Contig 013829:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046J19Sequence403013829 (3)gb|KDO54757.1|7e-36hypothetical protein CISIN_1g041037mg [Citrus sinensis]
JMSF012G10Sequence539013829 (3)ref|XP_004229759.1|3e-59PREDICTED: putative uncharacterized protein DDB_G0270496 [Solanum lycopersicum]781013829 (3)ref|XP_009796648.1|1e-97PREDICTED: putative uncharacterized protein DDB_G0270496 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF012G10-                             GGGCAGAGAGCAACTATGAAAGTCATGACACTGGTGAAGAAG
                      ____________________________________________________________
consensus                               GGGCAGAGAGCAACTATGAAAGTCATGACACTGGTGAAGAAG
 
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JMSF012G10-           ATGAGGATGAGGATGAGGATGAGGATGATGAAAGAGAAGGATGGAAACAGAATGAGGAGC
                      ____________________________________________________________
consensus             ATGAGGATGAGGATGAGGATGAGGATGATGAAAGAGAAGGATGGAAACAGAATGAGGAGC
 
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JMSF012G10-           AAAAGAATGCAGAAATGGAGGAGCTTGAGAATGAATATAGGAAGCTTCAGCACAAGGAGA
                      ____________________________________________________________
consensus             AAAAGAATGCAGAAATGGAGGAGCTTGAGAATGAATATAGGAAGCTTCAGCACAAGGAGA
 
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JMSF012G10-           AAGATCTACTAATTAATCTAACAAGCCATAAGGATGAAGATATTTTAAAAGGTGAAGCTG
                      ____________________________________________________________
consensus             AAGATCTACTAATTAATCTAACAAGCCATAAGGATGAAGATATTTTAAAAGGTGAAGCTG
 
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JMSF012G10-           TGAAAAACCAGAAGGTTCTTTGGGACAAGACTCTTGAGTTAAGATTCTTGCTGCAGAAAG
                      ____________________________________________________________
consensus             TGAAAAACCAGAAGGTTCTTTGGGACAAGACTCTTGAGTTAAGATTCTTGCTGCAGAAAG
 
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JMSF012G10-           CATTTTCAAACTCCAATAGACTTCCTCAGGAGCCAATAAAGTCTTCATTCTGTGATTATG
                      ____________________________________________________________
consensus             CATTTTCAAACTCCAATAGACTTCCTCAGGAGCCAATAAAGTCTTCATTCTGTGATTATG
 
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JMSF012G10-           GGGATGAAGTTAGTGAGGCATATTCAGATCTAATTGGTTCTTCAAAGAAGACTTTGGATT
                      ____________________________________________________________
consensus             GGGATGAAGTTAGTGAGGCATATTCAGATCTAATTGGTTCTTCAAAGAAGACTTTGGATT
 
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JMSF012G10-           CTATATTGGAATTACAGAAGGCACTTCTTGAGAAGAATCCATCAATTACTCAATCCACAG
rJMSF012G10+                                                              ATCCACAG
                      ____________________________________________________________
consensus             CTATATTGGAATTACAGAAGGCACTTCTTGAGAAGAATCCATCAATTACTCAATCCACAG
 
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JMSF012G10-           ATGGTTCTGTGGTTTCGGAAGCTTCTCATCAGTCCATTGACAAAAGTGATGAAGAATGGT
rJMSF012G10+          ATGGTTCTGTGGTTTCGGAAGCTTCTCATCAGTCCATTGACAAAAGTGATGAAGAATGGT
                      ____________________________________________________________
consensus             ATGGTTCTGTGGTTTCGGAAGCTTCTCATCAGTCCATTGACAAAAGTGATGAAGAATGGT
 
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JMSF012G10-           TGCAAATTACCCAAATG                                           
rJMSF012G10+          TGCAAATTACCCAAATGCATTCAAGAGACAAGTCAGTAGACAAATGGCAGAGGAGGGCCC
                      ____________________________________________________________
consensus             TGCAAATTACCCAAATGCATTCAAGAGACAAGTCAGTAGACAAATGGCAGAGGAGGGCCC
 
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rJMSF012G10+          AAGTAACAAGTGGTGCTGCTGCAGTTAAAGGCAAATTGCATGCGTTTAATCAGAGTATTA
                      ____________________________________________________________
consensus             AAGTAACAAGTGGTGCTGCTGCAGTTAAAGGCAAATTGCATGCGTTTAATCAGAGTATTA
 
