| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013A18 | Sequence | 615 | 004677 (7) | ref|XP_009589549.1| | 2e-73 | PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X1 [Nicotiana tomentosif | 745 | 013862 (7) | ref|XP_010650477.1| | 3e-63 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Vitis vinifera] ref| |
| JMFF013N04 | Sequence | 547 | 004677 (7) | 643 | 013862 (7) | ref|XP_011073910.1| | 5e-28 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Sesamum indicum] ref | |||
| JMFF014H05 | Sequence | 604 | 004677 (7) | ref|XP_009589549.1| | 2e-85 | PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X1 [Nicotiana tomentosif | 797 | 013862 (7) | ref|XP_010650477.1| | 1e-71 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Vitis vinifera] ref| |
| JMFF045G07 | Sequence | 626 | 004677 (7) | ref|XP_009589549.1| | 3e-97 | PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X1 [Nicotiana tomentosif | 579 | 013862 (7) | ref|XP_011073910.1| | 4e-15 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Sesamum indicum] ref |
| JMFF050L22 | Sequence | 629 | 004677 (7) | ref|XP_006349879.1| | 2e-09 | PREDICTED: PTI1-like tyrosine-protein kinase 3-like isoform X1 [Solanum tuberos | 537 | 013862 (7) | ref|XP_011073910.1| | 3e-05 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Sesamum indicum] ref |
| JMFS061F07 | Sequence | 613 | 013862 (7) | ref|XP_010650477.1| | 2e-124 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Vitis vinifera] ref| | |||||
| JMSF014E07 | Sequence | 306 | 004677 (7) | ref|XP_004252961.1| | 1e-25 | PREDICTED: PTI1-like tyrosine-protein kinase 1 isoform X1 [Solanum lycopersicum | 742 | 013862 (7) | ref|XP_010650477.1| | 8e-67 | PREDICTED: PTI1-like tyrosine-protein kinase 3 isoform X2 [Vitis vinifera] ref| |
This contig is upended
. : . : . : . : . : . :
JMFS061F07- CCTGGCCCTACGCTTG
____________________________________________________________
consensus CCTGGCCCTACGCTTG
. : . : . : . : . : . :
JMFS061F07- ACTGGACACAGCGAGTAAGGATTGCTGTTGATGCTGCAAAGGGACTTGAATATTTGCATG
____________________________________________________________
consensus ACTGGACACAGCGAGTAAGGATTGCTGTTGATGCTGCAAAGGGACTTGAATATTTGCATG
. : . : . : . : . : . :
JMFS061F07- AGAAGGTCCAACCACCTGTAATACACCGGGATATCAGATCCAGCAATGTCCTTCTGTTTG
____________________________________________________________
consensus AGAAGGTCCAACCACCTGTAATACACCGGGATATCAGATCCAGCAATGTCCTTCTGTTTG
. : . : . : . : . : . :
JMFS061F07- AAGAATTTAAAGCAAAAATTGCAGATTTTAACCTTTCAAATCAAGCTCCTGATATGGCTG
rJMFF014H05+ TCCTGATATGGCTG
____________________________________________________________
consensus AAGAATTTAAAGCAAAAATTGCAGATTTTAACCTTTCAAATCAAGCTCCTGATATGGCTG
. : . : . : . : . : . :
JMFS061F07- CCAGGCTTCATTCTACTCGAGTTCTGGGAACATTTGGTTATCATGCACCAGAGTATGCAA
rJMFF013A18+ TGGGAACATTTGGTTATCATGCACCAGAGTATGCAA
rJMSF014E07+ TCTACTCGAGTTCTGGGAACATTTGGTTATCATGCACCAGAGTATGCAA
rJMFF014H05+ CCAGGCTTCATTCTACTCGAGTTCTGGGAACATTTGGTTATCATGCACCAGAGTATGCAA
____________________________________________________________
consensus CCAGGCTTCATTCTACTCGAGTTCTGGGAACATTTGGTTATCATGCACCAGAGTATGCAA
. : . : . : . : . : . :
JMFS061F07- TGACTGGTCAGTTGACGCAGAAGAGTGATGTATATAGCTTTGGGGTGGTTTTGCTTGAAC
rJMFF013A18+ TGACTGGTCAGTTGACGCAGAAGAGTGATGTATATAGCTTTGGGGTGGTTTTGCTTGAAC
rJMSF014E07+ TGACTGGTCAGTTGACGCAGAAGAGTGATGTATATAGCTTTGGGGTGGTTTTGCTTGAAC
rJMFF014H05+ TGACTGGTCAGTTGACGCAGAAGAGTGATGTATATAGCTTTGGGGTGGTTTTGCTTGAAC
____________________________________________________________
consensus TGACTGGTCAGTTGACGCAGAAGAGTGATGTATATAGCTTTGGGGTGGTTTTGCTTGAAC
. : . : . : . : . : . :
JMFS061F07- TTTTGACTGGAAGGAAACCTGTAGACCATACCATGCCTCGTGGACAGCAGTCACTTGTGA
rJMFF013A18+ TTTTGACTGGAAGGAAACCTGTAGACCATACCATGCCTCGTGGACAGCAGTCACTTGTGA
rJMSF014E07+ TTTTGACTGGAAGGAAACCTGTAGACCATACCATGCCTCGTGGACAGCAGTCACTTGTGA
rJMFF013N04+ TCGTGGACAGCAGTCACTTGTGA
rJMFF014H05+ TTTTGACTGGAAGGAAACCTGTAGACCATACCATGCCTCGTGGACAGCAGTCACTTGTGA
____________________________________________________________
consensus TTTTGACTGGAAGGAAACCTGTAGACCATACCATGCCTCGTGGACAGCAGTCACTTGTGA
. : . : . : . : . : . :
JMFS061F07- CATGGGCCACTCCTAGGTTGAGTGAAGATAAAGTGAAACAATGTGTAGATCCAAAACTCA
rJMFF013A18+ CATGGGCCACTCCTAGGTTGAGTGAAGATAAAGTGAAACAATGTGTAGATCCAAAACTCA
rJMSF014E07+ CATGGGCCACTCCTAGGTTGAGTGAAGATAAAGTGAAACAATGTGTAGATCCAAAACTCA
rJMFF013N04+ CATGGGCCACTCCTAGGTTGAGTGAAGATAAAGTGAAACAATGTGTAGATCCAAAACTCA
rJMFF014H05+ CATGGGCCACTCCTAGGTTGAGTGAAGATAAAGTGAAACAATGTGTAGATCCAAAACTCA
rJMFF045G07+ GAAACAATGTGTAGATCCAAAACTCA
____________________________________________________________
consensus CATGGGCCACTCCTAGGTTGAGTGAAGATAAAGTGAAACAATGTGTAGATCCAAAACTCA
. : . : . : . : . : . :
JMFS061F07- AAGGAGAATATCCTCCAAAAGGATTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
rJMFF013A18+ AAGGAGAATATCCTCCAAAAGGAGTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
rJMSF014E07+ AAGGAGAATATCCTCCAAAAGGAGTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
rJMFF013N04+ AAGGAGAATATCCTCCAAAAGGAGTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
rJMFF014H05+ AATGAGAATATCCTCCAAAAGGAGTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
rJMFF045G07+ AAGGAGAATATCCTCCAAAAGGAGTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
____________________________________________________________
consensus AAGGAGAATATCCTCCAAAAGGAGTAGCAAAGCTGGCTGCTGTTGCAGCATTGTGTGTAC
. : . : . : . : . : . :
JMFS061F07- AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
rJMFF013A18+ AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
rJMSF014E07+ AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
rJMFF013N04+ AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCNTTCAGCCACTCT
rJMFF014H05+ AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
rJMFF045G07+ AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
rJMFF050L22+ ATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
____________________________________________________________
consensus AGTATGAGGCAGAGTTCCGTCCAAATATGACCATCGTTGTGAAGGCCCTTCAGCCACTCT
. : . : . : . : . : . :
JMFS061F07- TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTT
rJMFF013A18+ TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
rJMSF014E07+ TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
rJMFF013N04+ TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
rJMFF014H05+ TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
rJMFF045G07+ TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
rJMFF050L22+ TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
____________________________________________________________
consensus TGAAGTCTTCTGCCCCTGCTCCAGAATCCCCAGAAATATAATCCTAAAATACCATTTATT
. : . : . : . : . : . :
rJMFF013A18+ GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
rJMSF014E07+ GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
rJMFF013N04+ GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
