Contig 013861:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF050J18-                                       ATCACCTCGCAGATTGGAGGTTGCTGAGAGAG
JMSF042M04-                                                                GAGAGAG
                      ____________________________________________________________
consensus                                         ATCACCTCGCAGATTGGAGGTTGCTGAGAGAG
 
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JMFF050J18-           AAGTAGCCGGAATGAGAATTTACCTTCCCATCCTTCTCCTCATCTCTGGTTTTCTGGCGA
JMSF042M04-           AAGTAGCCGGAATGAGAATTTACCTTCCCATCCTTCTCCTCATCTCTGGTTTTCTGGCGA
                      ____________________________________________________________
consensus             AAGTAGCCGGAATGAGAATTTACCTTCCCATCCTTCTCCTCATCTCTGGTTTTCTGGCGA
 
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JMFF050J18-           TATCTTCAGCAAACCGTAATCCCACGGCTCTCTTACCTTCTGAACCCCAACTGACCAACT
JMSF042M04-           TATCTTCAGCAAACCGTAATCCCACGGCTCTCTTACCTTCTGAACCCCAACTGACCAACT
                      ____________________________________________________________
consensus             TATCTTCAGCAAACCGTAATCCCACGGCTCTCTTACCTTCTGAACCCCAACTGACCAACT
 
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JMFF050J18-           GCCCCGCGCCCGACGGCGATCTGAATTACCGGCCGGTCATCGGGATTGTCAGCCATCCCG
JMSF042M04-           GCCCCGCGCCCGACGGCGATCTGAATTACCGGCCGGTCATCGGGATTGTCAGCCATCCCG
                      ____________________________________________________________
consensus             GCCCCGCGCCCGACGGCGATCTGAATTACCGGCCGGTCATCGGGATTGTCAGCCATCCCG
 
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JMFF050J18-           GGGACGGAGCCAAAAGCCGCTTCAGCAATGCTTCCGATGTTTCCTACATCGCTGCTTCCT
JMSF042M04-           GGGACGGAGCCAAAAGCCGCTTCAGCAATGCTTCCGATGTTTCCTACATCGCTGCTTCCT
                      ____________________________________________________________
consensus             GGGACGGAGCCAAAAGCCGCTTCAGCAATGCTTCCGATGTTTCCTACATCGCTGCTTCCT
 
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JMFF050J18-           ACGTCAAATTCGTCGAGTCTGCTGGTGCTAGGGTCATTCCTCTCATTTATAACGAGCCTC
JMSF042M04-           ACGTCAAATTCGTCGAGTCTGCTGGTGCTAGGGTCATTCCTCTCATTTATAACGAGCCTC
                      ____________________________________________________________
consensus             ACGTCAAATTCGTCGAGTCTGCTGGTGCTAGGGTCATTCCTCTCATTTATAACGAGCCTC
 
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JMFF050J18-           CTGAGATTCTCATCTAAAAACTCAATCTAGTTAACGGTGTGCTGTTCACTGGGGGATCCT
JMSF042M04-           CTGAGATTCTCATCCAAAAACTCAATCTAGTTAACGGTGTGCTGTTCACTGGGGGATCCT
                      ____________________________________________________________
consensus             CTGAGATTCTCATCTAAAAACTCAATCTAGTTAACGGTGTGCTGTTCACTGGGGGATCCT
 
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JMFF050J18-           CCAAGAAGGGTCTGTACTTTGAGGTTGTCAAGGGAATTTTCCAGAAAGTTTTGGAGAAGA
JMSF042M04-           CCAAGAAGGGTCTGTACTTTGAGGTTGTCAAGGGAATTTTCCAGAAAGTTTTGGAGAAGA
                      ____________________________________________________________
consensus             CCAAGAAGGGTCTGTACTTTGAGGTTGTCAAGGGAATTTTCCAGAAAGTTTTGGAGAAGA
 
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JMFF050J18-           ATGATGCAGGAGATCATTTCCCTCTCCTTGCCATACGCTTGGGTTTTGAACTTTTAACAA
JMSF042M04-           ATGATGCAGGAGATCATTTCCCTCTCCTTGCCATATGCTTGGGTTTTGAACTTTTAACAA
rJMSF042M04+                                                              TTTAACAA
                      ____________________________________________________________
consensus             ATGATGCAGGAGATCATTTCCCTCTCCTTGCCATATGCTTGGGTTTTGAACTTTTAACAA
 
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JMFF050J18-           TGATCATCACAAAGGACAATAACATTCTTGAGGGATTTAATGCGGCAAACCAAGCATCTA
JMSF042M04-           TGATCATCACAAAGGACAATAACATTCTTGAGGGATTTAATGCGGCAAACCAAGCATCTA
rJMSF042M04+          TGATCATCACAAAGGACAATAACATTCTTGAGGGATTTAATGCGGCAAACCAAGCATCTA
                      ____________________________________________________________
consensus             TGATCATCACAAAGGACAATAACATTCTTGAGGGATTTAATGCGGCAAACCAAGCATCTA
 
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JMFF050J18-           AGCTA                                                       
JMSF042M04-           AGCTACAATTTGTGGAGGGTGCTAATTTTGAAGGAACCCTGTTTCAGAGATTCCCTTCTG
rJMSF042M04+          AGCTACAATTTGTGGAGGGTGCTAATTTTGAAGGAACCCTGTTTCAGAGATTCCCTTCTG
                      ____________________________________________________________
consensus             AGCTACAATTTGTGGAGGGTGCTAATTTTGAAGGAACCCTGTTTCAGAGATTCCCTTCTG
 
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JMSF042M04-           AGTTGCTAAAAAAGATGAGTAAGGATTGCCTTGTCATGCAAAATCATCATTATGGCATTT
rJMSF042M04+          AGTTGCTAAAAAAGATGAGTAAGGATTGCCTTGTCATGCAAAATCATCATTATGGCATTT
rJMFF050J18+                                                    ATCATCATTATGGCATTT
                      ____________________________________________________________
consensus             AGTTGCTAAAAAAGATGAGTAAGGATTGCCTTGTCATGCAAAATCATCATTATGGCATTT
 
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JMSF042M04-           CACCTGAAAAATTCCGAGCGAATGCAGACTTGTGTAACTTCTTCAAGATTTTGACAACAA
rJMSF042M04+          CACCTGAAAAATTCCGAGCGAATGCAGACTTGTGTAACTTCTTCAAGATTTTGACAACAA
rJMFF050J18+          CACCTGAAAAATTCCGAGCGAATGCAGACTTGTGTAACTTCTTCAAGATTTTGACAACAA
                      ____________________________________________________________
consensus             CACCTGAAAAATTCCGAGCGAATGCAGACTTGTGTAACTTCTTCAAGATTTTGACAACAA
 
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JMSF042M04-           GTGCTGATCAAG                                                
rJMSF042M04+          GTGCTGATCAAGACAACAAGATCTATGTCTCCACAGTTCAAGCAGAGCACTACCCCGTAA
rJMFF050J18+          GTGCTGATCAAGACAACAAGATCTATGTCTCCACAGTTCAAGCAGAGCACTACCCCGTAA
                      ____________________________________________________________
consensus             GTGCTGATCAAGACAACAAGATCTATGTCTCCACAGTTCAAGCAGAGCACTACCCCGTAA
 
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rJMSF042M04+          CTGCTGTACAATGGCACCCAGAGAAAAATGC-TTTGAATGGGGCTTATCTGAGATTCCAC
rJMFF050J18+          CTGCTGTACAATGGCACCCAGAGAAAAATGCTTTTGAATGGGGCTTATCTGAGATTCCAC
                      ____________________________________________________________
consensus             CTGCTGTACAATGGCACCCAGAGAAAAATGCTTTTGAATGGGGCTTATCTGAGATTCCAC
 
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rJMSF042M04+          ACACTGAAGATGCAATTCTAGTGACTCAAAATGTTGCCAACTACTTTATCAGTGAAGCTA
rJMFF050J18+          ACACTGAAGATGCAATTCTAGTGACTCAAAATGTTGCCAACTACTTTATCAGTGAAGCTA
                      ____________________________________________________________
consensus             ACACTGAAGATGCAATTCTAGTGACTCAAAATGTTGCCAACTACTTTATCAGTGAAGCTA
 
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rJMSF042M04+          GGAAATCTTTAAACAGGCCAGATGCTCAAGAAGTGCTTAACAACCTTATTTACAACTATA
rJMFF050J18+          GGAAATCTTTAAACAGGCCAGATGCTCAAGAAGTGCTTAACAACCTTATTTACAACTATA
                      ____________________________________________________________
consensus             GGAAATCTTTAAACAGGCCAGATGCTCAAGAAGTGCTTAACAACCTTATTTACAACTATA
 
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rJMSF042M04+          GTCCCTCTTATAGTGGGAAGTCTGGGAGCGGTTTTGATGAGGTTTACATCTTCACTCAGA
rJMFF050J18+          GTCCCTCTTATAGTGGGAAGTCTGGGAGCGGTTTTGATGAGGTTTACATCTTCACTCAGA
                      ____________________________________________________________
consensus             GTCCCTCTTATAGTGGGAAGTCTGGGAGCGGTTTTGATGAGGTTTACATCTTCACTCAGA
 
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rJMSF042M04+          ATTCTGGTCTGAGTTCTCTGTAGATACAGGTCTAGTGTATAATGTATATGAACATGACTA
rJMFF050J18+          ATTCTGGTCTGAGTTCTCTGTAGATACAGGTCTAGTGTATAATGTATATGAACATGACTA
                      ____________________________________________________________
consensus             ATTCTGGTCTGAGTTCTCTGTAGATACAGGTCTAGTGTATAATGTATATGAACATGACTA
 
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rJMSF042M04+          TATGATTGTGAGAATTCTCTGTAATTATGTGTATAATATCATATCTGTGTTATTGCTAGC
rJMFF050J18+          TATGATTGTGAGAATTCTCTGTAATTATGTGTATAATATCATATCTGTGTTATTGCTAGC
                      ____________________________________________________________
consensus             TATGATTGTGAGAATTCTCTGTAATTATGTGTATAATATCATATCTGTGTTATTGCTAGC
 
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rJMSF042M04+          TATGTGAGAACCT                                               
rJMFF050J18+          TATGTGAGAACCTTTGACATTTTCATTGGTGAAAGATTGTTTAATTTCTCTGAATTTGAC
                      ____________________________________________________________
consensus             TATGTGAGAACCTTTGACATTTTCATTGGTGAAAGATTGTTTAATTTCTCTGAATTTGAC