clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF025D21 | Sequence | 565 | 000782 (5) | ref|XP_011024933.1| | 5e-75 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus | 773 | 013830 (4) | ref|XP_009766230.1| | 9e-98 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris] |
JMFF046K08 | Sequence | 546 | 000782 (5) | gb|KDO66936.1| | 3e-114 | hypothetical protein CISIN_1g007799mg [Citrus sinensis] | 557 | 013830 (4) | ref|XP_009616367.1| | 6e-34 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like [Nicotiana toment |
JMSF027E02 | Sequence | 660 | 000782 (5) | ref|XP_011024933.1| | 2e-98 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus | 729 | 013830 (4) | ref|XP_009766230.1| | 2e-92 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris] |
JMSF046L02 | Sequence | 696 | 000782 (5) | ref|XP_011024933.1| | 2e-106 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 isoform X1 [Populus | 820 | 013830 (4) | ref|XP_009766230.1| | 8e-113 | PREDICTED: asparagine synthetase [glutamine-hydrolyzing] [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF046L02+ GTTAGAAGCCCGAGTCCCT
____________________________________________________________
consensus GTTAGAAGCCCGAGTCCCT
. : . : . : . : . : . :
rJMSF046L02+ TTTCTGGACAAGGAGTTCATCAATGTTGCCATGAACATTGACCCCGAATGGAAGATGATC
rJMFF025D21+ TGGAAGATGATC
____________________________________________________________
consensus TTTCTGGACAAGGAGTTCATCAATGTTGCCATGAACATTGACCCCGAATGGAAGATGATC
. : . : . : . : . : . :
rJMSF046L02+ AAACCCGAGGAGGGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
rJMSF027E02+ GGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
rJMFF025D21+ AAACCCGAGGAGGGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
____________________________________________________________
consensus AAACCCGAGGAGGGGCGGATGGAGAAGTGGATTCTTAGAAGGGCTTTTGATGATGAAGAG
. : . : . : . : . : . :
rJMSF046L02+ CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATTGCGTG
rJMSF027E02+ CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATTGCGTG
rJMFF025D21+ CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATGGCGTG
____________________________________________________________
consensus CATCCCTACCTCCCAAAGCATATTCTGTACAGGCAGAAGGAACAATTCAGCGATTGCGTG
. : . : . : . : . : . :
rJMSF046L02+ GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
rJMSF027E02+ GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
rJMFF025D21+ GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
____________________________________________________________
consensus GGGTATAGCTGGATCGATGGGCTGAAAGCTCACGCGGAGGAGCATGTGACCGACAAAATG
. : . : . : . : . : . :
rJMSF046L02+ ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
rJMSF027E02+ ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
rJMFF025D21+ ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
rJMFF046K08+ TCCAAGGAAGGTTACTAT
____________________________________________________________
consensus ATGCTCAATGCTGCACATATCTTCCCTCACAACACCCCGACTTCCAAGGAAGGTTACTAT
. : . : . : . : . : . :
rJMSF046L02+ TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
rJMSF027E02+ TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
rJMFF025D21+ TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
rJMFF046K08+ TACAGAATGATCTTCGAGA-GTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
____________________________________________________________
consensus TACAGAATGATCTTCGAGAGGTTCTTCCCACAGAACCCGGCTAGTCTTACTGTTCCAGGA
. : . : . : . : . : . :
rJMSF046L02+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
rJMSF027E02+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
rJMFF025D21+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
rJMFF046K08+ GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
____________________________________________________________
consensus GGGGCCAGTGTGGCATGCTCCACAGCCAAGGCAGTGGAGTGGGATGCTTCTTGGTCCAAG
. : . : . : . : . : . :
rJMSF046L02+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
rJMSF027E02+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
rJMFF025D21+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
rJMFF046K08+ AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
____________________________________________________________
consensus AATCTCGACCCGTCTGGCAGGGCTGCCATCGGGGTACATAATTCTGCATACGAGAACCAA
. : . : . : . : . : . :
rJMSF046L02+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
rJMSF027E02+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
rJMFF025D21+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
rJMFF046K08+ CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
____________________________________________________________
consensus CGGGCTGGTAATGGGAATTTGGCGACGACCAAGATTATTGACAATGTGCCGAGGATGATG
. : . : . : . : . : . :
rJMSF046L02+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
rJMSF027E02+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
rJMFF025D21+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
rJMFF046K08+ GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
____________________________________________________________
consensus GAAGTGACAGCGGCTACGGAGCTCACGATATGGAGCTAACATTGTTGGGAAGATTGTGTG
. : . : . : . : . : . :
rJMSF046L02+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
rJMSF027E02+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
rJMFF025D21+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
rJMFF046K08+ AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
____________________________________________________________
consensus AGATGCTTTGGGGTCTCTTCTCCTTGTCTGTGGTTATATGTTGTAGAGGGTTTGCAGCCT
. : . : . : . : . : . :
rJMSF046L02+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
rJMSF027E02+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
rJMFF025D21+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
rJMFF046K08+ GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
____________________________________________________________
consensus GTCTTTTAGATGTGGCTTATTAGGTTGTGTAAAATTATATTGTACCTTAAATAAGAGCAA
. : . : . : . : . : . :
rJMSF046L02+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
rJMSF027E02+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
rJMFF025D21+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
rJMFF046K08+ GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
____________________________________________________________
consensus GAGATCTTACTATGATCTGTCTGTCTTGTTCCTCCAAACAGTTCAATTGGATCCTACTTT
. : . : . : . : . : . :
rJMSF046L02+ GTACTGGTTTTAAGGCTTT
rJMSF027E02+ GTACTGGTTTTAAGGCTTT
rJMFF025D21+ GTACTGGTTTTAAGGCTTTTGTCACCATTGATAATGCATAT
rJMFF046K08+ GTACTGGTTTTAAGGCTTTTGTCACCATTGATAATGCATATATAGTTTTATCTTTCTGTC
____________________________________________________________
consensus GTACTGGTTTTAAGGCTTTTGTCACCATTGATAATGCATATATAGTTTTATCTTTCTGTC