Contig 013828:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046H02Sequence553012980 (3)ref|XP_009605686.1|1e-99PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Nicotiana tome458013828 (3)gb|EPS73521.1|1e-42hypothetical protein M569_01229, partial [Genlisea aurea]
JMFS069C08Sequence213013828 (3)
JMFS138E11Sequence613013828 (3)gb|EPS73521.1|9e-89hypothetical protein M569_01229, partial [Genlisea aurea]

Alignment

This contig is upended


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JMFS138E11+                            TTTCATGGGCCCGACATTCTACCAGCGGCTTACGCATATGGCT
                      ____________________________________________________________
consensus                              TTTCATGGGCCCGACATTCTACCAGCGGCTTACGCATATGGCT
 
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JMFS138E11+           GAGGACAAAGTGAAGTTCCGCAACACGGGCCCAGTCCATCCCCTTACCCCCCAACCCGTG
                      ____________________________________________________________
consensus             GAGGACAAAGTGAAGTTCCGCAACACGGGCCCAGTCCATCCCCTTACCCCCCAACCCGTG
 
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JMFS138E11+           GCTGACAGGAAACGCTTTGGTGGTATCAAATTCGGTGAGATGGAGCGCGACTGTCTCATA
                      ____________________________________________________________
consensus             GCTGACAGGAAACGCTTTGGTGGTATCAAATTCGGTGAGATGGAGCGCGACTGTCTCATA
 
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JMFS138E11+           GCACACGGTGCTGCTGCAAACCTGCACGAGCGACTCTTCACACTCAGTGATTCCTCCCAG
rJMFF046H02+                                TGCACGAGCGACTCTTCACACTCAGTGATTCCTCCCAG
                      ____________________________________________________________
consensus             GCACACGGTGCTGCTGCAAACCTGCACGAGCGACTCTTCACACTCAGTGATTCCTCCCAG
 
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JMFS138E11+           ATGCACATATGTAGAAAGTGCAAGAACATGGCCAATGTGATCCAACGGCCCGTGCTTGGT
rJMFF046H02+          ATGCACATATGTAGAAAGTGCAAGAACATGGCCAATGTGATCCAACGGCCCGTGCTTGGT
                      ____________________________________________________________
consensus             ATGCACATATGTAGAAAGTGCAAGAACATGGCCAATGTGATCCAACGGCCCGTGCTTGGT
 
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JMFS138E11+           GGGCGTAAGGTTAGGGGTCCCTACTGTCGTTTCTGTGAATCAGTAGAAGATATCGTGAAG
rJMFF046H02+          GGGCGTAAGGTTAGGGTTCCCTACTGTCGTTTCTGTGAATCAGTAGAAGATATCGTGAAG
                      ____________________________________________________________
consensus             GGGCGTAAGGTTAGGGTTCCCTACTGTCGTTTCTGTGAATCAGTAGAAGATATCGTGAAG
 
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JMFS138E11+           GTGAATGTGCCATACGGGGCGAAGCTGTTGTGTCAAGAGCTCTTCAGTATGGGGCTGTCT
rJMFF046H02+          GTGAATGTGCCATACGGGGCGAAGCTGTTGTGTCAAGAGCTCTTCAGTATGGGGCTGTCT
                      ____________________________________________________________
consensus             GTGAATGTGCCATACGGGGCGAAGCTGTTGTGTCAAGAGCTCTTCAGTATGGGGCTGTCT
 
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JMFS138E11+           TTGAAATTTGACACAGAAATTTCTTAAGATGTGTGTAGATTTAAGGATTGTGGAATAAGT
JMFS069C08+                                  TTAAGATGTGTGTAGATTTAAGGATTGTGGAATAAGT
rJMFF046H02+          TTGAAATTTGACACAGAAATTTCTTAAGATGTGTGTAGATTTAAGGATTGTGGAATAAGT
                      ____________________________________________________________
consensus             TTGAAATTTGACACAGAAATTTCTTAAGATGTGTGTAGATTTAAGGATTGTGGAATAAGT
 
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JMFS138E11+           GTAGGGTAAAACTTGTCCAGGTGAACAACCTTTTGAAACATTGTGATCTCTCTCCCCTAG
JMFS069C08+           GTAGGGTAAAACTTGTCCAGGTGAACAACCTTTTGAAACATTGTGATCTCTCTCCCCTAG
rJMFF046H02+          GTAGGGTAAAACTTGTCCAGGTGAACAACCTTTTGAAACATTGTGATCTCTCTCCCCTAG
                      ____________________________________________________________
consensus             GTAGGGTAAAACTTGTCCAGGTGAACAACCTTTTGAAACATTGTGATCTCTCTCCCCTAG
 
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JMFS138E11+           TTTGTCGCGCACAACATTAAAATGCTGTGTTTATTCTGATTCTGTTTTGGTTTTTGAA  
JMFS069C08+           TTTGTCGCGCACAACATTAAAATGCTGTGTTTATTCTGATTCTGTTTTGGTTTTTGAATG
rJMFF046H02+          TTTGTCGCGCACAACATTAAAATGCTGTGTTTATTCTGATTCTGTTTTGGTTTTTGAATG
                      ____________________________________________________________
consensus             TTTGTCGCGCACAACATTAAAATGCTGTGTTTATTCTGATTCTGTTTTGGTTTTTGAATG
 
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JMFS069C08+           AATGCAGTGTTTTTG                                             
rJMFF046H02+          AATGCAGTGTTTTTGAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AATGCAGTGTTTTTGAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG