF001E16+          TGTCCTCACCTTGCAACAACTCTCTGCTTGGGCTAAGGAAAAACTCGCCCCATACAAGAT
                      ____________________________________________________________
consensus             TGTCCTCACCTTGCAACAACTCTCTGCTTGGGCTAAGGAAAAACTCGCCCCATACAAGAT
 
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rJMSF008N02+          ACCAACTGCTCTTTATCTGTGGGATTCACTGCCTCGTAATGCCATGGGAAAGGTGAACAA
rJMSF025A18+          ACCAACTGCTCTTTATCTGTGGGATTCACTGCCTCGTAATGCCATGGGAAAGGTGAACAA
rJMSF017P22+          ACCAACTGCTCTTTATCTGTGGGATTCACTGCCTCGTAATGCCATGGGAAAGGTGAACAA
rJMSF001E16+          ACCAACTGCTCTTTATCTGTGGGATTCACTGCCTCGTAATGCCATGGGAAAGGTGAACAA
                      ____________________________________________________________
consensus             ACCAACTGCTCTTTATCTGTGGGATTCACTGCCTCGTAATGCCATGGGAAAGGTGAACAA
 
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rJMSF008N02+          GAAAGAGCTGAAGAAAATTTTGGTTGATGATGATGGGATGAAGAACAACTGAATGATGGA
rJMSF025A18+          GAAAGAGCTGAAGAAAATTTTGGTTGATGATGATGGGATGAAGAACAACTGAATGATGGA
rJMSF017P22+          GAAAGAGCTGAAGAAAATTTTGGTTGATGATGATGGGATGAAGAACAACTGAATGATGGA
rJMSF001E16+          GAAAGAGCTGAAGAAAATTTTGGTTGATGATGATGGGATGAAGAACAACTGAATGATGGA
                      ____________________________________________________________
consensus             GAAAGAGCTGAAGAAAATTTTGGTTGATGATGATGGGATGAAGAACAACTGAATGATGGA
 
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rJMSF008N02+          TTAAGTACAAATGTAACTGGAGCTCTTGAACTGAAGCCTTATGCACTCTCACTCGANTGA
rJMSF025A18+          TTANGTACAAATGTAA-TGGAGCTCTTGAA-TGAAGCCTTATGCACTCTCACTCGATTGA
rJMSF017P22+          TTAAGTACAAATGTAA-TGGAGCTCTTGAA-TGAAGCCTTATGCACTCTCACTCGATTGA
rJMSF001E16+          TTAAGTACAAATGTAA-TGGAGCTCTTGAA-TGAAGCCTTATGCACTCTCACTCGATTGA
                      ____________________________________________________________
consensus             TTAAGTACAAATGTAA-TGGAGCTCTTGAA-TGAAGCCTTATGCACTCTCACTCGATTGA
 
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rJMSF008N02+          AATTAAAGTAAAACACAAAAATTCCTATGATTTTAAATATGTAATATTTTTTAGTG    
rJMSF025A18+          AATTAAAGTAAAACACAAAAATTCCTATGATTTTAAATATGTAATATTTTTTAGTG    
rJMSF017P22+          AATTAAAGTAAAACACAAAAATTCCTATGATTTTAAATATGTAATATTTTTTAGTGAAAA
rJMSF001E16+          AATTAAAGTAAAACACAAAAATTCCTATGATTTTAAATATGTAATATTTTTTAGTGAAAA
                      ____________________________________________________________
consensus             AATTAAAGTAAAACACAAAAATTCCTATGATTTTAAATATGTAATATTTTTTAGTGAAAA
 
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rJMSF017P22+          AATGTAATAATTTTTTATGTGTTAATAAATATTACATTTTTGCTAAAAGATATTTCACTG
rJMSF001E16+          AATGTAATAATTTTTTATGTGTTAATAAATATTACATTTTTGCTAAAAGATATTTCACTG
                      ____________________________________________________________
consensus             AATGTAATAATTTTTTATGTGTTAATAAATATTACATTTTTGCTAAAAGATATTTCACTG
 
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rJMSF017P22+          TTATTTATTGTGGAAGCATT                                        
rJMSF001E16+          TTATTTATTGTGGAAGCATTTCATGTAATGGGAACTTAATTGGAATATGATGTTTTGAGG
                      ____________________________________________________________
consensus             TTATTTATTGTGGAAGCATTTCATGTAATGGGAACTTAATTGGAATATGATGTTTTGAGG
 
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rJMSF001E16+          AGTACAAGGTTTGGATTAGACGATGTAAGCATTTCAAACTTCAAAGGTAGGGGCCTAGTC
                      ____________________________________________________________
consensus             AGTACAAGGTTTGGATTAGACGATGTAAGCATTTCAAACTTCAAAGGTAGGGGCCTAGTC