| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009K15 | Sequence | 580 | 001653 (10) | ref|XP_011091261.1| | 2e-75 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum] | 726 | 013850 (9) | |||
| JMFF014C05 | Sequence | 585 | 001653 (10) | ref|XP_004247759.1| | 4e-61 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Solanum lycopersicum] | 489 | 013850 (9) | |||
| JMFF015M14 | Sequence | 583 | 001653 (10) | ref|XP_011091261.1| | 2e-74 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum] | 701 | 013850 (9) | |||
| JMFF018I11 | Sequence | 586 | 001653 (10) | ref|XP_011091261.1| | 2e-75 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum] | 722 | 013850 (9) | |||
| JMFF019A16 | Sequence | 583 | 001653 (10) | ref|XP_011091261.1| | 2e-74 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum] | 640 | 013850 (9) | |||
| JMFF031L06 | Sequence | 605 | 001653 (10) | ref|XP_011091261.1| | 4e-80 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum] | 655 | 013850 (9) | |||
| JMFF031N15 | Sequence | 195 | 001653 (10) | 725 | 013850 (9) | ||||||
| JMFF049J21 | Sequence | 629 | 001653 (10) | ref|XP_011091261.1| | 5e-87 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Sesamum indicum] | 625 | 013850 (9) | |||
| JMSF028O24 | Sequence | 667 | 001653 (10) | ref|XP_011091262.1| | 2e-96 | PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform X1 [Sesamum i | 667 | 013850 (9) | |||
This contig is upended
. : . : . : . : . : . :
rJMFF018I11+ T
rJMFF009K15+ TCNT
____________________________________________________________
consensus TCNT
. : . : . : . : . : . :
rJMFF018I11+ AATGTTGGAGGTGGAGGACNTACGGGTCAGTCTCCAACTGAAGCTGCAGGTTATGGGAA-
rJMFF009K15+ AATGTTGGAGGTGGAGGACCTACGGGTCAGTCTCCAACTGAAGCTGCAGGTTATGGGAAC
rJMFF031N15+ GAGGTGGAGGACCTACGGGTCAGTCTCCAACTGAAGCTGCAGGTTATGGGAA-
rJMSF028O24+ AAGCTGCAGGTTATGGGAA-
rJMFF015M14+ CTCCAACTGAAGCTGCAGGTTATGGGAA-
____________________________________________________________
consensus AATGTTGGAGGTGGAGGACCTACGGGTCAGTCTCCAACTGAAGCTGCAGGTTATGGGAA-
. : . : . : . : . : . :
rJMFF018I11+ CCAAGGTTATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGG-AAATCCAGCTG
rJMFF031L06+ TATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGGAAAATCCAGCNG
rJMFF019A16+ GGAAATGATGGATCTTATGG-AAATCCAGCTG
rJMFF009K15+ CCAAGGTTATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGG-AAATCCAGCTG
rJMFF031N15+ CCAAGGTTATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGG-AAATCCAGCTG
rJMSF028O24+ CCAAGGTTATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGG-AAATCCAGCTG
rJMFF015M14+ CCAAGGTTATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGG-AAATCCAGCTG
____________________________________________________________
consensus CCAAGGTTATGGTTATGGTGGCTATGGTGGAAATGATGGATCTTATGG-AAATCCAGCTG
. : . : . : . : . : . :
rJMFF018I11+ CTTAT-GGGGCTGTAGGACGTTCTGCTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
rJMFF031L06+ CTTAT-GGGGCNGTAGGACGTTCTGNTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
rJMFF019A16+ CNTATGGGGGCTGTAGGACGTTCTGCTGGTGNTCCAAGGTAGCAATTCCCCCTGCCTGGT
rJMFF014C05+ CTGGT
rJMFF009K15+ CTTAT-GGGGCTGTAGGACGTTCTGCTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
rJMFF031N15+ CTTAT-GGGGCTGTAGGACGTTCTGCTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
rJMSF028O24+ CTTAT-GGGGCTGTAGGACGTTCTGCTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
rJMFF015M14+ CTTAT-GGGGCTGTAGGACGTTCTGCTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
rJMFF049J21+ TCCAA-GTAGCAATTCCCCT--GCTGGT
____________________________________________________________
consensus CTTAT-GGGGCTGTAGGACGTTCTGCTGGTGGTCCAA-GTAGCAATTCCCCT--GCTGGT
. : . : . : . : . : . :
rJMFF018I11+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMFF031L06+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMFF019A16+ GGTGGTGGTACAGGAGAGCTGCAAGCTGNTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMFF014C05+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGNTATGGGGCGTATGGNNATGCC
rJMFF009K15+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMFF031N15+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMSF028O24+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMFF015M14+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
rJMFF049J21+ GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
____________________________________________________________
consensus GGTGGTGGTACAGGAGAGCTGCAAGCTGGTGCTGGTGGTTATGGGGCGTATGGTGATGCC
. : . : . : . : . : . :
rJMFF018I11+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGA
rJMFF031L06+ AGTNGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGNTGCATCACAGCCTTCTGGG
rJMFF019A16+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGG
rJMFF014C05+ AGNNGAAATTNTGGATANGGAAATGCAGGATGGAGGTNNGATGCATCNCANCCTTCTGGG
rJMFF009K15+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGG
rJMFF031N15+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGG
rJMSF028O24+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGG
rJMFF015M14+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGG
rJMFF049J21+ AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGA
____________________________________________________________
consensus AGTGGAAATTCTGGATATGGAAATGCAGGATGGAGGTCTGATGCATCACAGCCTTCTGGG
. : . : . : . : . : . :
rJMFF018I11+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF031L06+ AATTATGGATCAAATGGCAGCCAAGNTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF019A16+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF014C05+ AATTATGGATCAAATGGCAGCCAANNTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF009K15+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF031N15+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMSF028O24+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF015M14+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
rJMFF049J21+ AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
____________________________________________________________
consensus AATTATGGATCAAATGGCAGCCAAGTTAGCTATGGAGGTGGATATGGTGGTGCGCCAGGT
. : . : . : . : . : . :
rJMFF018I11+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMFF031L06+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMFF019A16+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMFF014C05+ CGGCAAACTCAACAACAGTGATCNCAAACACAATCTCATGCAANTCATTTATTTTCTGGA
rJMFF009K15+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMFF031N15+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMSF028O24+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMFF015M14+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
rJMFF049J21+ CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
____________________________________________________________
consensus CGGCAAACTCAACAACAGTGATCACAAACACAATCTCATGCAACTCATTTATTTTCTGGA
. : . : . : . : . : . :
rJMFF018I11+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMFF031L06+ AGTNTANTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMFF019A16+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMFF014C05+ AGTNTANTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATN
rJMFF009K15+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMFF031N15+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMSF028O24+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMFF015M14+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
rJMFF049J21+ AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
____________________________________________________________
consensus AGTCTACTCATCATCGATCTTGTGTTTCATGAGCTGAGAGGGAGGGAGGCTGTTTCAATA
. : . : . : . : . : . :
rJMFF018I11+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMFF031L06+ CATCATNCNTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMFF019A16+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMFF014C05+ CATCATNCNTGCGTAATGGGNNTGGTTGGATTGCTTGAATCCCAGTAGTTNGTTATTNTN
rJMFF009K15+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMFF031N15+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMSF028O24+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMFF015M14+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
rJMFF049J21+ CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
____________________________________________________________
consensus CATCATACCTGCGTAATGGGACTGGTTGGATTGCTTGAATCCCAGTAGTTTGTTATTCTA
. : . : . : . : . : . :
rJMFF018I11+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
rJMFF031L06+ CAATAAGTAGCATTATACAGTNGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTANTA
rJMFF019A16+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
rJMFF014C05+ CAATAAGTAGCATTNTACAGTNGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTNNTA
rJMFF009K15+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
rJMFF031N15+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
rJMSF028O24+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
rJMFF015M14+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
rJMFF049J21+ CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
____________________________________________________________
consensus CAATAAGTAGCATTATACAGTAGACGTAACTTATTATTTGCTGTTTAAGTGTAGTTTTTA
. : . : . : . : . : . :
rJMFF018I11+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMFF031L06+ TTTTGGAAATNNGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMFF019A16+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMFF014C05+ TTTTGGAAATNNGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTNGGTGCAT
rJMFF009K15+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMFF031N15+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMSF028O24+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMFF015M14+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
rJMFF049J21+ TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
____________________________________________________________
consensus TTTTGGAAATTTGGCGTGCTTATTATTATTATTATCTCTTCCTTGGCTAATTTGGTGCAT
. : . : . : . : . : . :
rJMFF018I11+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
rJMFF031L06+ GNCTTCTCTCAGTCTGCACTGATATAGNTNGTGCTGAACTNATGTCTGCNTGATTTCTGC
rJMFF019A16+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
rJMFF014C05+ GG
rJMFF009K15+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
rJMFF031N15+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
rJMSF028O24+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCT
rJMFF015M14+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
rJMFF049J21+ GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
____________________________________________________________
consensus GGCTTCTCTCAGTCTGCACTGATATAGTTTGTGCTGAACTTATGTCTGCTTGATTTCTGC
. : . : . : . : . : . :
rJMFF018I11+ AAGTCCT
rJMFF031L06+ AAGTCC
rJMFF019A16+ AAGTC
rJMFF009K15+ AAGTCCT
rJMFF031N15+ AAGTCCTTTGGTAA
rJMFF015M14+ AAGTCCTTTGGTAA
rJMFF049J21+ AAGTCCTTTGGTAATGAAGTTAGTATTGACAGCAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AAGTCCTTTGGTAATGAAGTTAGTATTGACAGCAAAAAAAAAAAAAAAACTCTCCAGGGT