Contig 013825:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002H22Sequence447002072 (10)emb|CDP09038.1|1e-23unnamed protein product [Coffea canephora]731013825 (10)emb|CDP09038.1|1e-45unnamed protein product [Coffea canephora]
JMFF003E15Sequence578002072 (10)emb|CDP09038.1|1e-38unnamed protein product [Coffea canephora]727013825 (10)emb|CDP09038.1|1e-45unnamed protein product [Coffea canephora]
JMFF005M18Sequence410002072 (10)726013825 (10)emb|CDP09038.1|7e-45unnamed protein product [Coffea canephora]
JMFF014H07Sequence632013825 (10)emb|CDP09038.1|4e-33unnamed protein product [Coffea canephora]
JMFF045O19Sequence614002072 (10)emb|CDP09038.1|6e-35unnamed protein product [Coffea canephora]624013825 (10)emb|CDP09038.1|8e-22unnamed protein product [Coffea canephora]
JMSF002N15Sequence114002072 (10)718013825 (10)emb|CDP09038.1|1e-51unnamed protein product [Coffea canephora]
JMSF004H22Sequence243002072 (10)426013825 (10)emb|CDP09038.1|7e-12unnamed protein product [Coffea canephora]
JMSF007G19Sequence110002072 (10)745013825 (10)emb|CDP09038.1|1e-45unnamed protein product [Coffea canephora]
JMSF046A01Sequence117002072 (10)747013825 (10)emb|CDP09038.1|2e-46unnamed protein product [Coffea canephora]
JMSF048C23Sequence112002072 (10)683013825 (10)emb|CDP09038.1|4e-34unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF002N15+                                                           TGGGCCTCCTA
                      ____________________________________________________________
consensus                                                              TGGGCCTCCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002N15+          GGTTTCTGTTCACAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
rJMFF002H22+                   TCACAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
rJMFF003E15+                    CACAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
rJMFF005M18+                      CAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
rJMSF007G19+                   TCACAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
rJMSF046A01+                   TCACAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
                      ____________________________________________________________
consensus             GGTTTCTGTTCACAATCAAAGAGGAAACCAAGGAGGATTTGGAGTCTGAGGATGGGAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF002N15+          CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
rJMFF002H22+          CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
rJMFF003E15+          CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
rJMFF005M18+          CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
rJMSF007G19+          CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
rJMSF048C23+                     TCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
rJMSF046A01+          CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
                      ____________________________________________________________
consensus             CTAGGAAGGGTTCCAGAACTAGGAGCTTGAGCCATGACCTTATGATTGGTGTTGAAACAC
 
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rJMSF002N15+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMFF002H22+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMFF003E15+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMFF005M18+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMSF007G19+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMSF048C23+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMSF046A01+          CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
rJMFF014H07+                            CTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
                      ____________________________________________________________
consensus             CATTGCTTTCCCCCCTGTCTTCACCTCCATTAAAGCCTCTGGCTTTGGAGTCTTACAGCC
 
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rJMSF002N15+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMFF002H22+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMFF003E15+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMFF005M18+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMSF007G19+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMSF048C23+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMSF046A01+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMFF014H07+          ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
rJMFF045O19+                                              CAGAAGCAGCCCTGAACAGGATGA
                      ____________________________________________________________
consensus             ACCATGGGCACTTCAACCCTCTGTTTGAGTCCTCAACAGAAGCAGCCCTGAACAGGATGA
 
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rJMSF002N15+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMFF002H22+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMFF003E15+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMFF005M18+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMSF004H22+                                       CTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMSF007G19+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMSF048C23+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMSF046A01+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMFF014H07+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
rJMFF045O19+          GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
                      ____________________________________________________________
consensus             GATCCTCTCCTCCTCCCAAGCTGAAGTTCCTGAGAGATGCTGAGGAGAAGCTGATTAAGA
 
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rJMSF002N15+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMFF002H22+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMFF003E15+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMFF005M18+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMSF004H22+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGNTCAGTCCAAGATTCTG
rJMSF007G19+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMSF048C23+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMSF046A01+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMFF014H07+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
rJMFF045O19+          GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTTTG
                      ____________________________________________________________
consensus             GGCTGGTTCAAGAAGCTGAGAAAAGGGCCCTCAGGAATGGTGGCTCAGTCCAAGATTCTG
 
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rJMSF002N15+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMFF002H22+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMFF003E15+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMFF005M18+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMSF004H22+          CACCCAAGCNTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMSF007G19+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMSF048C23+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMSF046A01+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMFF014H07+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
rJMFF045O19+          CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
                      ____________________________________________________________
consensus             CACCCAAGCCTTCTCCAAACTCAAATGGGGTCACTGAAGTGAAAGATGGCTCCTTTATGT
 
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rJMSF002N15+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMFF002H22+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMFF003E15+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMFF005M18+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMSF004H22+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMSF007G19+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMSF048C23+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMSF046A01+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMFF014H07+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
rJMFF045O19+          CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
                      ____________________________________________________________
consensus             CTTTTCTTGATAGTAGCAAAGCAACAGAGGTTTGAGACAAACAGTTTCCTGGTACCACCC
 
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rJMSF002N15+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMFF002H22+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMFF003E15+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMFF005M18+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMSF004H22+          ATNTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMSF007G19+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMSF048C23+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMSF046A01+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMFF014H07+          ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
rJMFF045O19+          ATTTCCTTCACAGGTACTCCCATTGCCTTTTTCTCCCCCAACATTCCTACCACTTGACAG
                      ____________________________________________________________
consensus             ATCTCCTTCACAGGTACTCCCATTGCCTTCTTCTCCCCCAACATTCCTACCACTTGACAG
 
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rJMSF002N15+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMFF002H22+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMFF003E15+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMFF005M18+          CAATTCTGGCACTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMSF004H22+          CAATTNTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMSF007G19+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMSF048C23+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMSF046A01+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMFF014H07+          CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
rJMFF045O19+          CAATTCTGGCATTTTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
                      ____________________________________________________________
consensus             CAATTCTGGCATTCTGCTATGCACTAGATCTCCAACATGGCTTAGATCATCCTCTTGTTT
 
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rJMSF002N15+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMFF002H22+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMFF003E15+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMFF005M18+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMSF004H22+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMSF007G19+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMSF048C23+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMSF046A01+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMFF014H07+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
rJMFF045O19+          CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
                      ____________________________________________________________
consensus             CTTCCATTAACCAAAGTTACAGAAATCTAGATTACACCCCCTTTCTTTTTTCCTTCTTTT
 
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rJMSF002N15+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTT             
rJMFF002H22+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
rJMFF003E15+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
rJMFF005M18+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
rJMSF004H22+          TAATTTATTGAATTGCTNGTAGGCCTTATTAGCAA                         
rJMSF007G19+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
rJMSF048C23+          TAATTTATTGAATTGCTTGTAGGCCATATTAGCAATTGTTTATGTNTNTCCTNTTCNGCT
rJMSF046A01+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
rJMFF014H07+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
rJMFF045O19+          TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
                      ____________________________________________________________
consensus             TAATTTATTGAATTGCTTGTAGGCCTTATTAGCAATTGTTTATGTTTTTCCTCTTCTGCT
 
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rJMFF002H22+          TCTAAATTTCTAAATCAAAA                                        
rJMFF003E15+          TCTAAATTTNTAAATCA                                           
rJMFF005M18+          TCTAAATT                                                    
rJMSF007G19+          TCTAAATTTCTAAATCAAAATCCT                                    
rJMSF048C23+          TCTAAATTTCTAAATCNAAATCCT                                    
rJMSF046A01+          TCTAAATTTCTAAATCAAAATCCT                                    
rJMFF014H07+          TCTAAATTTCTAAATCAAAATCCTTGTACAAAGTATCATGAGTTCCATTT          
rJMFF045O19+          TCTAAATTTCTAAATCAAAATCCTTGTACAAAGTATCATGAGTTCCATTTTATGCATGCT
                      ____________________________________________________________
consensus             TCTAAATTTCTAAATCAAAATCCTTGTACAAAGTATCATGAGTTCCATTTTATGCATGCT
 
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rJMFF045O19+          TTTGGCTTATTGGTGXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTTGGCTTATTGGTGNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG