clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF010G24 | Sequence | 520 | 002264 (5) | ref|XP_009609922.1| | 6e-37 | PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial [Nicotiana | 814 | 013847 (4) | ref|XP_011077001.1| | 2e-93 | PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial [Sesamum in |
JMFF049H20 | Sequence | 609 | 002264 (5) | gb|EYU39584.1| | 1e-55 | hypothetical protein MIMGU_mgv1a005793mg [Erythranthe guttata] | 554 | 013847 (4) | ref|XP_011039360.1| | 1e-40 | PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform X1 |
JMSF018D22 | Sequence | 243 | 002264 (5) | 772 | 013847 (4) | ref|XP_011077001.1| | 1e-111 | PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial [Sesamum in | |||
JMSF026E19 | Sequence | 636 | 002264 (5) | ref|XP_004304064.1| | 4e-52 | PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial [Fragaria v | 758 | 013847 (4) | ref|XP_011077001.1| | 3e-102 | PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial [Sesamum in |
This contig is upended
. : . : . : . : . : . :
rJMFF010G24+ GGGACT
____________________________________________________________
consensus GGGACT
. : . : . : . : . : . :
rJMSF018D22+ AAGAGCATTGACTACC
rJMFF010G24+ GAAGCCAGCATTGATGCTTTATCTATTGCGGGGTTTNGTAGGTCAAGAGCATTGACTACC
____________________________________________________________
consensus GAAGCCAGCATTGATGCTTTATCTATTGCGGGGTTTNGTAGGTCAAGAGCATTGACTACC
. : . : . : . : . : . :
rJMSF018D22+ AAGTATAATGCTGCACCACAAGAAGCTTCAAGGCCATTTGATTGCGATCGTGATGGATTT
rJMFF010G24+ AAGTATAATGCTGCACCACAAGAAGCTTCAAGGCCATTTGATTGCGATCGTGATGGATTT
rJMSF026E19+ AGCTTCAAGGCCATTNGATTGTGACCGTGATGGATTT
____________________________________________________________
consensus AAGTATAATGCTGCACCACAAGAAGCTTCAAGGCCATTTGATTGCGATCGTGATGGATTT
. : . : . : . : . : . :
rJMSF018D22+ GTCATTGGTGAAGGTTCTGGTATTTTAGTATTGGAGGAATTGGAGCATGCAAAAACACGA
rJMFF010G24+ GTCATTGGTGAAGGTTCTGGTATTTTAGTATTGGAGGAATTGGAGCATGCAAAAACACGA
rJMSF026E19+ GTCATTGGTGAGGGTTGTGGTATTCTTGTGTTAGAGGAATTAGAGCACGCTAAAAAGCGA
____________________________________________________________
consensus GTCATTGGTGAAGGTTCTGGTATTTTAGTATTGGAGGAATTGGAGCATGCAAAAACACGA
. : . : . : . : . : . :
rJMSF018D22+ GGGGCTAAGATATATGCTGAGGTTCGTGGCTATGGAACCTCAGGCGATGCATATCACATT
rJMFF010G24+ GGGGCTAAGATATATGCTGAGGTTCGTGGCTATGGAACCTCAGGCGATGCATATCACATT
rJMSF026E19+ GGTGCTAAGATATATGCTGAGCTTCGTGGTTTTGGATCCTCGGGTGATGCATATCACATC
____________________________________________________________
consensus GGGGCTAAGATATATGCTGAGGTTCGTGGCTATGGAACCTCAGGCGATGCATATCACATT
. : . : . : . : . : . :
rJMSF018D22+ ACTCAACCACATCTTAGTGGAAGAGGTGCTATTCTGGCCATGACACGTGCTCTAAAGCAG
rJMFF010G24+ ACTCAACCACATCTTAGTGGAAGAGGTGCTATTCTGGCCATGACACGTGCTCTAAAGCAG
rJMSF026E19+ ACTCAGCCGCATTTTGGTGGAAGAGGTGCTATTTTGGCCATGACACGTGCTCTAAAGCAG
rJMFF049H20+ CGTGCTCTAAAGCAG
____________________________________________________________
consensus ACTCAACCACATCTTAGTGGAAGAGGTGCTATTCTGGCCATGACACGTGCTCTAAAGCAG
. : . : . : . : . : . :
rJMSF018D22+ TCTGGTCTCCATCCTAATCAAGTGGGTTACATAAACGCACACGCAACGTCTACACCTTTG
rJMFF010G24+ TCTGGTCTCCATCCTAATCAAGTGGGTTACATAAACGCACACGCAACGTCTACACCTTTG
rJMSF026E19+ TCTGGTCTTCATCCTAGCCAAGTGGATTACATAAATGCACATGCAACATCCACACTTTTG
rJMFF049H20+ TCTGGTCTCCATCCTAATCAAGTGGGTTACATAAACGCACACGCAACGTCTACACCTTTG
____________________________________________________________
consensus TCTGGTCTCCATCCTAATCAAGTGGGTTACATAAACGCACACGCAACGTCTACACCTTTG
. : . : . : . : . : . :
rJMSF018D22+ GGTGATGCTGTGGAAGCTACTGCAATAAAACATGTATTTTCGGATCATGCAATGTCTGGT
rJMFF010G24+ GGTGATGCTGTGGAAGCTACTGCAA-TAAACATGTATTTTCGGATCATGCAATGTCTGGT
rJMSF026E19+ GGTGATGTTGTGGAAGCTAATGCGATTCAACATGTATTTTCAGATCATGCAGCTTCAGGT
rJMFF049H20+ GGTGATGCTGTGGAAGCTACTGCAA-TAAACATGTATTTTCGGATCATGCAATGTCTGGT
____________________________________________________________
consensus GGTGATGCTGTGGAAGCTACTGCAATTAAACATGTATTTTCGGATCATGCAATGTCTGGT
. : . : . : . : . : . :
rJMSF018D22+ GCTCTGGCCTTCTCCTCGACAAAGGGTGCGATTGGCCATCTACTCGGGGCAGCTGGAGCT
rJMFF010G24+ GCTCTGGCCTTCTCCTCGACAAAGGGTGCGATTGGCCATCTACTCGGGGCAGCTGGAGCT
rJMSF026E19+ GCTCTGGCCTTTTCCTCGACGAAGGGCGCAACTGGCCATCTCCTTGGAGCAGCCGGAGCC
rJMFF049H20+ GCTCTGGCCTTCTCCTCGACAAAGGGTGCGATTGGCCATCTACTCGGGGCAGCTGGAGCT
____________________________________________________________
consensus GCTCTGGCCTTCTCCTCGACAAAGGGTGCGATTGGCCATCTACTCGGGGCAGCTGGAGCT
. : . : . : . : . : . :
rJMSF018D22+ GTAGAAGCTATTTTTGCTATACTAGCACTACGCCATGGAATGGCGCCTTTGACGCTAAAC
rJMFF010G24+ GTAGAAGCTATTTTTGCTATACTAGCACTACGCCATGGAATGGCGCCTTTGACGCTAAAC
rJMSF026E19+ GTAGAAGCTATTTTTGCTGTGTTGACGATACACCATGGAATCGCGCCTTTGACGCTTAAC
rJMFF049H20+ GTAGAAGCTATTTTTGCTATACTAGCACTACGCCATGGAATGGCGCCTTTGACGCTAAAC
____________________________________________________________
consensus GTAGAAGCTATTTTTGCTATACTAGCACTACGCCATGGAATGGCGCCTTTGACGCTAAAC
. : . : . : . : . : . :
rJMSF018D22+ CTTAAAAAACCAGATCCCATATTTACTGGTGATTTCACGCCATTGACAGCGTCGAAGCAG
rJMFF010G24+ CTTAAAAAACCAGATCCCATATTTACTGGTGATTTCACGCCATTGACAGCGTCGAAGCAG
rJMSF026E19+ CTTAAAAAACCTGATCCCGTATTTGCTGGTGAGTTCATGCCATTGACAACATCAAAGGAT
rJMFF049H20+ CTTAAAAAACCAGATCCCATATTTACTGGTGATTTCACGCCATTGACAGCGTCGAAGCAG
____________________________________________________________
consensus CTTAAAAAACCAGATCCCATATTTACTGGTGATTTCACGCCATTGACAGCGTCGAAGCAG
. : . : . : . : . : . :
rJMSF018D22+ ATAGATGCTAAGGTTGCTCTATCGAACTCGTTTGGCTTTGGAGGAACAAATGCAACTTTG
rJMFF010G24+ ATAGATGCTAAGGTTGCTCTATCGAACTCGTTTGGCTTTGGAGGAACAAATGCAACTTTG
rJMSF026E19+ ATGAATGTTAAGGCTGCTTTGTCCAACTCTTTTGGCTTTGGGGGAACAAATTCAACTTTG
rJMFF049H20+ ATAGATGCTAAGGTTGCTCTATCGAACTCGTTTGGCTTTGGAGGAACAAATGCAACTTTG
____________________________________________________________
consensus ATAGATGCTAAGGTTGCTCTATCGAACTCGTTTGGCTTTGGAGGAACAAATGCAACTTTG
. : . : . : . : . : . :
rJMSF018D22+ CTTTTTGCTTCCATCAACTAATCGTTGAGTTAGGAGTT
rJMFF010G24+ CTTTTTGCTTCCATCAACTAATCGTTGAGTTAGGAGTT
rJMSF026E19+ CTTTTTGCTTCCATCAACTAATCCTTGAATTAGGAGTT
rJMFF049H20+ CTTTTTGCTTCCATCAACTAATCGTTGAGTTAGGAGTTTTGCTGGAAAATACATGTACTC
____________________________________________________________
consensus CTTTTTGCTTCCATCAACTAATCGTTGAGTTAGGAGTTTTGCTGGAAAATACATGTACTC
. : . : . : . : . : . :
rJMFF049H20+ CTTATTTTTACTCCCAACTTCTTACTTAGTGCATAGTTAAAACGAGAGACTTCCTAACTT
____________________________________________________________
consensus CTTATTTTTACTCCCAACTTCTTACTTAGTGCATAGTTAAAACGAGAGACTTCCTAACTT
. : . : . : . : . : . :
rJMFF049H20+ GAGAATCAACTACTCAATAATCGTCACTTTAATTCTTTAAATAAGATATGTCTTTGTTTG
____________________________________________________________
consensus GAGAATCAACTACTCAATAATCGTCACTTTAATTCTTTAAATAAGATATGTCTTTGTTTG