Contig 013840:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035K11Sequence571000270 (3)ref|XP_009791154.1|5e-70PREDICTED: serine/threonine-protein phosphatase 7 [Nicotiana sylvestris]591013840 (5)ref|XP_009359640.1|8e-54PREDICTED: serine/threonine-protein phosphatase 7-like [Pyrus x bretschneideri]
JMFF041G07Sequence550013840 (5)emb|CBI37500.3|4e-27unnamed protein product [Vitis vinifera]561013840 (5)emb|CBI37500.3|1e-29unnamed protein product [Vitis vinifera]
JMFF048C20Sequence397000270 (3)273013840 (5)
JMFF048M20Sequence364000270 (3)310013840 (5)

Alignment

This contig is upended


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rJMFF035K11+                                    TGGGGTCCAGATATGACAGACGAATTTCTTAAGG
                      ____________________________________________________________
consensus                                       TGGGGTCCAGATATGACAGACGAATTTCTTAAGG
 
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rJMFF035K11+          AAGTGCAACCTAAAGTTGATCATCAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGCGG
                      ____________________________________________________________
consensus             AAGTGCAACCTAAAGTTGATCATCAGGTCACATGAAGGTCCAGATGCAAGGGAAAAGCGG
 
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rJMFF035K11+          CCTGGTCTCGGAGGAATGGATGCAGGGTACACTATAGATCATGTCGTGGAATCTGGGAAA
rJMFF041G07+                                                                   AAA
                      ____________________________________________________________
consensus             CCTGGTCTCGGAGGAATGGATGCAGGGTACACTATAGATCATGTCGTGGAATCTGGGAAA
 
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rJMFF035K11+          TTGATCACATTGTTTAGTGCGCCAGACTATCCGCAGTTTCAGGCTACGGAAGATAGGTAC
JMFF041G07-                   ATTGTTTAGTGCGCCAGACTATCCGCAGTTTCAGGCTACGGAAGATAGGTAC
rJMFF041G07+          TTGATCACATTGTTTAGTGCGCCAGACTATCCGCAGTTTCAGGCTACGGAAGATAGGTAC
                      ____________________________________________________________
consensus             TTGATCACATTGTTTAGTGCGCCAGACTATCCGCAGTTTCAGGCTACGGAAGATAGGTAC
 
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rJMFF035K11+          CGAAATAAAGGAGCATACATCGTATTGGAACCTCCTGATTTCGACACTCCCATTTTCCAT
JMFF041G07-           CGAAATAAAGGAGCATACATCGTATTGGAACCTCCTGATTTCGACACTCCCATTTTCCAT
rJMFF041G07+          CGAAATAAAGGAGCATACATCGTATTGGAACCTCCTGATTTCGACACTCCCATTTTCCAT
                      ____________________________________________________________
consensus             CGAAATAAAGGAGCATACATCGTATTGGAACCTCCTGATTTCGACACTCCCATTTTCCAT
 
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rJMFF035K11+          AGCTTNGATGCAGTTACTCCCAGACCAAAGGCAAATCCATTNTATGATTTTGAAGATGTC
JMFF041G07-           AGCTTTGATGCAGTTACTCCCAGACCAAAGGCAAATCCATTCTATGATTTTGAAGATGTC
rJMFF041G07+          AGCTTTGATGCAGTTACTCCCAGACCAAAGGCAAATCCATTCTATGATTTTGAAGATGTC
                      ____________________________________________________________
consensus             AGCTTTGATGCAGTTACTCCCAGACCAAAGGCAAATCCATTCTATGATTTTGAAGATGTC
 
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rJMFF035K11+          ANTGATTNTGATGAAGAGTTGGATTNGGCATCTATGGTCACATCATGATGATGGTGTCTC
JMFF041G07-           A----TTCTGATGAAGAGTTGGATTTGGCATCTATGGTCACATCATGATGATGGTGTCTC
rJMFF041G07+          A----TTCTGATGAAGAGTTGGATTTGGCATCTATGGTCACATCATGATGATGGTGTCTC
                      ____________________________________________________________
consensus             A----TTCTGATGAAGAGTTGGATTTGGCATCTATGGTCACATCATGATGATGGTGTCTC
 
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rJMFF035K11+          GAGGCCATTGTATAAAAACAGAAGATTTGAAGGCATAACAACAATAGTTCCAGNTGGTTG
JMFF041G07-           GAGGCCATTGTATAAAAACAGAAGATTTGAAGGCATAACAACAATAGTTCCAGCTGGTTG
rJMFF048M20+                   GTATAAAAACAGAAGATTTGAAGGCATAACAACAATAGTTCCAGCTGGTTG
rJMFF041G07+          GAGGCCATTGTATAAAAACAGAAGATTTGAAGGCATAACAACAATAGTTCCAGCTGGTTG
                      ____________________________________________________________
consensus             GAGGCCATTGTATAAAAACAGAAGATTTGAAGGCATAACAACAATAGTTCCAGCTGGTTG
 
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rJMFF035K11+          AGGATGATAGGAACTTGNTTAACTTCAATCCAATGGCGATTTAGGCTCGAAATGGAGTTT
JMFF041G07-           AGGATGATAGGAACTTGGTTAACTTCAATCCAATGGCGATTTAGGCTCGAAATGGAGTTT
rJMFF048M20+          AGGATGATAGGAACTTGGTTAACTTCAATCCAATGGCGATTTAGGCTCGAAATGGAGTTT
rJMFF041G07+          AGGATGATAGGAACTTGGTTAACTTCAATCCAATGGCGATTTAGGCTCGAAATGGAGTTT
rJMFF048C20+                                     ATCCAATGGCGATTTAGGCTCGAAATGGAGTTT
                      ____________________________________________________________
consensus             AGGATGATAGGAACTTGGTTAACTTCAATCCAATGGCGATTTAGGCTCGAAATGGAGTTT
 
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rJMFF035K11+          TGTATCATGACATCCATCGAA                                       
JMFF041G07-           TGTATCATGACATCCATCG--AATATGTATTTTTTGGTTTTATTTTTGTGATGCTTCAGT
rJMFF048M20+          TGTATCATGACATCCATCGAAAATATGTATTTTTTGGTTTTATTTTTGTGATGCTTCAGT
rJMFF041G07+          TGTATCATGACATCCATCG--AATATGTATTTTTTGGTTTTATTTTTGTGATGCTTCAGT
rJMFF048C20+          TGTATCATGACATCCATCGAAAATATGTATTTTTTGGTTTTATTTTTGTGATGCTTCAGT
                      ____________________________________________________________
consensus             TGTATCATGACATCCATCGAAAATATGTATTTTTTGGTTTTATTTTTGTGATGCTTCAGT
 
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JMFF041G07-           TTACATTTTCCTCCTCTGATCTAGCTGACCTATCAGAATATGGAAGGGTCTTTAATGGTT
rJMFF048M20+          TTACATTTTCCTCCTCTGATCTAGCTGACCTATCAGAATATGGAAGGGTCTTTAATGGTT
rJMFF041G07+          TTACATTTTCCTCCTCTGATCTAGCTGACCTATCAGAATATGGAAGGGTCTTTAATGGTT
rJMFF048C20+          TTACATTTTCCTCCTCTGATCTAGCTGACCTATCAGAATATGGAAGGGTCTTTAATGGTT
                      ____________________________________________________________
consensus             TTACATTTTCCTCCTCTGATCTAGCTGACCTATCAGAATATGGAAGGGTCTTTAATGGTT
 
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JMFF041G07-           TGCTTGTGTATTGTACCAACATATGTTGTATACTGAGTAATCATTAAACTTGTTGTCTCA
rJMFF048M20+          TGCTTGTGTATTGTACCAACATATGTTGTATACTGAGTAATCATTAAACTTGTTGTCTCA
rJMFF041G07+          TGCTTGTGTATTGTACCAACATATGTTGTATACTGAGTAATCATTAAACTTGTTGTCTCA
rJMFF048C20+          TGCTTGTGTATTGTACCAACATATGTTGTATACTGAGTAATCATTAAACTTGTTGTCTCA
                      ____________________________________________________________
consensus             TGCTTGTGTATTGTACCAACATATGTTGTATACTGAGTAATCATTAAACTTGTTGTCTCA
 
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JMFF041G07-           GAAAACAATTCTGTTACAG                                         
rJMFF048M20+          GAAAACAATTCTGTTACAG                                         
rJMFF041G07+          GAAAACAATTCTGTTACAG                                         
rJMFF048C20+          GAAAACAATTCTGTTACAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             GAAAACAATTCTGTTACAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG