Contig 013822:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+                             TTTTGTACTGTCAAAAATCGACTACATCTTCCGAGTTACAT
                      ____________________________________________________________
consensus                                TTTTGTACTGTCAAAAATCGACTACATCTTCCGAGTTACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          CATCCAGTGGTTTCGCATGAATATGGCAATGGACTGGCCATAGAGAGTGCCTGGATTGGA
                      ____________________________________________________________
consensus             CATCCAGTGGTTTCGCATGAATATGGCAATGGACTGGCCATAGAGAGTGCCTGGATTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          ACACGAGACTACAGCTCACAGATGGTTTTCCCCGAGGTGTTAGATTTTGTTAATAGGTTT
                      ____________________________________________________________
consensus             ACACGAGACTACAGCTCACAGATGGTTTTCCCCGAGGTGTTAGATTTTGTTAATAGGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          GAGGGCGGCATTGATGGAATTAGGAAGAGGAATCATGATGCTGTTGTCGAAATGGCAGAA
rJMFF045K24+                         GGAATTAGGAAGAGGAATCATGATGCTGTTGTCGAAATGGCAGAA
                      ____________________________________________________________
consensus             GAGGGCGGCATTGATGGAATTAGGAAGAGGAATCATGATGCTGTTGTCGAAATGGCAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          ATGTTAGCCAAGGCTTGGGGGACCAGGCTCGGGGCACCACCGGACATGTGCCCTAGCATG
rJMFF045K24+          ATGTTAGCCAAGGCTTGGGGGACCAGGCTCGGGGCACCACCGGACATGTGCCCTAGCATG
                      ____________________________________________________________
consensus             ATGTTAGCCAAGGCTTGGGGGACCAGGCTCGGGGCACCACCGGACATGTGCCCTAGCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          GCTATGATTGGTTTGCCCGCAAGCTTAGGAATTTTGACTAATGATGATGCTTCGAATATG
rJMFF045K24+          GCTATGATTGGTTTGCCCGCAAGCTTAGGAATTTTGACTAATGATGATGCTTCGAATATG
                      ____________________________________________________________
consensus             GCTATGATTGGTTTGCCCGCAAGCTTAGGAATTTTGACTAATGATGATGCTTCGAATATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          AGAACCCTTTTGAGAGACCGTTTTGGGGTGGAAGTACCAATCTATTACCAGGAACCAAAA
rJMFF045K24+          AGAACCCTTTTGAGAGACCGTTTTGGGGTGGAAGTACCAATCTATTACCAGGAACCAAAA
                      ____________________________________________________________
consensus             AGAACCCTTTTGAGAGACCGTTTTGGGGTGGAAGTACCAATCTATTACCAGGAACCAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          GATGGGGAATCACTTGGAACCATGGATGAGAATGGTTGTGTGACAGGATATGCTCGCATT
rJMFF045K24+          GTTGGGGAATCACTTGGAACCATGGATGAGAATGGTTGTGTGACAGGATATGCTCGCATT
                      ____________________________________________________________
consensus             GTTGGGGAATCACTTGGAACCATGGATGAGAATGGTTGTGTGACAGGATATGCTCGCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          TCTCATCAAATTTACAATACAGTTGATGATTACCTCAAGTTGAGGGATGCAATTAATCAA
rJMFF045K24+          TCTCATCAAATTTACAATACAGTTGATGATTACCTCAAGTTGAGGGATGCAATTAATCAA
                      ____________________________________________________________
consensus             TCTCATCAAATTTACAATACAGTTGATGATTACCTCAAGTTGAGGGATGCAATTAATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          CTTGTGCAAGAAAGGTTTACTTGCAAGGTTCTTCGTGCAGAATAAGAGGAATATAGTCTG
rJMFF045K24+          CTTGTGCAAGAAAGGTTTACTTGCAAGGTTCTTCGTGCAGAATAAGAGGAATATAGTCTG
                      ____________________________________________________________
consensus             CTTGTGCAAGAAAGGTTTACTTGCAAGGTTCTTCGTGCAGAATAAGAGGAATATAGTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          ATCTGTACTGTAGCAGCAGTTGCAAGCAATGGGCACTTGGATAATGTTAAAAAGCTGATG
rJMFF045K24+          ATCTGTACTGTAGCAGCAGTTGCAAGCAATGGGCACTTGGATAATGTTAAAAAGCTGATG
                      ____________________________________________________________
consensus             ATCTGTACTGTAGCAGCAGTTGCAAGCAATGGGCACTTGGATAATGTTAAAAAGCTGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          AGTTGTAACCAAAGGAGGATTCTCTTGGCAATGAAGAAGAATGTTAACTGGCTTTTCAGA
rJMFF045K24+          AGTTGTAACCAAAGGAGGATTCTCTTGGCAATGAAGAAGAATGTTAACTGGCTTTTCAGA
                      ____________________________________________________________
consensus             AGTTGTAACCAAAGGAGGATTCTCTTGGCAATGAAGAAGAATGTTAACTGGCTTTTCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          CCTTTTATGGTCACTTGTAACAATAAAAATTTTCAGTCTGTAATTGTTTGTGCAATTTTA
rJMFF045K24+          CCTTTTATGGTCACTTGTAACAATAAAAATTTTCAGTCTGTAATTGTTTGTGCAATTTTA
                      ____________________________________________________________
consensus             CCTTTTATGGTCACTTGTAACAATAAAAATTTTCAGTCTGTAATTGTTTGTGCAATTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF005H16+          ATCAGC                                                      
rJMFF045K24+          ATCAGCTGAAGGTGGAGTTTAGTTCGTTCATCCAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             ATCAGCTGAAGGTGGAGTTTAGTTCGTTCATCCAAAAAAAAAAAAAAAACTCTCCAGGGT