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rJMSF012G10+          GTCAACAAGTGGGTAATTACATGAGAGATCCAAGTAAAATGATAAAGGGTATGCAGCTTA
                      ____________________________________________________________
consensus             GTCAACAAGTGGGTAATTACATGAGAGATCCAAGTAAAATGATAAAGGGTATGCAGCTTA
 
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rJMSF012G10+          GCAGATCTGCAGTTGCTCTATTTGGAACTGTTCCAGATCTTATAGCCACACAAGAGGAGG
                      ____________________________________________________________
consensus             GCAGATCTGCAGTTGCTCTATTTGGAACTGTTCCAGATCTTATAGCCACACAAGAGGAGG
 
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rJMSF012G10+          GCATAAATGCTGACGGCAACCCAGAACTTCTGGATGATTCCGATTTCTATCAGCAATTGC
                      ____________________________________________________________
consensus             GCATAAATGCTGACGGCAACCCAGAACTTCTGGATGATTCCGATTTCTATCAGCAATTGC
 
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rJMSF012G10+          TCAAGGAATTTTTTGAGACAATTGATCCAACTTCATCTGAGAAGGCATTTTACACCCTGA
rJMFF046J19+                           ACAATTGATCCAACTTCATCTGAGAAGGCATTTTACATCCTGA
                      ____________________________________________________________
consensus             TCAAGGAATTTTTTGAGACAATTGATCCAACTTCATCTGAGAAGGCATTTTACATCCTGA
 
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rJMSF012G10+          AAAGACTACAAACAAAGAAAAGAAAAATTGTTGACCGGCGAGCCTCAAAGAGTCGAAAAA
rJMFF046J19+          AAAGACTACAAACAAAGAAAAGAAAAATTGTTGACCGGCGAGCCTCAAAGAGTCGAAAAA
                      ____________________________________________________________
consensus             AAAGACTACAAACAAAGAAAAGAAAAATTGTTGACCGGCGAGCCTCAAAGAGTCGAAAAA
 
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rJMSF012G10+          TCAGATATAATGTACATGAAAAGATTGTGAATTTCATGGCTCCTCAGCCCGTGGAACTGC
rJMFF046J19+          TCAGATATAATGTACATGAAAAGATTGTGAATTTCATGGCTCCTCAGCCCGTGGAACTGC
                      ____________________________________________________________
consensus             TCAGATATAATGTACATGAAAAGATTGTGAATTTCATGGCTCCTCAGCCCGTGGAACTGC
 
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rJMSF012G10+          CTCCCATGGCCCCCAAGTTATTTGAGAACTTGTTTGGGTTTAGAACCCAGAACAAGCTGC
rJMFF046J19+          CTCCCATGGCCCCCAAGTTATTTGAGAACTTGTTTGGGTTTAGAACCCAGAACAAGCTGC
                      ____________________________________________________________
consensus             CTCCCATGGCCCCCAAGTTATTTGAGAACTTGTTTGGGTTTAGAACCCAGAACAAGCTGC
 
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rJMSF012G10+          TGGGTGAAGTATAATGTTACGGCGAGGCATTATTTGTTGTTGGGTTGTTTCAAATCAAAG
rJMFF046J19+          TGGGTGAAGTATAATGTTACGGCGAGGCATTATTTGTTGTTGGGTTGTTTCAAATCAAAG
                      ____________________________________________________________
consensus             TGGGTGAAGTATAATGTTACGGCGAGGCATTATTTGTTGTTGGGTTGTTTCAAATCAAAG
 
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rJMSF012G10+          ATGGTTTTCCAGAAGAATGAGAGTGAAAGACAATCAGAATTTTTGTATTCATTAAATTCA
rJMFF046J19+          GTGGTTTTCCAGAAGAATGAGAGTGAAAGACAATCAGAATTTTTGTATTCATTAAATTCA
                      ____________________________________________________________
consensus             GTGGTTTTCCAGAAGAATGAGAGTGAAAGACAATCAGAATTTTTGTATTCATTAAATTCA
 
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rJMSF012G10+          ATTTTGGTTGGATGAATTTCGTGAAAAATTAGCTTTT                       
rJMFF046J19+          ATTTTGGTTGGATGAATTTCGTGAAAAATTAGCTTTTTAAGAAAAGAAATTATACCAAAG
                      ____________________________________________________________
consensus             ATTTTGGTTGGATGAATTTCGTGAAAAATTAGCTTTTTAAGAAAAGAAATTATACCAAAG