Contig 013820:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040M17Sequence622000229 (6)ref|XP_004252848.1|232PREDICTED: uncharacterized protein LOC101244563 [Solanum lycopersicum]734013820 (4)ref|XP_009618600.1|1e-66PREDICTED: uncharacterized protein LOC104110761 isoform X2 [Nicotiana tomentosi
JMFF045H17Sequence633000229 (6)ref|XP_004252848.1|239PREDICTED: uncharacterized protein LOC101244563 [Solanum lycopersicum]621013820 (4)ref|XP_009618600.1|2e-42PREDICTED: uncharacterized protein LOC104110761 isoform X2 [Nicotiana tomentosi
JMFF051I18Sequence619000229 (6)ref|XP_004252848.1|221PREDICTED: uncharacterized protein LOC101244563 [Solanum lycopersicum]601013820 (4)ref|XP_009618600.1|9e-49PREDICTED: uncharacterized protein LOC104110761 isoform X2 [Nicotiana tomentosi
JMSF007I21Sequence330000229 (6)ref|XP_009618599.1|1e-22PREDICTED: uncharacterized protein LOC104110761 isoform X1 [Nicotiana tomentosi714013820 (4)ref|XP_009618599.1|8e-67PREDICTED: uncharacterized protein LOC104110761 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF007I21+                                                        CCCAAGAGTCTGGA
rJMFF040M17+                                                     TTTCCCAAGAGTCTGGA
                      ____________________________________________________________
consensus                                                        TTTCCCAAGAGTCTGGA
 
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rJMSF007I21+          AATGGAACGTTTGTGCTGGCAAACTCGAACCAATCAATAATTAAAATGGAGAAACGCCCA
rJMFF040M17+          AATGGAACGTTTGTGCTGGCAAACTCGAACCAATCAATAATTAAAATGGAGAAACGCCCA
                      ____________________________________________________________
consensus             AATGGAACGTTTGTGCTGGCAAACTCGAACCAATCAATAATTAAAATGGAGAAACGCCCA
 
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rJMSF007I21+          GAAGCCGGAACAGATTCTGCCATCAAAGCCACCTTCAGATTCATACCAAAACCCACATCT
rJMFF051I18+                                                    ATACCAAAACNTACATCT
rJMFF040M17+          GAAGCCGGAACAGATTCTGCCATCAAAGCCACCTTCAGATTCATACCAAAACCCACATCT
                      ____________________________________________________________
consensus             GAAGCCGGAACAGATTCTGCCATCAAAGCCACCTTCAGATTCATACCAAAACCCACATCT
 
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rJMSF007I21+          AAAGTCTTCTCAGAACCCAAAGAATTCATAGGGCAGTCTATCATGCTGGAGCCATTTGAT
rJMFF051I18+          AAAGTCTTCTCAGAACCCAAAGAATTCATAGGGCAGTCTATCATGCTGGAGCCATTTGAT
rJMFF040M17+          AAAGTCTTCTCAGAACCCAAAGAATTCATAGGGCAGTCTATCATGCTGGAGCCATTTGAT
rJMFF045H17+                                                 ATCATGCTGGAGCCATTGATT
                      ____________________________________________________________
consensus             AAAGTCTTCTCAGAACCCAAAGAATTCATAGGGCAGTCTATCATGCTGGAGCCATTTGAT
 
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rJMSF007I21+          TACCCAGGAACACTAGTGAAGCAGTGGGGCAAAGGCGAAAGCATAGTGGTTGAAACATTC
rJMFF051I18+          TACCCAGGAACACTAGTGAAGCAGTGGGGCAAAGGCGAAAGCATAGTGGTTGAAACATTC
rJMFF040M17+          TACCCAGGAACACTAGTGAAGCAGTGGGGCAAAGGCGAAAGCATAGTGGTTGAAACATTC
rJMFF045H17+          TACCCAGGAACACTAGTGAAGCAGTGGGGCAAAGGCGAAAGCATAGTGGTTGAAACATTC
                      ____________________________________________________________
consensus             TACCCAGGAACACTAGTGAAGCAGTGGGGCAAAGGCGAAAGCATAGTGGTTGAAACATTC
 
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rJMSF007I21+          TCAGACGAGATCGAGAACGGCTCTTCTGAGTTTCGTTTGGTGAGTGGCTTAGACGGTAAG
rJMFF051I18+          TCAGACGAGATCGAGAACGGCTCTTCTGAGTTTCGTTTGGTGAGTGGCTTAGACGGTAAG
rJMFF040M17+          TCAGACGAGATCGAGAACGGCTCTTCTGAGTTTCGTTTGGTGAGTGGCTTAGACGGTAAG
rJMFF045H17+          TCAGACGAGATCGAGAACGGCTCTTCTGAGTTTCGTTTGGTGAGTGGCTTAGACGGTAAG
                      ____________________________________________________________
consensus             TCAGACGAGATCGAGAACGGCTCTTCTGAGTTTCGTTTGGTGAGTGGCTTAGACGGTAAG
 
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rJMSF007I21+          GATGACACAGTTTCCCTAGAGTCAGAAGAGCACGAAGGTTGCTTCATTTATAGCGGCGTC
rJMFF051I18+          GATGACACAGTTTCCCTAGAGTCAGAAGAGCACGAAGGTTGCTTCATTTATAGCGGCGTC
rJMFF040M17+          GATGACACAGTTTCCCTAGAGTCAGAAGAGCACGAAGGTTGCTTCATTTATAGCGGCGTC
rJMFF045H17+          GATGACACAGTTTCCCTAGAGTCAGAAGAGCACGAAGGTTGCTTCATTTATAGCGGCGTC
                      ____________________________________________________________
consensus             GATGACACAGTTTCCCTAGAGTCAGAAGAGCACGAAGGTTGCTTCATTTATAGCGGCGTC
 
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rJMSF007I21+          GACTATGAACCCGGTTTAGGTGTGAAGCTTGGCTGCAATGGTGAATACCCAGATGATGAT
rJMFF051I18+          GACTATGAACCCGGTTTAGGTGTGAAGCTTGGCTGCAATGGTGAATACCCAGATGATGAT
rJMFF040M17+          GACTATGAACCCGGTTTAGGTGTGAAGCTTGGCTGCAATGGTGAATACCCAGATGATGAT
rJMFF045H17+          GACTATGAACCCGGTTTAGGTGTGAAGCTTGGCTGCAATGGTGAATACCCAGATGATGAT
                      ____________________________________________________________
consensus             GACTATGAACCCGGTTTAGGTGTGAAGCTTGGCTGCAATGGTGAATACCCAGATGATGAT
 
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rJMSF007I21+          GCTTTCAAACGGGCTGCAAGCTTTAAACTGGAAACTGGGATCAGTCAATATCATCCTATC
rJMFF051I18+          GCTTTCAAACGGGCTGCAAGCTTTAAACTGGAAACTGGGATCAGTCAATATCATCCTATC
rJMFF040M17+          GCTTTCAAACGGGCTGCAAGCTTTAAACTGGAAACTGGGATCAGTCAATATCATCCTATC
rJMFF045H17+          GCTTTCAAACGGGCTGCAAGCTTTAAACTGGAAACTGGGATCAGTCAATATCATCCTATC
                      ____________________________________________________________
consensus             GCTTTCAAACGGGCTGCAAGCTTTAAACTGGAAACTGGGATCAGTCAATATCATCCTATC
 
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rJMSF007I21+          AGCTTTGTGGCAAAGGGAGGATCAGAAAGGAACTTCCTTTTGGTTCCATTATATAGTTTG
rJMFF051I18+          AGCTTTGTGGCAAAGGGAGGATCAGAAAGGAACTTCCTTTTGGTTCCATTATATAGTTTG
rJMFF040M17+          AGCTTTGTGGCAAAGGGAGGATCAGAAAGGAACTTCCTTTTGGTTCCATTATATAGTTTG
rJMFF045H17+          AGCTTTGTGGCAAAGGGAGGATCAGAAAGGAACTTCCTTTTGGTTCCATTATATAGTTTG
                      ____________________________________________________________
consensus             AGCTTTGTGGCAAAGGGAGGATCAGAAAGGAACTTCCTTTTGGTTCCATTATATAGTTTG
 
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rJMSF007I21+          AGAGATGAATCTTATACTGTGTATTTTAATATTCATGGTATAGGGCTGCCACCTGAATCT
rJMFF051I18+          AGAGATGAATCTTATACTGTGTATTTTAATATTCATGGTATAGGGCTGCCACCTGAATCT
rJMFF040M17+          AGAGATGAATCTTATACTGTGTATTTTAATATTCATGGTATAGGGCTGCCACCTGAATCT
rJMFF045H17+          AGAGATGAATCTTATACTGTGTATTTTAATATTCATGGTATAGGGCTGCCACCTGAATCT
                      ____________________________________________________________
consensus             AGAGATGAATCTTATACTGTGTATTTTAATATTCATGGTATAGGGCTGCCACCTGAATCT
 
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rJMSF007I21+          GAGCTTAAGTTGTCGGATCATTAACCGGGTAAATGACCGATTCAACGAAATCGTGGCCGA
rJMFF051I18+          GAGCTTAAGTTGTCGGATCATTAACCGGGTAAATGACCGATTCAACGAAATCGTGGCCGA
rJMFF040M17+          GAGCTTAAGTTGTCGGATCATTAACCGGGTAAATGACCGATTCAACGAAATCGTGGCCGA
rJMFF045H17+          GAGCTTAAGTTGTCGGATCATTAACCGGGTAAATGACCGATTCAACGAAATCGTGGCCGA
                      ____________________________________________________________
consensus             GAGCTTAAGTTGTCGGATCATTAACCGGGTAAATGACCGATTCAACGAAATCGTGGCCGA
 
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rJMSF007I21+          CCCGTTTTGTACATCAGTCGACTTCATAACATTACTTT                      
rJMFF051I18+          CCCGTTTTGTACATCAGTCGACTTCATAACATTACTTT                      
rJMFF040M17+          CCCGTTTTGTACATCAGTCGACTTCATAACATTACTTTTTGCCTCTCTAGAAGAACT   
rJMFF045H17+          CCCGTTTTGTACATCAGTCGACTTCATAACATTACTTTTTGCCTCTCTAGAAGAACTTAA
                      ____________________________________________________________
consensus             CCCGTTTTGTACATCAGTCGACTTCATAACATTACTTTTTGCCTCTCTAGAAGAACTTAA
 
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rJMFF045H17+          AATGCTAATATTTACTACTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AATGCTAATATTTACTACTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG