Contig 013848:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049I08Sequence597018489ref|XP_009603130.1|168PREDICTED: probable WRKY transcription factor 3 [Nicotiana tomentosiformis]563013848 (2)ref|XP_009625923.1|1e-30PREDICTED: probable WRKY transcription factor 58, partial [Nicotiana tomentosif
JMSF029N13Sequence634018946ref|XP_009603130.1|170PREDICTED: probable WRKY transcription factor 3 [Nicotiana tomentosiformis]770013848 (2)gb|AFJ54352.1|1e-54WRKY transcription factor [Camellia sinensis]

Alignment

This contig is upended


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rJMSF029N13+                                             TCCCGAGAAAAGNCTCAAAGTGGTT
                      ____________________________________________________________
consensus                                                TCCCGAGAAAAGNCTCAAAGTGGTT
 
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rJMSF029N13+          CTCGTAGCTGGACTGAAACGAACAGGTCAAATAAGGTGGTATGTTCTCAACCAGAGACTG
                      ____________________________________________________________
consensus             CTCGTAGCTGGACTGAAACGAACAGGTCAAATAAGGTGGTATGTTCTCAACCAGAGACTG
 
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rJMSF029N13+          TATCCACCAAACTGCGGTCTGAACAACTTTCGGTCGCATCTAAACGCAATGAAATGGAGG
                      ____________________________________________________________
consensus             TATCCACCAAACTGCGGTCTGAACAACTTTCGGTCGCATCTAAACGCAATGAAATGGAGG
 
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rJMSF029N13+          AAACCGCAACAGTATTAGATGAAAAGGATGACGGGGAACCAAATGCAGAGAGACGGATTT
                      ____________________________________________________________
consensus             AAACCGCAACAGTATTAGATGAAAAGGATGACGGGGAACCAAATGCAGAGAGACGGATTT
 
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rJMSF029N13+          CAGAGGCTGGCTCATCTCACAAGACCGTCATGGAACCCAAAATCATTGTGCAGACAAGAA
rJMFF049I08+                                              CCAAAATCATTGTGCAGCCAAGAA
                      ____________________________________________________________
consensus             CAGAGGCTGGCTCATCTCACAAGACCGTCATGGAACCCAAAATCATTGTGCAGCCAAGAA
 
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rJMSF029N13+          GCGAAGTTGACCTTTTGGACGATGGTTACAAGTGGCGGAAGTATGGACAAAAAGTGGTGA
rJMFF049I08+          GCGAATTTGCCCTTTT-GACGATGGTTTCAAGTGGCGGAAGTATGGACAAAAAGTGGTGA
                      ____________________________________________________________
consensus             GCGAATTTGCCCTTTTGGACGATGGTTTCAAGTGGCGGAAGTATGGACAAAAAGTGGTGA
 
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rJMSF029N13+          AGGGGAATGCTAATCCAAGGAGTTACTATCGGTGTACATACAAAGGATGCAATGTCCGAA
rJMFF049I08+          AGGGGAATGTTAATCCAAGGAGTTACTATCGGTGTACATACAAAGGATGCAATGTCCGAA
                      ____________________________________________________________
consensus             AGGGGAATGTTAATCCAAGGAGTTACTATCGGTGTACATACAAAGGATGCAATGTCCGAA
 
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rJMSF029N13+          AACACGTCGAAAGGGCTTCAGCAGATCCAAAAGCGGTTATAACCACATACGAAGGCAAAC
rJMFF049I08+          AACACGTGGAAAGGGGTTCAGCAGATCCAAAAGCGGTTATAACCACATAGGAAGGCAAAC
                      ____________________________________________________________
consensus             AACACGTGGAAAGGGGTTCAGCAGATCCAAAAGCGGTTATAACCACATAGGAAGGCAAAC
 
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rJMSF029N13+          ATAATCACGATACCCCAAACGCACCAAACAACAATCATAGCGTAACTAATAAGAGCAGCA
rJMFF049I08+          ATAATCGCGATACCCCAAAGGCACCAAACAACAATCATAGGGTAATTAATAAGAGCAGCA
                      ____________________________________________________________
consensus             ATAATCGCGATACCCCAAAGGCACCAAACAACAATCATAGGGTAATTAATAAGAGCAGCA
 
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rJMSF029N13+          TTCAAAAGTTGGTAGCCGCGTAGCTGGGAACAGAGATCTGAAAGAGCAAATTGCAGAAGA
rJMFF049I08+          TTCAAAAGTTGGTACCCGCGTAGCTGGGAACAGAGATTTGAAAGAGCAAATTGCAGAAGA
                      ____________________________________________________________
consensus             TTCAAAAGTTGGTAGCCGCGTAGCTGGGAACAGAGATTTGAAAGAGCAAATTGCAGAAGA
 
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rJMSF029N13+          GAATCCCATACAGTATCTCAGTAGAGGCAAAAGCACTTGCTTTATTACATCTCTTGTGAA
rJMFF049I08+          GAATCCCATCCAGTATCTCAGTAGAGGCAAAAGCACTTGCTTTATTACATCTCTTGTGAA
                      ____________________________________________________________
consensus             GAATCCCATCCAGTATCTCAGTAGAGGCAAAAGCACTTGCTTTATTACATCTCTTGTGAA
 
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rJMSF029N13+          CTTCACTTTTTCTCTTCTTTTTGTACAGAAGAATTCCTCTTTAGACAGATCAGATTTGTA
rJMFF049I08+          CTTCACTTTTTCTCTTCTTTTTGTACAGAAGAATTCCTTTTTAGACAGATCAGATTTGTA
                      ____________________________________________________________
consensus             CTTCACTTTTTCTCTTCTTTTTGTACAGAAGAATTCCTTTTTAGACAGATCAGATTTGTA
 
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rJMSF029N13+          AAATGTTCCCTTTAACTTGTACACTTTTGCCTTTGTTCCTTTCTGCCAATATGAACAGTA
rJMFF049I08+          AAATGTTCCCTTTAACTTGTACACTTTTGCCTTTGTTCGTTTCTGCCAATAGTAACAGTA
                      ____________________________________________________________
consensus             AAATGTTCCCTTTAACTTGTACACTTTTGCCTTTGTTCGTTTCTGCCAATATTAACAGTA
 
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rJMSF029N13+          ATCACTGATCATCTGTAAGCTT                                      
rJMFF049I08+          ATCACTGATCATCTGTAAGCTTTAAACTATTAGCATATGAATGTATATTTGAAAAGCTTC
                      ____________________________________________________________
consensus             ATCACTGATCATCTGTAAGCTTTAAACTATTAGCATATGAATGTATATTTGAAAAGCTTC