rJMFF014H05+ GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
rJMFF045G07+ GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
rJMFF050L22+ GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
____________________________________________________________
consensus GCTTGGTCTGAGGGAATTTCTACAACCTATTGCACAGTTTAGTCGTTTGCAGGAGAATTG
. : . : . : . : . : . :
rJMFF013A18+ CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
rJMSF014E07+ CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
rJMFF013N04+ CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
rJMFF014H05+ CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
rJMFF045G07+ CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
rJMFF050L22+ CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
____________________________________________________________
consensus CATCTAGTATTTAAAAGTTAATATTTGTTTTCGTTTTTCTTCAAATAAGAGATTGCAGTT
. : . : . : . : . : . :
rJMFF013A18+ GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
rJMSF014E07+ GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
rJMFF013N04+ GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
rJMFF014H05+ GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
rJMFF045G07+ GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
rJMFF050L22+ GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
____________________________________________________________
consensus GCTGGTTTAATTCCTTTGGGTTCACTTTGTCGCGGTACTAGATTGTTACTGAGGTTTTCC
. : . : . : . : . : . :
rJMFF013A18+ AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
rJMSF014E07+ AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
rJMFF013N04+ AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
rJMFF014H05+ AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
rJMFF045G07+ AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
rJMFF050L22+ AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
____________________________________________________________
consensus AAGTCATTAATCAATTACGGATGAGCCGTGAGATTGGTTTGCTGTGGTTGTTTCCTTCAG
. : . : . : . : . : . :
rJMFF013A18+ TATTGACATTGTTACTGAGAACCGAGATGTTCTAAGGTATTAATCATTTATCAACGAGCT
rJMSF014E07+ TATTGACATTGTTACTGAGAACCGAGATGTTCTAAGGTATTAATCATTTATCAACGAGCT
rJMFF013N04+ TATTGACATTGTTACTGAGAACCGAGATGTTNTAAGGTATTAATCATTTATCAACGAGCT
rJMFF014H05+ TATTGACATTGTTACTGAGAACCGAGATGTTCTAAGGTATTAATCATTTATCAACGAGCT
rJMFF045G07+ TATTGACATTGTTACTGAGAACCGAGATGTTCTAAGGTATTAATCATTTATCAACGAGCT
rJMFF050L22+ TATTGACATTGTTACTGAGAACCGAGATGTTCTAAGGTATTAATCATTTATCAACGAGCT
____________________________________________________________
consensus TATTGACATTGTTACTGAGAACCGAGATGTTCTAAGGTATTAATCATTTATCAACGAGCT
. : . : . : . : . : . :
rJMFF013A18+ GTGAGAGGTGATATTCCCTTCTAGAACTCTGATGTATATTTTGTAAAAT
rJMSF014E07+ GTGAGAGGTGATATTCCCTTCTAGAACTCTGAT
rJMFF013N04+ GTGAGAGGTGATATTCCCTTCTAGAACTCTGATGTATATTTTGTAAAATTATTT
rJMFF014H05+ GTGAGAGGTGATATTCCCTTCTAGAACTCTGATGTATATTTTGTAAAATTATTT
rJMFF045G07+ GTGAGAGGTGATATTCCCTTCTAGAACTCTGATGTATATTTTGTAAAATTATTTTGAGTT
rJMFF050L22+ GTGAGAGGTGATATTCCCTTCTAGAACTCTGATGTATATTTTGTAAAATTATTTTGAGTT
____________________________________________________________
consensus GTGAGAGGTGATATTCCCTTCTAGAACTCTGATGTATATTTTGTAAAATTATTTTGAGTT
. : . : . : . : . : . :
rJMFF045G07+ TATGGATTTGG
rJMFF050L22+ TATGGATTTGGTGAAACTTTGTTTTGATGAATTTATATTTGTTGGTGTTTAAAAAAAAAT
____________________________________________________________
consensus TATGGATTTGGTGAAACTTTGTTTTGATGAATTTATATTTGTTGGTGTTTAAAAAAAAAT