Contig 013872:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023H24Sequence441013872 (2)gb|EYU22095.1|8e-15hypothetical protein MIMGU_mgv11b0080702mg, partial [Erythranthe guttata]
JMSF001E01Sequence358023091ref|XP_008374157.1|1e-50PREDICTED: protein GPR107-like [Malus domestica]818013872 (2)gb|EYU22095.1|1e-82hypothetical protein MIMGU_mgv11b0080702mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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rJMSF001E01+                                CTTGATCGTGTTGATTGGACCGGTTGGTCGTTTTTGAA
                      ____________________________________________________________
consensus                                   CTTGATCGTGTTGATTGGACCGGTTGGTCGTTTTTGAA
 
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rJMSF001E01+          GCCATATTTGCATGATAGGGAGAAGAAAGTGTTGATGATTCTAATCCCACTTTCAAGTGT
                      ____________________________________________________________
consensus             GCCATATTTGCATGATAGGGAGAAGAAAGTGTTGATGATTCTAATCCCACTTTCAAGTGT
 
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rJMSF001E01+          TAGCAAACATTGCACAGGTTGTGATTGATGAAACCACACCCTATGGAATTGATTGGATGA
                      ____________________________________________________________
consensus             TAGCAAACATTGCACAGGTTGTGATTGATGAAACCACACCCTATGGAATTGATTGGATGA
 
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rJMSF001E01+          CTTGGAAGGAAGTGTTCTTTCTTGTCGATGTAATCTGTTGTTGTGCCGTTTTGTTCCCCA
                      ____________________________________________________________
consensus             CTTGGAAGGAAGTGTTCTTTCTTGTCGATGTAATCTGTTGTTGTGCCGTTTTGTTCCCCA
 
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rJMSF001E01+          TTGTTTGGTCCATTAAGAATCTTCGTGAGGCTGCCCGGACTGATGGGAAGGCTGCGGTGA
                      ____________________________________________________________
consensus             TTGTTTGGTCCATTAAGAATCTTCGTGAGGCTGCCCGGACTGATGGGAAGGCTGCGGTGA
 
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rJMSF001E01+          ATTTGATGAAATTGACTCTCTTTAGGCACTACTACATTGTGGTTATATGTTACATCTACT
                      ____________________________________________________________
consensus             ATTTGATGAAATTGACTCTCTTTAGGCACTACTACATTGTGGTTATATGTTACATCTACT
 
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rJMFF023H24+                                        CAATCACCTCGTATAGGTATCTGTGGANTA
rJMSF001E01+          TTACGCGGGTTGTGGTTTATGCATTAGAAACAATCACCTCGTATAGGTACCTGTGGACTA
                      ____________________________________________________________
consensus             TTACGCGGGTTGTGGTTTATGCATTAGAAACAATCACCTCGTATAGGTATCTGTGGACTA
 
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rJMFF023H24+          GTGTGGTGGCAGGGGAANTAGCGACNCTAGCGTTTTATGTGTTCACTGGGTACAAGTTCA
rJMSF001E01+          GTGTGGTGGCAGGGGAATTAGCGACACTAGCGTTTTATGTGTTCACTGGGTACAAGTTCA
                      ____________________________________________________________
consensus             GTGTGGTGGCAGGGGAATTAGCGACACTAGCGTTTTATGTGTTCACTGGGTACAAGTTCA
 
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rJMFF023H24+          ANCCCGAGGCTCACAATCCATACTTTGTGATTGACGATGAGGAGGAAGAGGCTGCCGTTG
rJMSF001E01+          AACCCGAGGCTCACAATCCATACTTTGTGATTGACGATGAGGAGGAAGAGGCTGCCGTTG
                      ____________________________________________________________
consensus             AACCCGAGGCTCACAATCCATACTTTGTGATTGACGATGAGGAGGAAGAGGCTGCCGTTG
 
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rJMFF023H24+          AGGCGTTGAAGCTTGAAGATGAGTTTGAATTGTGANCCAAACCCGAAATCCCAAGTTTGG
rJMSF001E01+          AGGCGTTGAAGCTTGAAGATGAGTTTGAATTGTGAACCAAACCCGAAATCCCAAGTTTGG
                      ____________________________________________________________
consensus             AGGCGTTGAAGCTTGAAGATGAGTTTGAATTGTGAACCAAACCCGAAATCCCAAGTTTGG
 
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rJMFF023H24+          GTACTTGGTGTGAAGTACAAATCCTGTAGTTTGGTGATCTGGAGTATATTGTGCGTGCTA
rJMSF001E01+          GTACTTGGTGTGAAGTACAAATCCTGTAGTTTGGTGATCTGGAGTATATTGTGCGTGCTA
                      ____________________________________________________________
consensus             GTACTTGGTGTGAAGTACAAATCCTGTAGTTTGGTGATCTGGAGTATATTGTGCGTGCTA
 
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rJMFF023H24+          GCTAGTGCTTCTTCGTTTGATTGTAGTCGAGAAAGATTATTCTCATGAACTAGGATAAAG
rJMSF001E01+          GCTAGTGCTTCTTCGTTTGATTGTAGTCGAGAAAGATTATTCTCATGAACTAGGATAAAG
                      ____________________________________________________________
consensus             GCTAGTGCTTCTTCGTTTGATTGTAGTCGAGAAAGATTATTCTCATGAACTAGGATAAAG
 
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rJMFF023H24+          GACTCCAATTTTTTCGTGAAAGAGAAAAGCTTGTAGGATTTTCTACCACTGTGCTAAATG
rJMSF001E01+          GACTCCAATTTTTTCGTGAAAGAGAAAAGCTTGTAGGATTTTCTACCACTGTGCTAAATG
                      ____________________________________________________________
consensus             GACTCCAATTTTTTCGTGAAAGAGAAAAGCTTGTAGGATTTTCTACCACTGTGCTAAATG
 
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rJMFF023H24+          TTATCTGACTTTCTGAACTAGGATAAAGGACTCCAATTGTTTCACTTG            
rJMSF001E01+          TTATCTGACTTTCTGAACTAGGATAAAGGACTCCAATTGTTTCACTTGTTATAAAATTTG
                      ____________________________________________________________
consensus             TTATCTGACTTTCTGAACTAGGATAAAGGACTCCAATTGTTTCACTTGTTATAAAATTTG