Contig 013819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016M15Sequence527013819 (6)ref|XP_009603243.1|1e-77PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Nicotiana tomentos704013819 (6)ref|XP_009603243.1|5e-84PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Nicotiana tomentos
JMFF041A08Sequence642013819 (6)ref|XP_009603243.1|5e-94PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Nicotiana tomentos533013819 (6)ref|XP_011074532.1|2e-82PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Sesamum indic
JMFF045H02Sequence587013819 (6)ref|XP_009603243.1|1e-83PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Nicotiana tomentos454013819 (6)ref|XP_009603243.1|3e-57PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Nicotiana tomentos

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF016M15- ATTTTCCACGTCTCTGCAAACCCTAA
JMFF041A08- TTCCACGTCTCTGCAAACCCTAA
JMFF045H02- TTCCACGTCTCTGCAAACCCTAA
rJMFF016M15+ TTCCACGTCTCTGCAAACCCTAA
                      ____________________________________________________________
consensus ATTTTCCACGTCTCTGCAAACCCTAA
 
. : . : . : . : . : . :
JMFF016M15- TTCCACTACTACTCTGCTCTTCAGCCACCCTCCCTCACGCACGAACAGTAATGGCCGAAA
JMFF041A08- TTCCACTACTACTCTGCTCTTCAGCCACCCTCCCTCACGCACGAACAGTAATGGCCGAAA
JMFF045H02- TTCCACTACTACTCTGCTCTTCAGCCACCCTCCCTCACGCACGAACAGTAATGGCCGAAA
rJMFF016M15+ TTCCACTACTACTCTGCTCTTCAGCCACCCTCCCTCACGCACGAACAGTAATGGCCGAAA
                      ____________________________________________________________
consensus TTCCACTACTACTCTGCTCTTCAGCCACCCTCCCTCACGCACGAACAGTAATGGCCGAAA
 
. : . : . : . : . : . :
JMFF016M15- ACAACTCTCCAGAGGCAGAGGTGGGAGAGCCGACGCCCAAGATTCCGAAGCTCGACCACC
JMFF041A08- ACAACTCTCCAGAGGCAGAGGTGGGAGAGCCGACGCCCAAGATTCCGAAGCTCGACCACC
JMFF045H02- ACAACTCTCCAGAGGCAGAGGTGGGAGAGCCGACGCCCAAGATTCCGAAGCTCGACCACC
rJMFF016M15+ ACAACTCTCCAGAGGCAGAGGTGGGAGAGCCGACGCCCAAGATTCCGAAGCTCGACCACC
                      ____________________________________________________________
consensus ACAACTCTCCAGAGGCAGAGGTGGGAGAGCCGACGCCCAAGATTCCGAAGCTCGACCACC
 
. : . : . : . : . : . :
JMFF016M15- ATC-AAAACGGTGCCGTTGCAGGATCCTCATATTTCAGAGTCAAGAAGCTCTCTGAGAAA
JMFF041A08- ATC-AAAACGGTGCCGTTGCAGGATCCTCATATTTCAGAGTCAAGAAGCTCTCTGAGAAA
JMFF045H02- ATC-AAAACGGTGCCGTTGCAGGATCCTCATATTTCAGAGTCAAGAAGCTCTCTGAGAAA
rJMFF041A08+ CCGTTGCAGGATCCTCATATTTCAGAGTCAAGAAGCTCTCTGAGAAA
rJMFF016M15+ ATCAAAAACGGTGCCGTTGCAGGATCCTCATATTTCAGAGTCAAGAAGCTCTCTGAGAAA
                      ____________________________________________________________
consensus ATC-AAAACGGTGCCGTTGCAGGATCCTCATATTTCAGAGTCAAGAAGCTCTCTGAGAAA
 
. : . : . : . : . : . :
JMFF016M15- GCCGTCTTGCCCTCTAGAGGTTCACCTCTCTCCGCTGGCTACGATCTCTCCAGTGCTGCT
JMFF041A08- GCCGTCTTGCCCTCTAGAGGTTCACCTCTCTCCGCTGGCTACGATCTCTCCAGTGCTGCT
JMFF045H02- GCCGTCTTGCCCTCTAGAGGTTCACCTCTCTCCGCTGGCTACGATCTCTCCAGTGCTGCT
rJMFF041A08+ GCCGTCTTGCCCTCTAGAGGTTCACCTCTCTCCGCTGGCTACGATCTCTCCAGTGCTGCT
rJMFF016M15+ GCCGTCTTGCCCTCTAGAGGTTCACCTCTCTCCGCTGGCTACGATCTCTCCAGTGCTGCT
                      ____________________________________________________________
consensus GCCGTCTTGCCCTCTAGAGGTTCACCTCTCTCCGCTGGCTACGATCTCTCCAGTGCTGCT
 
. : . : . : . : . : . :
JMFF016M15- GATACTAAGGTCCCTGGTAGGAGCAAGGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
JMFF041A08- GATACTAAGGTCCCTGGTAGGAGCAAGGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
JMFF045H02- GATACTAAGGTCCCTGGTAGGAGCAAGGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
rJMFF041A08+ GATACTAAGGTCCCTGGTAGGAGCAAGGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
rJMFF016M15+ GATACTAAGGTCCCTGGTAGGAGCAAGGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
rJMFF045H02+ GGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
                      ____________________________________________________________
consensus GATACTAAGGTCCCTGGTAGGAGCAAGGCCTTGATTCCCACCGACCTCAGTATCGCCGTA
 
. : . : . : . : . : . :
JMFF016M15- TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
JMFF041A08- TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
JMFF045H02- TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
rJMFF041A08+ TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
rJMFF016M15+ TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
rJMFF045H02+ TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
                      ____________________________________________________________
consensus TCGCCGGGAACCTATGCTCGTATTGCGCCGCGATCTGGATTGGCGTGGAAGCACTCAATA
 
. : . : . : . : . : . :
JMFF016M15- GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
JMFF041A08- GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
JMFF045H02- GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
rJMFF041A08+ GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
rJMFF016M15+ GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
rJMFF045H02+ GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
                      ____________________________________________________________
consensus GACGTGGGAGCAGGCGTGATTGATGCCGATTACAGAGGACCTGTTGGGGTGATATTGTTC
 
. : . : . : . : . : . :
JMFF016M15- AACCATTCTGATGCTGATTTTGAAGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
JMFF041A08- AACCATTCTGATGCTGATTTTGAGGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
JMFF045H02- AACCATTCTGATGCTGATTTTGAGGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
rJMFF041A08+ AACCATTCTGATGCTGATTTTGAGGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
rJMFF016M15+ AACCATTCTGATGCTGATTTTGAAGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
rJMFF045H02+ AACCATTCTGATGCTGATTTTGAGGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
                      ____________________________________________________________
consensus AACCATTCTGATGCTGATTTTGAGGTCAAGGTGGGTGATAGAATTGCACAGCTCATCATT
 
. : . : . : . : . : . :
JMFF016M15- GAGAAGATTGTAACGCCGGAGG
JMFF041A08- GAGAAGATTGTAACGCCGGAGGTTGAGGAGGTTGACGATCTTGATTCCACCGTTAGGGGA
JMFF045H02- GAGAAGATTGTAACGCCGGAGGTTGAGGAGGTTGACGATCTTGATT-CACCGTTAGGGGA
rJMFF041A08+ GAGAAGATTGTAACGCCGGAGGTTGAGGAGGTTGACGATCTTGATTCCACCGTTAGGGGA
rJMFF016M15+ GAGAAGATTGTAACGCCGGAGGTTGAGGAGGTTGACGATCTTGATTCCACCGTTAGGGGA
rJMFF045H02+ GAGAAGATTGTAACGCCGGAGGTTGAGGAGGTTGACGATCTTGATTCCACCGTTAGGGGA
                      ____________________________________________________________
consensus GAGAAGATTGTAACGCCGGAGGTTGAGGAGGTTGACGATCTTGATTCCACCGTTAGGGGA
 
. : . : . : . : . : . :
JMFF041A08- TCCGGCGGCTTTGGATCCACCGGAGTTTAATGCTATGCTAGTAGCCTAGTAGTACTAATA
JMFF045H02- TCCGGCGGCTTTGGATC
rJMFF041A08+ TCCGGCGGCTTTGGATCCACCGGAGTTTAATGCTATGCTAGTAGCCTAGTAGTACTAATA
rJMFF016M15+ TCCGGCGGCTTTGGATCCACCGGAGTTTAATGCTATGCTAGTAGCCTAGTAGTACTAATA
rJMFF045H02+ TCCGGCGGCTTTGGATCCACCGGAGTTTAATGCTATGCTAGTAGCCTAGTAGTACTAATA
                      ____________________________________________________________
consensus TCCGGCGGCTTTGGATCCACCGGAGTTTAATGCTATGCTAGTAGCCTAGTAGTACTAATA
 
. : . : . : . : . : . :
JMFF041A08- ATAATGTCTGTCAAACTA
rJMFF041A08+ ATAATGTCTGTCAAACTATCACAACTATTGAATATCTTTTCCGGAAAGTAATGGGAGACG
rJMFF016M15+ ATAATGTCTGTCAAACTATCACAACTATTGAATATCTTTTCCGGAATGTAATGGGAGACG
rJMFF045H02+ ATAATGTCTGTCAAACTATCACAACTATTGAATATCTTTTCCGGAATGTAATGGGAGACG
                      ____________________________________________________________
consensus ATAATGTCTGTCAAACTATCACAACTATTGAATATCTTTTCCGGAATGTAATGGGAGACG
 
. : . : . : . : . : . :
rJMFF041A08+ ATGGAG
rJMFF016M15+ ATGGAGTTTTTCTATATA
rJMFF045H02+ ATGGAGTTTTTCTATATATGAATGAAGGTAAAAAGTTATCCATCAAAAAAAAAAAAAAAG
                      ____________________________________________________________
consensus ATGGAGTTTTTCTATATATGAATGAAGGTAAAAAGTTATCCATCAAAAAAAAAAAAAAAG